RNA–Protein interactions for RNA: ENST00000484520.1

SPTA1-206, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 769 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-206ENST00000484520 MINPP1Q9UNW1 487 aa5.68□□□□□ -1.5
SPTA1-206ENST00000484520 PCDHA5Q9Y5H7 936 aa5.68□□□□□ -1.5
SPTA1-206ENST00000484520 TTC21AQ8NDW8 1320 aa5.68□□□□□ -1.5
SPTA1-206ENST00000484520 MYOM1P52179 1685 aa5.67□□□□□ -1.5
SPTA1-206ENST00000484520 BUB1BO60566 1050 aaPredicted RBP5.67□□□□□ -1.5
SPTA1-206ENST00000484520 PRKCAP17252 672 aa5.67□□□□□ -1.5
SPTA1-206ENST00000484520 TMEM62Q0P6H9 643 aa5.67□□□□□ -1.5
SPTA1-206ENST00000484520 LAPTM5Q13571 262 aa5.67□□□□□ -1.5
SPTA1-206ENST00000484520 MPP2Q14168 576 aa5.67□□□□□ -1.5
SPTA1-206ENST00000484520 ZXDCQ2QGD7 858 aaPredicted RBP5.67□□□□□ -1.5
SPTA1-206ENST00000484520 SPATS1Q496A3 300 aa5.67□□□□□ -1.5
SPTA1-206ENST00000484520 SNAP47Q5SQN1 464 aa5.67□□□□□ -1.5
SPTA1-206ENST00000484520 REC114Q7Z4M0 266 aa5.67□□□□□ -1.5
SPTA1-206ENST00000484520 FRMD5Q7Z6J6 570 aa5.67□□□□□ -1.5
SPTA1-206ENST00000484520 MORC1Q86VD1 984 aa5.67□□□□□ -1.5
SPTA1-206ENST00000484520 GOLM1Q8NBJ4 401 aa5.67□□□□□ -1.5
SPTA1-206ENST00000484520 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.67□□□□□ -1.5
SPTA1-206ENST00000484520 POLR3AO14802 1390 aaPredicted RBP5.67□□□□□ -1.5
SPTA1-206ENST00000484520 ANKRD33BA6NCL7 494 aa5.66□□□□□ -1.5
SPTA1-206ENST00000484520 MINDY4BA8MYZ0 360 aa5.66□□□□□ -1.5
SPTA1-206ENST00000484520 TLR3O15455 904 aaKnown RBP5.66□□□□□ -1.5
SPTA1-206ENST00000484520 SIGLEC6O43699 453 aa5.66□□□□□ -1.5
SPTA1-206ENST00000484520 CYP4F8P98187 520 aa5.66□□□□□ -1.5
SPTA1-206ENST00000484520 EFEMP1Q12805 493 aa5.66□□□□□ -1.5
SPTA1-206ENST00000484520 CC2D1BQ5T0F9 858 aaKnown RBP5.66□□□□□ -1.5
SPTA1-206ENST00000484520 FAM161BQ96MY7 647 aa5.66□□□□□ -1.5
SPTA1-206ENST00000484520 RSRP1Q9BUV0 290 aa5.66□□□□□ -1.5
SPTA1-206ENST00000484520 PRDM14Q9GZV8 571 aa5.66□□□□□ -1.5
SPTA1-206ENST00000484520 PNNQ9H307 717 aaKnown RBP5.66□□□□□ -1.5
SPTA1-206ENST00000484520 AATKQ6ZMQ8 1374 aa5.66□□□□□ -1.5
SPTA1-206ENST00000484520 CD163L1Q9NR16 1453 aa5.65□□□□□ -1.5
SPTA1-206ENST00000484520 LRRC7Q96NW7 1537 aa5.65□□□□□ -1.5
SPTA1-206ENST00000484520 MEIS1O00470 390 aa5.65□□□□□ -1.5
SPTA1-206ENST00000484520 FFAR3O14843 346 aa5.65□□□□□ -1.5
SPTA1-206ENST00000484520 PRICKLE3O43900 615 aaPredicted RBP5.65□□□□□ -1.5
SPTA1-206ENST00000484520 ATF3P18847 181 aa5.65□□□□□ -1.5
SPTA1-206ENST00000484520 PPP2R1AP30153 589 aa5.65□□□□□ -1.5
SPTA1-206ENST00000484520 POLR2BP30876 1174 aaKnown RBP5.65□□□□□ -1.5
SPTA1-206ENST00000484520 RTP5Q14D33 572 aa5.65□□□□□ -1.5
SPTA1-206ENST00000484520 WDR43Q15061 677 aaKnown RBP eCLIP5.65□□□□□ -1.5
SPTA1-206ENST00000484520 NUP43Q8NFH3 380 aa5.65□□□□□ -1.5
SPTA1-206ENST00000484520 PNISRQ8TF01 805 aaKnown RBP5.65□□□□□ -1.5
SPTA1-206ENST00000484520 COG3Q96JB2 828 aa5.65□□□□□ -1.5
SPTA1-206ENST00000484520 ZNF512BQ96KM6 892 aaPredicted RBP5.65□□□□□ -1.5
SPTA1-206ENST00000484520 TNFRSF12AQ9NP84 129 aa5.65□□□□□ -1.5
SPTA1-206ENST00000484520 ERVK13-1Q9NX77 482 aa5.65□□□□□ -1.5
SPTA1-206ENST00000484520 MSH6P52701 1360 aa5.65□□□□□ -1.51
SPTA1-206ENST00000484520 KIF24Q5T7B8 1368 aa5.65□□□□□ -1.51
SPTA1-206ENST00000484520 USP6P35125 1406 aa5.65□□□□□ -1.51
SPTA1-206ENST00000484520 INSRRP14616 1297 aa5.64□□□□□ -1.51
SPTA1-206ENST00000484520 LIMS1P48059 325 aa5.64□□□□□ -1.51
SPTA1-206ENST00000484520 KCNC1P48547 511 aa5.64□□□□□ -1.51
SPTA1-206ENST00000484520 CBX2Q14781 532 aaPredicted RBP5.64□□□□□ -1.51
SPTA1-206ENST00000484520 RPTNQ6XPR3 784 aa5.64□□□□□ -1.51
SPTA1-206ENST00000484520 SLCO6A1Q86UG4 719 aa5.64□□□□□ -1.51
SPTA1-206ENST00000484520 CDADC1Q9BWV3 514 aa5.64□□□□□ -1.51
SPTA1-206ENST00000484520 CHST7Q9NS84 486 aa5.64□□□□□ -1.51
SPTA1-206ENST00000484520 ACSL6Q9UKU0 697 aa5.64□□□□□ -1.51
SPTA1-206ENST00000484520 NUDCQ9Y266 331 aa5.64□□□□□ -1.51
SPTA1-206ENST00000484520 ITSN1Q15811 1721 aa5.64□□□□□ -1.51
SPTA1-206ENST00000484520 ZBED9Q6R2W3 1325 aa5.64□□□□□ -1.51
SPTA1-206ENST00000484520 MED1Q15648 1581 aaPredicted RBP5.63□□□□□ -1.51
SPTA1-206ENST00000484520 TOPAZ1Q8N9V7 1692 aa5.63□□□□□ -1.51
SPTA1-206ENST00000484520 CHD2O14647 1828 aaKnown RBP5.63□□□□□ -1.51
SPTA1-206ENST00000484520 A0A1W2PQ45 241 aaPredicted RBP5.63□□□□□ -1.51
SPTA1-206ENST00000484520 A0A1W2PQY0 241 aa5.63□□□□□ -1.51
SPTA1-206ENST00000484520 FYB1O15117 783 aa5.63□□□□□ -1.51
SPTA1-206ENST00000484520 GARTP22102 1010 aa5.63□□□□□ -1.51
SPTA1-206ENST00000484520 SLURP1P55000 103 aa5.63□□□□□ -1.51
SPTA1-206ENST00000484520 XPCQ01831 940 aaPredicted RBP5.63□□□□□ -1.51
SPTA1-206ENST00000484520 PWP1Q13610 501 aa5.63□□□□□ -1.51
SPTA1-206ENST00000484520 FAM196AQ6ZSG2 479 aa5.63□□□□□ -1.51
SPTA1-206ENST00000484520 TMC4Q7Z404 712 aa5.63□□□□□ -1.51
SPTA1-206ENST00000484520 NGDNQ8NEJ9 315 aaKnown RBP5.63□□□□□ -1.51
SPTA1-206ENST00000484520 BRMS1Q9HCU9 246 aa5.63□□□□□ -1.51
SPTA1-206ENST00000484520 GMIPQ9P107 970 aa5.63□□□□□ -1.51
SPTA1-206ENST00000484520 IMPACTQ9P2X3 320 aa5.63□□□□□ -1.51
SPTA1-206ENST00000484520 PCDHB14Q9Y5E9 798 aa5.63□□□□□ -1.51
SPTA1-206ENST00000484520 ACEP12821 1306 aa5.63□□□□□ -1.51
SPTA1-206ENST00000484520 SMG6Q86US8 1419 aaKnown RBP5.63□□□□□ -1.51
SPTA1-206ENST00000484520 CLEC3AO75596 197 aa5.62□□□□□ -1.51
SPTA1-206ENST00000484520 ENDOUP21128 410 aaKnown RBP5.62□□□□□ -1.51
SPTA1-206ENST00000484520 IGFBP6P24592 240 aaPredicted RBP5.62□□□□□ -1.51
SPTA1-206ENST00000484520 CTSKP43235 329 aa5.62□□□□□ -1.51
SPTA1-206ENST00000484520 ZNF200P98182 395 aaPredicted RBP5.62□□□□□ -1.51
SPTA1-206ENST00000484520 RAD51AP2Q09MP3 1159 aa5.62□□□□□ -1.51
SPTA1-206ENST00000484520 PUM1Q14671 1186 aaKnown RBP eCLIP5.62□□□□□ -1.51
SPTA1-206ENST00000484520 PLEKHN1Q494U1 663 aaPredicted RBP5.62□□□□□ -1.51
SPTA1-206ENST00000484520 OVOS1Q6IE37 1185 aa5.62□□□□□ -1.51
SPTA1-206ENST00000484520 ZC3H14Q6PJT7 736 aaKnown RBP5.62□□□□□ -1.51
SPTA1-206ENST00000484520 NLGN1Q8N2Q7 840 aa5.62□□□□□ -1.51
SPTA1-206ENST00000484520 CRELD1Q96HD1 420 aa5.62□□□□□ -1.51
SPTA1-206ENST00000484520 YTHDC1Q96MU7 727 aaKnown RBP5.62□□□□□ -1.51
SPTA1-206ENST00000484520 JMJD8Q96S16 334 aa5.62□□□□□ -1.51
SPTA1-206ENST00000484520 AP5S1Q9NUS5 200 aa5.62□□□□□ -1.51
SPTA1-206ENST00000484520 GFOD1Q9NXC2 390 aa5.62□□□□□ -1.51
SPTA1-206ENST00000484520 TTC21BQ7Z4L5 1316 aa5.62□□□□□ -1.51
SPTA1-206ENST00000484520 IRS2Q9Y4H2 1338 aa5.62□□□□□ -1.51
SPTA1-206ENST00000484520 TMEM94Q12767 1356 aa5.62□□□□□ -1.51
SPTA1-206ENST00000484520 BLMP54132 1417 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms