RNA–Protein interactions for RNA: ENST00000485065.1

TRUB1-202, Transcript of TruB pseudouridine synthase family member 1, humanhuman

TSL 2

Gene TRUB1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-202ENST00000485065 ANKS1AQ92625 1134 aa11.65□□□□□ -0.54
TRUB1-202ENST00000485065 EDAQ92838 391 aa11.65□□□□□ -0.54
TRUB1-202ENST00000485065 ZDHHC16Q969W1 377 aa11.65□□□□□ -0.54
TRUB1-202ENST00000485065 PABPC5Q96DU9 382 aaKnown RBP11.65□□□□□ -0.54
TRUB1-202ENST00000485065 POP1Q99575 1024 aaKnown RBP11.65□□□□□ -0.54
TRUB1-202ENST00000485065 SIP14410 1827 aa11.65□□□□□ -0.55
TRUB1-202ENST00000485065 SCN10AQ9Y5Y9 1956 aa11.65□□□□□ -0.55
TRUB1-202ENST00000485065 FAM186AA6NE01 2351 aa11.64□□□□□ -0.55
TRUB1-202ENST00000485065 TANC1Q9C0D5 1861 aa11.64□□□□□ -0.55
TRUB1-202ENST00000485065 LINC01553A4QN01 128 aa11.64□□□□□ -0.55
TRUB1-202ENST00000485065 GOLGA8CPA6NN73 597 aa11.64□□□□□ -0.55
TRUB1-202ENST00000485065 EFCAB14O75071 495 aa11.64□□□□□ -0.55
TRUB1-202ENST00000485065 ZFYP08048 801 aaPredicted RBP11.64□□□□□ -0.55
TRUB1-202ENST00000485065 RASA1P20936 1047 aa11.64□□□□□ -0.55
TRUB1-202ENST00000485065 PDE1AP54750 535 aa11.64□□□□□ -0.55
TRUB1-202ENST00000485065 PURAQ00577 322 aaKnown RBP11.64□□□□□ -0.55
TRUB1-202ENST00000485065 CNTN2Q02246 1040 aa11.64□□□□□ -0.55
TRUB1-202ENST00000485065 PTPROQ16827 1216 aa11.64□□□□□ -0.55
TRUB1-202ENST00000485065 TIGD5Q53EQ6 642 aa11.64□□□□□ -0.55
TRUB1-202ENST00000485065 TAPT1Q6NXT6 567 aa11.64□□□□□ -0.55
TRUB1-202ENST00000485065 GIMAP6Q6P9H5 292 aa11.64□□□□□ -0.55
TRUB1-202ENST00000485065 CPXCR1Q8N123 301 aa11.64□□□□□ -0.55
TRUB1-202ENST00000485065 GPATCH3Q96I76 525 aa11.64□□□□□ -0.55
TRUB1-202ENST00000485065 CTDP1Q9Y5B0 961 aaPredicted RBP11.64□□□□□ -0.55
TRUB1-202ENST00000485065 ABHD14A-ACY1A0A1B0GW23 586 aa11.63□□□□□ -0.55
TRUB1-202ENST00000485065 PATL2C9JE40 543 aaKnown RBP11.63□□□□□ -0.55
TRUB1-202ENST00000485065 H3BQ06 376 aaPredicted RBP11.63□□□□□ -0.55
TRUB1-202ENST00000485065 NCK2O43639 380 aa11.63□□□□□ -0.55
TRUB1-202ENST00000485065 DUSP28Q4G0W2 176 aa11.63□□□□□ -0.55
TRUB1-202ENST00000485065 IFNL3Q8IZI9 196 aa11.63□□□□□ -0.55
TRUB1-202ENST00000485065 CAGE1Q8TC20 777 aa11.63□□□□□ -0.55
TRUB1-202ENST00000485065 MTG1Q9BT17 334 aaPredicted RBP11.63□□□□□ -0.55
TRUB1-202ENST00000485065 RAVER2Q9HCJ3 691 aaKnown RBP11.63□□□□□ -0.55
TRUB1-202ENST00000485065 VTA1Q9NP79 307 aa11.63□□□□□ -0.55
TRUB1-202ENST00000485065 NYAP2Q9P242 653 aa11.63□□□□□ -0.55
TRUB1-202ENST00000485065 SUPT16HQ9Y5B9 1047 aaKnown RBP11.63□□□□□ -0.55
TRUB1-202ENST00000485065 TRIP12Q14669 1992 aaPredicted RBP11.63□□□□□ -0.55
TRUB1-202ENST00000485065 IGKV6D-41A0A0C4DH26 115 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 SOWAHBA6NEL2 793 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 PROB1E7EW31 1015 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 F5H6K3 240 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 KPNA6O60684 536 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 CPT1AP50416 773 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 KLRC3Q07444 240 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 AAMPQ13685 434 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 SMAD2Q15796 467 aaKnown RBP11.62□□□□□ -0.55
TRUB1-202ENST00000485065 CNKSR3Q6P9H4 555 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 CCDC155Q8N6L0 562 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 MORC4Q8TE76 937 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 AFAP1L1Q8TED9 768 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 SAMD11Q96NU1 681 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 LNPKQ9C0E8 428 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 ACAD9Q9H845 621 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 PDGFCQ9NRA1 345 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 FEM1BQ9UK73 627 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 SYNPO2Q9UMS6 1093 aa11.62□□□□□ -0.55
TRUB1-202ENST00000485065 C5orf42Q9H799 3197 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 MINDY4BA8MYZ0 360 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 RAD21O60216 631 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 NDUFB10O96000 172 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 CXCL10P02778 98 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 SLC4A3P48751 1232 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 NUCB1Q02818 461 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 RBL2Q08999 1139 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 GPNMBQ14956 572 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 NBPF20Q3BBV1 942 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 TKFCQ3LXA3 575 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 VPS53Q5VIR6 699 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 B4GALNT3Q6L9W6 998 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 TRIM67Q6ZTA4 783 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 RNF135Q8IUD6 432 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 SUGP1Q8IWZ8 645 aaKnown RBP11.61□□□□□ -0.55
TRUB1-202ENST00000485065 AMOTL1Q8IY63 956 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 STK11IPQ8N1F8 1099 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 BANK1Q8NDB2 785 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 PBXIP1Q96AQ6 731 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 NUP88Q99567 741 aaPredicted RBP11.61□□□□□ -0.55
TRUB1-202ENST00000485065 FSD1Q9BTV5 496 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 ALG13Q9NP73 1137 aaKnown RBP11.61□□□□□ -0.55
TRUB1-202ENST00000485065 A1CFQ9NQ94 594 aaKnown RBP11.61□□□□□ -0.55
TRUB1-202ENST00000485065 INCENPQ9NQS7 918 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 ARPP21Q9UBL0 812 aaPredicted RBP11.61□□□□□ -0.55
TRUB1-202ENST00000485065 MUTYHQ9UIF7 546 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 MTUS1Q9ULD2 1270 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 INSL6Q9Y581 213 aa11.61□□□□□ -0.55
TRUB1-202ENST00000485065 MYO7AQ13402 2215 aa11.6□□□□□ -0.55
TRUB1-202ENST00000485065 CACNA1BQ00975 2339 aa11.6□□□□□ -0.55
TRUB1-202ENST00000485065 LOC102724159A0A0B4J2E5 919 aa11.6□□□□□ -0.55
TRUB1-202ENST00000485065 TMEM221A6NGB7 291 aa11.6□□□□□ -0.55
TRUB1-202ENST00000485065 M0R296 226 aa11.6□□□□□ -0.55
TRUB1-202ENST00000485065 PRDM1O75626 825 aa11.6□□□□□ -0.55
TRUB1-202ENST00000485065 PTGS1P23219 599 aa11.6□□□□□ -0.55
TRUB1-202ENST00000485065 DEFB103AP81534 67 aa11.6□□□□□ -0.55
TRUB1-202ENST00000485065 PWP2Q15269 919 aaKnown RBP11.6□□□□□ -0.55
TRUB1-202ENST00000485065 BRDTQ58F21 947 aaPredicted RBP11.6□□□□□ -0.55
TRUB1-202ENST00000485065 KIAA1211Q6ZU35 1233 aa11.6□□□□□ -0.55
TRUB1-202ENST00000485065 PLEKHM2Q8IWE5 1019 aa11.6□□□□□ -0.55
TRUB1-202ENST00000485065 FBXL6Q8N531 539 aa11.6□□□□□ -0.55
TRUB1-202ENST00000485065 KIFC2Q96AC6 838 aa11.6□□□□□ -0.55
TRUB1-202ENST00000485065 FAM227BQ96M60 508 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms