RNA–Protein interactions for RNA: ENST00000485883.5

CHRD-215, Transcript of chordin, humanhuman

TSL 4

Gene CHRD, Length 568 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-215ENST00000485883 CERS4Q9HA82 394 aa23.7■■□□□ 1.38
CHRD-215ENST00000485883 CTNNA3Q9UI47 895 aa23.7■■□□□ 1.38
CHRD-215ENST00000485883 DDX41Q9UJV9 622 aaKnown RBP23.7■■□□□ 1.38
CHRD-215ENST00000485883 TET1Q8NFU7 2136 aa23.69■■□□□ 1.38
CHRD-215ENST00000485883 PPP1R11O60927 126 aaPredicted RBP23.69■■□□□ 1.38
CHRD-215ENST00000485883 ARHGEF15O94989 841 aa23.69■■□□□ 1.38
CHRD-215ENST00000485883 CFBP00751 764 aa23.69■■□□□ 1.38
CHRD-215ENST00000485883 ACTN1P12814 892 aa23.69■■□□□ 1.38
CHRD-215ENST00000485883 RFC2P35250 354 aa23.69■■□□□ 1.38
CHRD-215ENST00000485883 BFSP2Q13515 415 aa23.69■■□□□ 1.38
CHRD-215ENST00000485883 SEC23AQ15436 765 aa23.69■■□□□ 1.38
CHRD-215ENST00000485883 IFIT1BQ5T764 474 aaKnown RBP23.69■■□□□ 1.38
CHRD-215ENST00000485883 MICALL1Q8N3F8 863 aa23.69■■□□□ 1.38
CHRD-215ENST00000485883 ASB2Q96Q27 587 aa23.69■■□□□ 1.38
CHRD-215ENST00000485883 PXMP2Q9NR77 195 aa23.69■■□□□ 1.38
CHRD-215ENST00000485883 REV3LO60673 3130 aa23.69■■□□□ 1.38
CHRD-215ENST00000485883 NR3C2P08235 984 aa23.68■■□□□ 1.38
CHRD-215ENST00000485883 GPNMBQ14956 572 aa23.68■■□□□ 1.38
CHRD-215ENST00000485883 DHX38Q92620 1227 aaKnown RBP23.68■■□□□ 1.38
CHRD-215ENST00000485883 CNNM2Q9H8M5 875 aa23.68■■□□□ 1.38
CHRD-215ENST00000485883 EPOPA6NHQ4 379 aa23.67■■□□□ 1.38
CHRD-215ENST00000485883 GSPT1P15170 499 aaKnown RBP23.67■■□□□ 1.38
CHRD-215ENST00000485883 CASTP20810 708 aaKnown RBP23.67■■□□□ 1.38
CHRD-215ENST00000485883 PDE4AP27815 886 aa23.67■■□□□ 1.38
CHRD-215ENST00000485883 HSD17B4P51659 736 aa23.67■■□□□ 1.38
CHRD-215ENST00000485883 SLC35G1Q2M3R5 365 aa23.67■■□□□ 1.38
CHRD-215ENST00000485883 SESTD1Q86VW0 696 aa23.67■■□□□ 1.38
CHRD-215ENST00000485883 MTMR8Q96EF0 704 aa23.67■■□□□ 1.38
CHRD-215ENST00000485883 SLC9A7Q96T83 725 aa23.67■■□□□ 1.38
CHRD-215ENST00000485883 AMNQ9BXJ7 453 aa23.67■■□□□ 1.38
CHRD-215ENST00000485883 MAD2L2Q9UI95 211 aa23.67■■□□□ 1.38
CHRD-215ENST00000485883 XIRP2A4UGR9 3374 aa23.66■■□□□ 1.38
CHRD-215ENST00000485883 TRIP12Q14669 1992 aaPredicted RBP23.66■■□□□ 1.38
CHRD-215ENST00000485883 KLRF2D3W0D1 207 aa23.66■■□□□ 1.38
CHRD-215ENST00000485883 SORBS3O60504 671 aa23.66■■□□□ 1.38
CHRD-215ENST00000485883 EIF3JO75822 258 aaKnown RBP23.66■■□□□ 1.38
CHRD-215ENST00000485883 HDAC6Q9UBN7 1215 aa23.66■■□□□ 1.38
CHRD-215ENST00000485883 MRVI1Q9Y6F6 885 aa23.66■■□□□ 1.38
CHRD-215ENST00000485883 TANC1Q9C0D5 1861 aa23.66■■□□□ 1.38
CHRD-215ENST00000485883 MYH6P13533 1939 aa23.65■■□□□ 1.38
CHRD-215ENST00000485883 TNFRSF10AO00220 468 aa23.65■■□□□ 1.38
CHRD-215ENST00000485883 RGS20O76081 388 aa23.65■■□□□ 1.38
CHRD-215ENST00000485883 MRPS5P82675 430 aaKnown RBP23.65■■□□□ 1.38
CHRD-215ENST00000485883 DGKDQ16760 1214 aa23.65■■□□□ 1.38
CHRD-215ENST00000485883 HERC6Q8IVU3 1022 aa23.65■■□□□ 1.38
CHRD-215ENST00000485883 CAGE1Q8TC20 777 aa23.65■■□□□ 1.38
CHRD-215ENST00000485883 PHOSPHO2Q8TCD6 241 aa23.65■■□□□ 1.38
CHRD-215ENST00000485883 EMID1Q96A84 441 aaPredicted RBP23.65■■□□□ 1.38
CHRD-215ENST00000485883 ALG1Q9BT22 464 aa23.65■■□□□ 1.38
CHRD-215ENST00000485883 SENP2Q9HC62 589 aa23.65■■□□□ 1.38
CHRD-215ENST00000485883 GTF2IRD1Q9UHL9 959 aa23.65■■□□□ 1.38
CHRD-215ENST00000485883 KIAA1217Q5T5P2 1943 aa23.65■■□□□ 1.38
CHRD-215ENST00000485883 PALM3A6NDB9 673 aaPredicted RBP23.64■■□□□ 1.37
CHRD-215ENST00000485883 ZNF286BP0CG31 522 aa23.64■■□□□ 1.37
CHRD-215ENST00000485883 MYCLP12524 364 aaPredicted RBP23.64■■□□□ 1.37
CHRD-215ENST00000485883 HOXA13P31271 388 aaPredicted RBP23.64■■□□□ 1.37
CHRD-215ENST00000485883 PSEN2P49810 448 aa23.64■■□□□ 1.37
CHRD-215ENST00000485883 GHRHRQ02643 423 aa23.64■■□□□ 1.37
CHRD-215ENST00000485883 KRT40Q6A162 431 aa23.64■■□□□ 1.37
CHRD-215ENST00000485883 SPRED2Q7Z698 418 aa23.64■■□□□ 1.37
CHRD-215ENST00000485883 TMCO2Q7Z6W1 182 aaPredicted RBP23.64■■□□□ 1.37
CHRD-215ENST00000485883 IL31RAQ8NI17 732 aa23.64■■□□□ 1.37
CHRD-215ENST00000485883 AFAP1L1Q8TED9 768 aa23.64■■□□□ 1.37
CHRD-215ENST00000485883 ZFP91Q96JP5 570 aaPredicted RBP23.64■■□□□ 1.37
CHRD-215ENST00000485883 PDCD2LQ9BRP1 358 aa23.64■■□□□ 1.37
CHRD-215ENST00000485883 ZBTB5O15062 677 aa23.63■■□□□ 1.37
CHRD-215ENST00000485883 PTH1RQ03431 593 aa23.63■■□□□ 1.37
CHRD-215ENST00000485883 TAP1Q03518 808 aa23.63■■□□□ 1.37
CHRD-215ENST00000485883 TCTN1Q2MV58 587 aa23.63■■□□□ 1.37
CHRD-215ENST00000485883 LRRC8DQ7L1W4 858 aa23.63■■□□□ 1.37
CHRD-215ENST00000485883 HOMER1Q86YM7 354 aa23.63■■□□□ 1.37
CHRD-215ENST00000485883 ADAMTS19Q8TE59 1207 aa23.63■■□□□ 1.37
CHRD-215ENST00000485883 ARNTL2Q8WYA1 636 aa23.63■■□□□ 1.37
CHRD-215ENST00000485883 PCDHA1Q9Y5I3 950 aa23.63■■□□□ 1.37
CHRD-215ENST00000485883 MTCH2Q9Y6C9 303 aa23.63■■□□□ 1.37
CHRD-215ENST00000485883 TAF6LQ9Y6J9 622 aa23.63■■□□□ 1.37
CHRD-215ENST00000485883 PRRC2BQ5JSZ5 2229 aaKnown RBP23.62■■□□□ 1.37
CHRD-215ENST00000485883 NBNO60934 754 aa23.62■■□□□ 1.37
CHRD-215ENST00000485883 CKBP12277 381 aa23.62■■□□□ 1.37
CHRD-215ENST00000485883 SELPP16109 830 aa23.62■■□□□ 1.37
CHRD-215ENST00000485883 ZNF200P98182 395 aaPredicted RBP23.62■■□□□ 1.37
CHRD-215ENST00000485883 TFF2Q03403 129 aa23.62■■□□□ 1.37
CHRD-215ENST00000485883 LAMC2Q13753 1193 aa23.62■■□□□ 1.37
CHRD-215ENST00000485883 MFSD10Q14728 455 aa23.62■■□□□ 1.37
CHRD-215ENST00000485883 TTC22Q5TAA0 569 aa23.62■■□□□ 1.37
CHRD-215ENST00000485883 STOX1Q6ZVD7 989 aa23.62■■□□□ 1.37
CHRD-215ENST00000485883 DHX37Q8IY37 1157 aaKnown RBP23.62■■□□□ 1.37
CHRD-215ENST00000485883 CCDC155Q8N6L0 562 aa23.62■■□□□ 1.37
CHRD-215ENST00000485883 C7orf31Q8N865 590 aa23.62■■□□□ 1.37
CHRD-215ENST00000485883 PPTC7Q8NI37 304 aa23.62■■□□□ 1.37
CHRD-215ENST00000485883 WNT8BQ93098 351 aa23.62■■□□□ 1.37
CHRD-215ENST00000485883 HAS3O00219 553 aa23.61■■□□□ 1.37
CHRD-215ENST00000485883 BAIAP3O94812 1187 aa23.61■■□□□ 1.37
CHRD-215ENST00000485883 F2P00734 622 aa23.61■■□□□ 1.37
CHRD-215ENST00000485883 CYP21A2P08686 494 aa23.61■■□□□ 1.37
CHRD-215ENST00000485883 WDR5P61964 334 aaKnown RBP23.61■■□□□ 1.37
CHRD-215ENST00000485883 HIC1Q14526 733 aa23.61■■□□□ 1.37
CHRD-215ENST00000485883 KIAA0753Q2KHM9 967 aa23.61■■□□□ 1.37
CHRD-215ENST00000485883 GPKOWQ92917 476 aaPredicted RBP eCLIP23.61■■□□□ 1.37
CHRD-215ENST00000485883 PIGSQ96S52 555 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms