RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 TOX2Q96NM4 488 aa21.23■□□□□ 0.99
COL1A1-206ENST00000485870 TMEM39AQ9NV64 488 aa21.23■□□□□ 0.99
COL1A1-206ENST00000485870 MROH7Q68CQ1 1323 aa21.23■□□□□ 0.99
COL1A1-206ENST00000485870 A0A1W2PPC1 479 aa21.22■□□□□ 0.99
COL1A1-206ENST00000485870 CDC27P30260 824 aa21.22■□□□□ 0.99
COL1A1-206ENST00000485870 CCND2P30279 289 aa21.22■□□□□ 0.99
COL1A1-206ENST00000485870 METAP2P50579 478 aaKnown RBP eCLIP21.22■□□□□ 0.99
COL1A1-206ENST00000485870 FAAP100Q0VG06 881 aa21.22■□□□□ 0.99
COL1A1-206ENST00000485870 ITGA7Q13683 1181 aa21.22■□□□□ 0.99
COL1A1-206ENST00000485870 BRDTQ58F21 947 aaPredicted RBP21.22■□□□□ 0.99
COL1A1-206ENST00000485870 VSIG10LQ86VR7 867 aa21.22■□□□□ 0.99
COL1A1-206ENST00000485870 FAM217BQ9NTX9 383 aaPredicted RBP21.22■□□□□ 0.99
COL1A1-206ENST00000485870 POLR3EQ9NVU0 708 aa21.22■□□□□ 0.99
COL1A1-206ENST00000485870 MRVI1Q9Y6F6 885 aa21.22■□□□□ 0.99
COL1A1-206ENST00000485870 LAMA3Q16787 3333 aa21.22■□□□□ 0.99
COL1A1-206ENST00000485870 MEIS2O14770 477 aa21.21■□□□□ 0.99
COL1A1-206ENST00000485870 RGS20O76081 388 aa21.21■□□□□ 0.99
COL1A1-206ENST00000485870 GH1P01241 217 aa21.21■□□□□ 0.99
COL1A1-206ENST00000485870 RCAN1P53805 252 aa21.21■□□□□ 0.99
COL1A1-206ENST00000485870 PURAQ00577 322 aaKnown RBP21.21■□□□□ 0.99
COL1A1-206ENST00000485870 FUT2Q10981 343 aa21.21■□□□□ 0.99
COL1A1-206ENST00000485870 BADQ92934 168 aa21.21■□□□□ 0.99
COL1A1-206ENST00000485870 PSTPIP2Q9H939 334 aa21.21■□□□□ 0.99
COL1A1-206ENST00000485870 A6NJR5 290 aa21.2■□□□□ 0.98
COL1A1-206ENST00000485870 KIAA0355O15063 1070 aa21.2■□□□□ 0.98
COL1A1-206ENST00000485870 RAG1P15918 1043 aa21.2■□□□□ 0.98
COL1A1-206ENST00000485870 ITGB8P26012 769 aa21.2■□□□□ 0.98
COL1A1-206ENST00000485870 ADD1P35611 737 aaKnown RBP21.2■□□□□ 0.98
COL1A1-206ENST00000485870 ARHGAP1Q07960 439 aa21.2■□□□□ 0.98
COL1A1-206ENST00000485870 WWC2Q6AWC2 1192 aa21.2■□□□□ 0.98
COL1A1-206ENST00000485870 RUFY3Q7L099 469 aa21.2■□□□□ 0.98
COL1A1-206ENST00000485870 FAM126BQ8IXS8 530 aa21.2■□□□□ 0.98
COL1A1-206ENST00000485870 AFG1LQ8WV93 481 aa21.2■□□□□ 0.98
COL1A1-206ENST00000485870 DDX41Q9UJV9 622 aaKnown RBP21.2■□□□□ 0.98
COL1A1-206ENST00000485870 V9GY48 417 aaPredicted RBP21.2■□□□□ 0.98
COL1A1-206ENST00000485870 GRIN2DO15399 1336 aa21.2■□□□□ 0.98
COL1A1-206ENST00000485870 FRMPD4Q14CM0 1322 aa21.2■□□□□ 0.98
COL1A1-206ENST00000485870 PIK3CDO00329 1044 aa21.19■□□□□ 0.98
COL1A1-206ENST00000485870 TLR3O15455 904 aaKnown RBP21.19■□□□□ 0.98
COL1A1-206ENST00000485870 UBE2SQ16763 222 aa21.19■□□□□ 0.98
COL1A1-206ENST00000485870 TDHQ8IZJ6 230 aa21.19■□□□□ 0.98
COL1A1-206ENST00000485870 FBXL16Q8N461 479 aa21.19■□□□□ 0.98
COL1A1-206ENST00000485870 SLC43A3Q8NBI5 491 aa21.19■□□□□ 0.98
COL1A1-206ENST00000485870 MTG1Q9BT17 334 aaPredicted RBP21.19■□□□□ 0.98
COL1A1-206ENST00000485870 AGXT2Q9BYV1 514 aa21.19■□□□□ 0.98
COL1A1-206ENST00000485870 ZSWIM6Q9HCJ5 1215 aa21.19■□□□□ 0.98
COL1A1-206ENST00000485870 CYP46A1Q9Y6A2 500 aa21.19■□□□□ 0.98
COL1A1-206ENST00000485870 MYH7BA7E2Y1 1941 aa21.18■□□□□ 0.98
COL1A1-206ENST00000485870 CCDC196A0A1B0GTZ2 297 aa21.18■□□□□ 0.98
COL1A1-206ENST00000485870 SORBS3O60504 671 aa21.18■□□□□ 0.98
COL1A1-206ENST00000485870 NAPAP54920 295 aa21.18■□□□□ 0.98
COL1A1-206ENST00000485870 UPF3BQ9BZI7 483 aaKnown RBP21.18■□□□□ 0.98
COL1A1-206ENST00000485870 TBX21Q9UL17 535 aa21.18■□□□□ 0.98
COL1A1-206ENST00000485870 KPNA6O60684 536 aa21.17■□□□□ 0.98
COL1A1-206ENST00000485870 MMP3P08254 477 aa21.17■□□□□ 0.98
COL1A1-206ENST00000485870 MRPS9P82933 396 aaKnown RBP21.17■□□□□ 0.98
COL1A1-206ENST00000485870 KCNV1Q6PIU1 500 aa21.17■□□□□ 0.98
COL1A1-206ENST00000485870 DHX37Q8IY37 1157 aaKnown RBP21.17■□□□□ 0.98
COL1A1-206ENST00000485870 PPP1R13LQ8WUF5 828 aa21.17■□□□□ 0.98
COL1A1-206ENST00000485870 RTEL1Q9NZ71 1219 aa21.17■□□□□ 0.98
COL1A1-206ENST00000485870 SCN10AQ9Y5Y9 1956 aa21.17■□□□□ 0.98
COL1A1-206ENST00000485870 NID2Q14112 1375 aa21.16■□□□□ 0.98
COL1A1-206ENST00000485870 CD4P01730 458 aa21.16■□□□□ 0.98
COL1A1-206ENST00000485870 CHMP4BP1P59074 171 aa21.16■□□□□ 0.98
COL1A1-206ENST00000485870 TOB2Q14106 344 aaPredicted RBP21.16■□□□□ 0.98
COL1A1-206ENST00000485870 GNPTABQ3T906 1256 aa21.16■□□□□ 0.98
COL1A1-206ENST00000485870 TYW1BQ6NUM6 668 aa21.16■□□□□ 0.98
COL1A1-206ENST00000485870 SEZ6LQ9BYH1 1024 aa21.16■□□□□ 0.98
COL1A1-206ENST00000485870 TM6SF1Q9BZW5 370 aa21.16■□□□□ 0.98
COL1A1-206ENST00000485870 TRPV6Q9H1D0 765 aa21.16■□□□□ 0.98
COL1A1-206ENST00000485870 STXBP3O00186 592 aa21.15■□□□□ 0.98
COL1A1-206ENST00000485870 SOX1O00570 391 aaPredicted RBP21.15■□□□□ 0.98
COL1A1-206ENST00000485870 STAM2O75886 525 aa21.15■□□□□ 0.98
COL1A1-206ENST00000485870 SLC34A2O95436 690 aa21.15■□□□□ 0.98
COL1A1-206ENST00000485870 GGPS1O95749 300 aa21.15■□□□□ 0.98
COL1A1-206ENST00000485870 UBA1P22314 1058 aaKnown RBP21.15■□□□□ 0.98
COL1A1-206ENST00000485870 LAMC2Q13753 1193 aa21.15■□□□□ 0.98
COL1A1-206ENST00000485870 NBPF20Q3BBV1 942 aa21.15■□□□□ 0.98
COL1A1-206ENST00000485870 FAM47CQ5HY64 1035 aa21.15■□□□□ 0.98
COL1A1-206ENST00000485870 PCNX4Q63HM2 1172 aa21.15■□□□□ 0.98
COL1A1-206ENST00000485870 PPP1R18Q6NYC8 613 aa21.15■□□□□ 0.98
COL1A1-206ENST00000485870 EMID1Q96A84 441 aaPredicted RBP21.15■□□□□ 0.98
COL1A1-206ENST00000485870 LARP6Q9BRS8 491 aaKnown RBP21.15■□□□□ 0.98
COL1A1-206ENST00000485870 PPP1R12CQ9BZL4 782 aa21.15■□□□□ 0.98
COL1A1-206ENST00000485870 ALDH8A1Q9H2A2 487 aaPredicted RBP21.15■□□□□ 0.98
COL1A1-206ENST00000485870 SZT2Q5T011 3432 aa21.14■□□□□ 0.98
COL1A1-206ENST00000485870 SPDYE3A6NKU9 549 aa21.14■□□□□ 0.97
COL1A1-206ENST00000485870 hCG_1984214I3L0E3 225 aa21.14■□□□□ 0.97
COL1A1-206ENST00000485870 B4GALT4O60513 344 aa21.14■□□□□ 0.97
COL1A1-206ENST00000485870 TIMP1P01033 207 aa21.14■□□□□ 0.97
COL1A1-206ENST00000485870 PDIA3P30101 505 aaKnown RBP21.14■□□□□ 0.97
COL1A1-206ENST00000485870 ADCY7P51828 1080 aa21.14■□□□□ 0.97
COL1A1-206ENST00000485870 CCT2P78371 535 aaKnown RBP21.14■□□□□ 0.97
COL1A1-206ENST00000485870 SP2Q02086 613 aa21.14■□□□□ 0.97
COL1A1-206ENST00000485870 CELF3Q5SZQ8 465 aaKnown RBP21.14■□□□□ 0.97
COL1A1-206ENST00000485870 ZNF713Q8N859 430 aaPredicted RBP21.14■□□□□ 0.97
COL1A1-206ENST00000485870 PPTC7Q8NI37 304 aa21.14■□□□□ 0.97
COL1A1-206ENST00000485870 INPP4AQ96PE3 977 aaPredicted RBP21.14■□□□□ 0.97
COL1A1-206ENST00000485870 NCOA5Q9HCD5 579 aaKnown RBP21.14■□□□□ 0.97
COL1A1-206ENST00000485870 BARHL2Q9NY43 387 aa21.14■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms