RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 SEMA3FQ13275 785 aa18.75■□□□□ 0.59
CTSA-207ENST00000484855 DHX8Q14562 1220 aaKnown RBP18.75■□□□□ 0.59
CTSA-207ENST00000484855 CPXCR1Q8N123 301 aa18.75■□□□□ 0.59
CTSA-207ENST00000484855 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.75■□□□□ 0.592e-13■■□□□ 14
CTSA-207ENST00000484855 CCDC47Q96A33 483 aaKnown RBP18.75■□□□□ 0.59
CTSA-207ENST00000484855 RAVER2Q9HCJ3 691 aaKnown RBP18.75■□□□□ 0.59
CTSA-207ENST00000484855 GDAQ9Y2T3 454 aa18.75■□□□□ 0.59
CTSA-207ENST00000484855 CBFA2T2O43439 604 aa18.75■□□□□ 0.59
CTSA-207ENST00000484855 CLCN1P35523 988 aa18.75■□□□□ 0.59
CTSA-207ENST00000484855 CCT6AP40227 531 aaKnown RBP18.75■□□□□ 0.59
CTSA-207ENST00000484855 HMGCS2P54868 508 aa18.75■□□□□ 0.59
CTSA-207ENST00000484855 STX17P56962 302 aa18.75■□□□□ 0.59
CTSA-207ENST00000484855 ASIC1P78348 528 aa18.75■□□□□ 0.59
CTSA-207ENST00000484855 MCM6Q14566 821 aa18.75■□□□□ 0.59
CTSA-207ENST00000484855 SULF1Q8IWU6 871 aa18.75■□□□□ 0.59
CTSA-207ENST00000484855 RAD54LQ92698 747 aa18.75■□□□□ 0.59
CTSA-207ENST00000484855 C12orf42Q96LP6 360 aa18.75■□□□□ 0.59
CTSA-207ENST00000484855 FAM20AQ96MK3 541 aa18.75■□□□□ 0.59
CTSA-207ENST00000484855 KCNF1Q9H3M0 494 aa18.75■□□□□ 0.59
CTSA-207ENST00000484855 C19orf81C9J6K1 198 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 ZBED4O75132 1171 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 RHOBTB3O94955 611 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 ALAS1P13196 640 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 ZNF18P17022 549 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 HSD17B4P51659 736 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 UBASH3AP57075 661 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 CCDC144BQ3MJ40 725 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 HSP90AA4PQ58FG1 418 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 SPATA1Q5VX52 437 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 NT5C3AQ9H0P0 336 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 ADM5C9JUS6 153 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 MSH4O15457 936 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 SLC26A4O43511 780 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 USP2O75604 605 aaPredicted RBP18.74■□□□□ 0.59
CTSA-207ENST00000484855 STAT3P40763 770 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 ECM1Q16610 540 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 HYIQ5T013 277 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 MCF2L2Q86YR7 1114 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 CYP2W1Q8TAV3 490 aa18.74■□□□□ 0.59
CTSA-207ENST00000484855 NFIBO00712 420 aa18.73■□□□□ 0.59
CTSA-207ENST00000484855 FDX1P10109 184 aa18.73■□□□□ 0.59
CTSA-207ENST00000484855 CDK11BP21127 795 aaKnown RBP18.73■□□□□ 0.59
CTSA-207ENST00000484855 UBXN2AP68543 259 aa18.73■□□□□ 0.59
CTSA-207ENST00000484855 PAK1Q13153 545 aa18.73■□□□□ 0.59
CTSA-207ENST00000484855 HAUS3Q68CZ6 603 aa18.73■□□□□ 0.59
CTSA-207ENST00000484855 CLEC4DQ8WXI8 215 aa18.73■□□□□ 0.59
CTSA-207ENST00000484855 SAMSN1Q9NSI8 373 aaKnown RBP18.73■□□□□ 0.59
CTSA-207ENST00000484855 EXOC1Q9NV70 894 aa18.73■□□□□ 0.59
CTSA-207ENST00000484855 PNMA2Q9UL42 364 aa18.73■□□□□ 0.59
CTSA-207ENST00000484855 IGLV3-22A0A075B6J6 115 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 SPIRE1Q08AE8 756 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 NCAPH2Q6IBW4 605 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 DPY19L2Q6NUT2 758 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 KCNK18Q7Z418 384 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 FILIP1Q7Z7B0 1213 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 ERMNQ8TAM6 284 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 NELFBQ8WX92 580 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 ATG4CQ96DT6 458 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 HOMER2Q9NSB8 354 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 RWDD2AQ9UIY3 292 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 VWA5AO00534 786 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 ZNF500O60304 480 aaPredicted RBP18.72■□□□□ 0.59
CTSA-207ENST00000484855 PRCPP42785 496 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 PDE4DQ08499 809 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 DLK2Q6UY11 383 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 GIMAP8Q8ND71 665 aaPredicted RBP18.72■□□□□ 0.59
CTSA-207ENST00000484855 LRRC27Q9C0I9 530 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 TMOD4Q9NZQ9 345 aa18.72■□□□□ 0.59
CTSA-207ENST00000484855 POTEB3A0JP26 581 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 MYMKA6NI61 221 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 POTECB2RU33 542 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 STIM1Q13586 685 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 TPD52L1Q16890 204 aaPredicted RBP18.71■□□□□ 0.59
CTSA-207ENST00000484855 POTEBQ6S5H4 581 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 TMC6Q7Z403 805 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 MAPK8IP1Q9UQF2 711 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 AFG3L2Q9Y4W6 797 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 MAP3K9P80192 1104 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 GHRHRQ02643 423 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 VGLL4Q14135 290 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 MUM1L1Q5H9M0 696 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 ADSSL1Q8N142 457 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 L3MBTL3Q96JM7 780 aaPredicted RBP18.71■□□□□ 0.59
CTSA-207ENST00000484855 IMPACTQ9P2X3 320 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 VAV3Q9UKW4 847 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 KIAA1024Q9UPX6 916 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 RABGAP1Q9Y3P9 1069 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 STK24Q9Y6E0 443 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 SNCAIPQ9Y6H5 919 aa18.71■□□□□ 0.59
CTSA-207ENST00000484855 SRCAPQ6ZRS2 3230 aa18.71■□□□□ 0.58
CTSA-207ENST00000484855 CEP55Q53EZ4 464 aa18.7■□□□□ 0.58
CTSA-207ENST00000484855 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.7■□□□□ 0.58
CTSA-207ENST00000484855 KRT26Q7Z3Y9 468 aa18.7■□□□□ 0.58
CTSA-207ENST00000484855 WNK4Q96J92 1243 aa18.7■□□□□ 0.58
CTSA-207ENST00000484855 GTPBP4Q9BZE4 634 aaKnown RBP18.7■□□□□ 0.58
CTSA-207ENST00000484855 SCN4AP35499 1836 aa18.7■□□□□ 0.58
CTSA-207ENST00000484855 PPP1R12BO60237 982 aaPredicted RBP18.69■□□□□ 0.58
CTSA-207ENST00000484855 MED24O75448 989 aa18.69■□□□□ 0.58
CTSA-207ENST00000484855 SETQ01105 290 aaPredicted RBP18.69■□□□□ 0.58
CTSA-207ENST00000484855 CNNM4Q6P4Q7 775 aa18.69■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms