RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 NFKBIBQ15653 356 aa10.9□□□□□ -0.66
TMEM39A-208ENST00000486159 CDC37Q16543 378 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-208ENST00000486159 SLC35G1Q2M3R5 365 aa10.9□□□□□ -0.66
TMEM39A-208ENST00000486159 NBPF20Q3BBV1 942 aa10.9□□□□□ -0.66
TMEM39A-208ENST00000486159 CYB5R4Q7L1T6 521 aa10.9□□□□□ -0.66
TMEM39A-208ENST00000486159 ADGRF4Q8IZF3 695 aa10.9□□□□□ -0.66
TMEM39A-208ENST00000486159 ENAHQ8N8S7 591 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-208ENST00000486159 PNMA1Q8ND90 353 aa10.9□□□□□ -0.66
TMEM39A-208ENST00000486159 INTS4Q96HW7 963 aaKnown RBP10.9□□□□□ -0.66
TMEM39A-208ENST00000486159 ZFP91Q96JP5 570 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-208ENST00000486159 TTC14Q96N46 770 aa10.9□□□□□ -0.66
TMEM39A-208ENST00000486159 ALDH8A1Q9H2A2 487 aaPredicted RBP10.9□□□□□ -0.66
TMEM39A-208ENST00000486159 SENP2Q9HC62 589 aa10.9□□□□□ -0.66
TMEM39A-208ENST00000486159 Q9Y3F1 56 aa10.9□□□□□ -0.66
TMEM39A-208ENST00000486159 SNX14Q9Y5W7 946 aa10.9□□□□□ -0.66
TMEM39A-208ENST00000486159 SORBS3O60504 671 aa10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 CABYRO75952 493 aa10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 FGBP02675 491 aa10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 NUCB2P80303 420 aa10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 PDE4DQ08499 809 aa10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 TTLL4Q14679 1199 aa10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 CCDC85BQ15834 202 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 LY6KQ17RY6 165 aa10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 QRICH1Q2TAL8 776 aa10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 SEPT14Q6ZU15 432 aa10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 DEFB128Q7Z7B8 93 aa10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 DGKHQ86XP1 1220 aa10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 HERVK_113Q902F9 699 aa10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 ESR2Q92731 530 aa10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 ZSCAN10Q96SZ4 725 aaPredicted RBP10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 JMJD4Q9H9V9 463 aa10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 ADD3Q9UEY8 706 aaKnown RBP10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 REV3LO60673 3130 aa10.89□□□□□ -0.67
TMEM39A-208ENST00000486159 TNKSO95271 1327 aa10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 RFXAPO00287 272 aa10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 OPLAHO14841 1288 aa10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 ZEB2O60315 1214 aa10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 PPP1R11O60927 126 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 GABBR2O75899 941 aa10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 ARHGEF15O94989 841 aa10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 CD2BP2O95400 341 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 TXNP10599 105 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 PTH1RQ03431 593 aa10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 CUL4AQ13619 759 aa10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 FAM47CQ5HY64 1035 aa10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 CHST3Q7LGC8 479 aa10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 SP7Q8TDD2 431 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 SYTL5Q8TDW5 730 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 ANKS1AQ92625 1134 aa10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 ZSCAN31Q96LW9 406 aaPredicted RBP10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 DSCC1Q9BVC3 393 aa10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 KAT14Q9H8E8 782 aa10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 RBM8AQ9Y5S9 174 aaKnown RBP10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 MYH6P13533 1939 aa10.88□□□□□ -0.67
TMEM39A-208ENST00000486159 WDR19Q8NEZ3 1342 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 TRIP12Q14669 1992 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 SCN10AQ9Y5Y9 1956 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 PDIA4P13667 645 aaKnown RBP10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 COL9A3Q14050 684 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 NBR1Q14596 966 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 GPNMBQ14956 572 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 PPP2R5BQ15173 497 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 ANKRD1Q15327 319 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 SEC23AQ15436 765 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 TCTN1Q2MV58 587 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 CREB3L3Q68CJ9 461 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 CCDC62Q6P9F0 684 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 PSRC1Q6PGN9 363 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 SPRED2Q7Z698 418 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 AFG1LQ8WV93 481 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 CTAGE1Q96RT6 745 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 MTG1Q9BT17 334 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 RNF41Q9H4P4 317 aaPredicted RBP10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 BCAS3Q9H6U6 928 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 ZSWIM6Q9HCJ5 1215 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 CYP46A1Q9Y6A2 500 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 CHD9Q3L8U1 2897 aa10.87□□□□□ -0.67
TMEM39A-208ENST00000486159 TMEM265A0A087WTH1 108 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 A6NJR5 290 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 ZBBXA8MT70 800 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 SLC27A2O14975 620 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 GALR2O43603 387 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 HMGB1P09429 215 aaKnown RBP10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 PCP11498 1178 aaKnown RBP10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 EIF2AK2P19525 551 aaKnown RBP10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 PSEN1P49768 467 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 ARHGAP1Q07960 439 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 HIC1Q14526 733 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 GPATCH4Q5T3I0 446 aaKnown RBP10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 CLEC17AQ6ZS10 378 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 TMCO2Q7Z6W1 182 aaPredicted RBP10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 DNERQ8NFT8 737 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 TET1Q8NFU7 2136 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 SCFD2Q8WU76 684 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 KAT2BQ92831 832 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 GPKOWQ92917 476 aaPredicted RBP eCLIP10.86□□□□□ -0.673e-8■■■■■ 71.9
TMEM39A-208ENST00000486159 TMX3Q96JJ7 454 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 GBP4Q96PP9 640 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 CERS4Q9HA82 394 aa10.86□□□□□ -0.67
TMEM39A-208ENST00000486159 SH2B1Q9NRF2 756 aaPredicted RBP10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms