RNA–Protein interactions for RNA: ENST00000485055.5

CCDC39-205, Transcript of coiled-coil domain containing 39, humanhuman

TSL 1 (best)

Gene CCDC39, Length 2,874 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-205ENST00000485055 NIF3L1Q9GZT8 377 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 RBSNQ9H1K0 784 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 PI4KBQ9UBF8 816 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 ACAD8Q9UKU7 415 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 AGTPBP1Q9UPW5 1226 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 FAM50BQ9Y247 325 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 ALPK3Q96L96 1907 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 BTBD19C9JJ37 291 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 MYCLP1P12525 358 aaPredicted RBP6.12□□□□□ -1.43
CCDC39-205ENST00000485055 CAP2P40123 477 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 BTDP43251 543 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 RGS3P49796 1198 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 NEK2P51955 445 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 LACTBP83111 547 aaPredicted RBP6.12□□□□□ -1.43
CCDC39-205ENST00000485055 APOBRQ0VD83 1088 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 SIRT2Q8IXJ6 389 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 ZNF713Q8N859 430 aaPredicted RBP6.12□□□□□ -1.43
CCDC39-205ENST00000485055 USP6NLQ92738 828 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 PARK7Q99497 189 aaKnown RBP6.12□□□□□ -1.43
CCDC39-205ENST00000485055 RIOK1Q9BRS2 568 aaKnown RBP6.12□□□□□ -1.43
CCDC39-205ENST00000485055 CDH19Q9H159 772 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 DDX4Q9NQI0 724 aaKnown RBP6.12□□□□□ -1.43
CCDC39-205ENST00000485055 DNAAF2Q9NVR5 837 aaKnown RBP6.12□□□□□ -1.43
CCDC39-205ENST00000485055 DBNLQ9UJU6 430 aaKnown RBP6.12□□□□□ -1.43
CCDC39-205ENST00000485055 PLIN4Q96Q06 1357 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 CCL15-CCL14A0A0B4J2E2 113 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 PABPN1LA6NDY0 278 aaKnown RBP6.12□□□□□ -1.43
CCDC39-205ENST00000485055 ERICH4A6NGS2 130 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 TIMM10P62072 90 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 MLLT1Q03111 559 aaPredicted RBP6.12□□□□□ -1.43
CCDC39-205ENST00000485055 PABPC4Q13310 644 aaKnown RBP eCLIP6.12□□□□□ -1.43
CCDC39-205ENST00000485055 MTMR1Q13613 665 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 UBE3CQ15386 1083 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 CCL15Q16663 113 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 OR8H2Q8N162 312 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 ANKLE1Q8NAG6 615 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 EAF2Q96CJ1 260 aaPredicted RBP6.12□□□□□ -1.43
CCDC39-205ENST00000485055 R3HDMLQ9H3Y0 253 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 DCTPP1Q9H773 170 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 EFR3BQ9Y2G0 817 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 SALL3Q9BXA9 1300 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 SYNRGQ9UMZ2 1314 aa6.12□□□□□ -1.43
CCDC39-205ENST00000485055 LRRC37A2A6NM11 1700 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 TCP10L2B9ZVM9 353 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 HOXD10P28358 340 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 PIK3CAP42336 1068 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 NFIAQ12857 509 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 GRM1Q13255 1194 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 SBK1Q52WX2 424 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 FAM43AQ8N2R8 423 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.11□□□□□ -1.43
CCDC39-205ENST00000485055 RHPN1Q8TCX5 695 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 FBF1Q8TES7 1133 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 SNX21Q969T3 373 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 ANAPC16Q96DE5 110 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 WRNIP1Q96S55 665 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 HAUS7Q99871 368 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 HINFPQ9BQA5 517 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 C2orf49Q9BVC5 232 aaPredicted RBP6.11□□□□□ -1.43
CCDC39-205ENST00000485055 ELP3Q9H9T3 547 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 VEZTQ9HBM0 779 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 SH3GLB2Q9NR46 395 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 TSKSQ9UJT2 592 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 RABL2BQ9UNT1 228 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 MAGED1Q9Y5V3 778 aaPredicted RBP6.11□□□□□ -1.43
CCDC39-205ENST00000485055 DDTLA6NHG4 134 aaPredicted RBP6.11□□□□□ -1.43
CCDC39-205ENST00000485055 ZMYM6O95789 1325 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 FDX1P10109 184 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 NCAM1P13591 858 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 STAT3P40763 770 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 NOVP48745 357 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 ATP2B2Q01814 1243 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 GOLGB1Q14789 3259 aaKnown RBP6.11□□□□□ -1.43
CCDC39-205ENST00000485055 FAM110CQ1W6H9 321 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 ENAHQ8N8S7 591 aaPredicted RBP6.11□□□□□ -1.43
CCDC39-205ENST00000485055 FRS2Q8WU20 508 aa6.11□□□□□ -1.43
CCDC39-205ENST00000485055 IPCEF1Q8WWN9 437 aaPredicted RBP6.11□□□□□ -1.43
CCDC39-205ENST00000485055 FLT1P17948 1338 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 TTC41PQ6P2S7 1318 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 TBC1D8O95759 1140 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 KCNA2P16389 499 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 RBM5P52756 815 aaKnown RBP eCLIP6.1□□□□□ -1.43
CCDC39-205ENST00000485055 PSMC1P62191 440 aaKnown RBP6.1□□□□□ -1.43
CCDC39-205ENST00000485055 TUBB8Q3ZCM7 444 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 DZIP1Q86YF9 867 aaKnown RBP6.1□□□□□ -1.43
CCDC39-205ENST00000485055 CDAN1Q8IWY9 1227 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 SLAIN1Q8ND83 568 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 TTC14Q96N46 770 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 KIAA1683Q9H0B3 1180 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 SRRDQ9UH36 339 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 PNMA3Q9UL41 463 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 ADAMTS5Q9UNA0 930 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 ECEL1O95672 775 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 ASNSP08243 561 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 CHAF1AQ13111 956 aaPredicted RBP6.1□□□□□ -1.43
CCDC39-205ENST00000485055 PIN1Q13526 163 aaPredicted RBP6.1□□□□□ -1.43
CCDC39-205ENST00000485055 PRAMEF18Q5VWM3 479 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 MMS22LQ6ZRQ5 1243 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 ZFPM1Q8IX07 1006 aa6.1□□□□□ -1.43
CCDC39-205ENST00000485055 SH3KBP1Q96B97 665 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms