RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 PANK1Q8TE04 598 aa7.71□□□□□ -1.18
CCDC66-219ENST00000484441 SGSM2O43147 1006 aa7.7□□□□□ -1.18
CCDC66-219ENST00000484441 NCAM1P13591 858 aa7.7□□□□□ -1.18
CCDC66-219ENST00000484441 ATF2P15336 505 aa7.7□□□□□ -1.18
CCDC66-219ENST00000484441 PMLP29590 882 aa7.7□□□□□ -1.18
CCDC66-219ENST00000484441 LSAMPQ13449 338 aa7.7□□□□□ -1.18
CCDC66-219ENST00000484441 NTRK3Q16288 839 aa7.7□□□□□ -1.18
CCDC66-219ENST00000484441 MTERF2Q49AM1 385 aa7.7□□□□□ -1.18
CCDC66-219ENST00000484441 CEP68Q76N32 757 aa7.7□□□□□ -1.18
CCDC66-219ENST00000484441 MIB1Q86YT6 1006 aa7.7□□□□□ -1.18
CCDC66-219ENST00000484441 TMEM151BQ8IW70 566 aa7.7□□□□□ -1.18
CCDC66-219ENST00000484441 SREK1Q8WXA9 508 aaKnown RBP7.7□□□□□ -1.18
CCDC66-219ENST00000484441 SEC14L1Q92503 715 aa7.7□□□□□ -1.18
CCDC66-219ENST00000484441 ALG3Q92685 438 aa7.7□□□□□ -1.18
CCDC66-219ENST00000484441 MKL1Q969V6 931 aa7.7□□□□□ -1.18
CCDC66-219ENST00000484441 IRF2BPLQ9H1B7 796 aa7.7□□□□□ -1.18
CCDC66-219ENST00000484441 SIT1Q9Y3P8 196 aa7.7□□□□□ -1.18
CCDC66-219ENST00000484441 PRODHO43272 600 aa7.69□□□□□ -1.18
CCDC66-219ENST00000484441 HTRA3P83110 453 aa7.69□□□□□ -1.18
CCDC66-219ENST00000484441 SOGA3Q5TF21 947 aa7.69□□□□□ -1.18
CCDC66-219ENST00000484441 YOD1Q5VVQ6 348 aaPredicted RBP7.69□□□□□ -1.18
CCDC66-219ENST00000484441 CNKSR3Q6P9H4 555 aa7.69□□□□□ -1.18
CCDC66-219ENST00000484441 NSMFQ6X4W1 530 aa7.69□□□□□ -1.18
CCDC66-219ENST00000484441 TMEM169Q96HH4 297 aa7.69□□□□□ -1.18
CCDC66-219ENST00000484441 BTG4Q9NY30 223 aa7.69□□□□□ -1.18
CCDC66-219ENST00000484441 SNTG2Q9NY99 539 aa7.69□□□□□ -1.18
CCDC66-219ENST00000484441 PCDHA2Q9Y5H9 948 aa7.69□□□□□ -1.18
CCDC66-219ENST00000484441 LONRF2Q1L5Z9 754 aa7.68□□□□□ -1.18
CCDC66-219ENST00000484441 FBLN7Q53RD9 439 aa7.68□□□□□ -1.18
CCDC66-219ENST00000484441 EMC4Q5J8M3 183 aa7.68□□□□□ -1.18
CCDC66-219ENST00000484441 TCERG1LQ5VWI1 586 aa7.68□□□□□ -1.18
CCDC66-219ENST00000484441 STYK1Q6J9G0 422 aa7.68□□□□□ -1.18
CCDC66-219ENST00000484441 B3GNT8Q7Z7M8 397 aa7.68□□□□□ -1.18
CCDC66-219ENST00000484441 DCAF4Q8WV16 495 aa7.68□□□□□ -1.18
CCDC66-219ENST00000484441 TRMT2BQ96GJ1 504 aaKnown RBP7.68□□□□□ -1.18
CCDC66-219ENST00000484441 DEPDC7Q96QD5 511 aa7.68□□□□□ -1.18
CCDC66-219ENST00000484441 ZFYVE21Q9BQ24 234 aa7.68□□□□□ -1.18
CCDC66-219ENST00000484441 AP5M1Q9H0R1 490 aa7.68□□□□□ -1.18
CCDC66-219ENST00000484441 PPP1R1BQ9UD71 204 aaPredicted RBP7.68□□□□□ -1.18
CCDC66-219ENST00000484441 ZNF652Q9Y2D9 606 aa7.68□□□□□ -1.18
CCDC66-219ENST00000484441 DIAPH1O60610 1272 aaKnown RBP7.67□□□□□ -1.18
CCDC66-219ENST00000484441 MSCO60682 206 aa7.67□□□□□ -1.18
CCDC66-219ENST00000484441 MC3RP41968 323 aa7.67□□□□□ -1.18
CCDC66-219ENST00000484441 LIMS1P48059 325 aa7.67□□□□□ -1.18
CCDC66-219ENST00000484441 AFF3P51826 1226 aaKnown RBP7.67□□□□□ -1.18
CCDC66-219ENST00000484441 SSRP1Q08945 709 aaKnown RBP7.67□□□□□ -1.18
CCDC66-219ENST00000484441 USP53Q70EK8 1073 aa7.67□□□□□ -1.18
CCDC66-219ENST00000484441 ZBTB38Q8NAP3 1195 aaPredicted RBP7.67□□□□□ -1.18
CCDC66-219ENST00000484441 PHF20Q9BVI0 1012 aa7.67□□□□□ -1.18
CCDC66-219ENST00000484441 BCAS3Q9H6U6 928 aa7.67□□□□□ -1.18
CCDC66-219ENST00000484441 FAM221BA6H8Z2 402 aa7.66□□□□□ -1.18
CCDC66-219ENST00000484441 PLA2G1BP04054 148 aaKnown RBP7.66□□□□□ -1.18
CCDC66-219ENST00000484441 FOXO4P98177 505 aa7.66□□□□□ -1.18
CCDC66-219ENST00000484441 CACNB2Q08289 660 aaPredicted RBP7.66□□□□□ -1.18
CCDC66-219ENST00000484441 JMYQ8N9B5 988 aa7.66□□□□□ -1.18
CCDC66-219ENST00000484441 EPB41L1Q9H4G0 881 aa7.66□□□□□ -1.18
CCDC66-219ENST00000484441 PFDN2Q9UHV9 154 aa7.66□□□□□ -1.18
CCDC66-219ENST00000484441 COA3Q9Y2R0 106 aaPredicted RBP7.66□□□□□ -1.18
CCDC66-219ENST00000484441 CCDC85CA6NKD9 419 aa7.65□□□□□ -1.18
CCDC66-219ENST00000484441 TADA3O75528 432 aa7.65□□□□□ -1.18
CCDC66-219ENST00000484441 IFRD2Q12894 506 aaPredicted RBP7.65□□□□□ -1.18
CCDC66-219ENST00000484441 VWA3BQ502W6 1294 aa7.65□□□□□ -1.18
CCDC66-219ENST00000484441 FOXB2Q5VYV0 432 aa7.65□□□□□ -1.18
CCDC66-219ENST00000484441 LBX2Q6XYB7 198 aa7.65□□□□□ -1.18
CCDC66-219ENST00000484441 PWWP2AQ96N64 755 aa7.65□□□□□ -1.18
CCDC66-219ENST00000484441 CLDND1Q9NY35 253 aa7.65□□□□□ -1.18
CCDC66-219ENST00000484441 PALD1Q9ULE6 856 aa7.65□□□□□ -1.18
CCDC66-219ENST00000484441 ADAMTS20P59510 1910 aa7.64□□□□□ -1.19
CCDC66-219ENST00000484441 C6orf222P0C671 652 aaPredicted RBP7.64□□□□□ -1.19
CCDC66-219ENST00000484441 GPR85P60893 370 aa7.64□□□□□ -1.19
CCDC66-219ENST00000484441 CHRNA2Q15822 529 aa7.64□□□□□ -1.19
CCDC66-219ENST00000484441 KCNT2Q6UVM3 1135 aa7.64□□□□□ -1.19
CCDC66-219ENST00000484441 SCUBE1Q8IWY4 988 aa7.64□□□□□ -1.19
CCDC66-219ENST00000484441 NLGN1Q8N2Q7 840 aa7.64□□□□□ -1.19
CCDC66-219ENST00000484441 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.64□□□□□ -1.19
CCDC66-219ENST00000484441 FNIP1Q8TF40 1166 aa7.64□□□□□ -1.19
CCDC66-219ENST00000484441 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.64□□□□□ -1.19
CCDC66-219ENST00000484441 ASXL2Q76L83 1435 aa7.63□□□□□ -1.19
CCDC66-219ENST00000484441 HGSO14964 777 aaPredicted RBP7.63□□□□□ -1.19
CCDC66-219ENST00000484441 C8BP07358 591 aa7.63□□□□□ -1.19
CCDC66-219ENST00000484441 DLX2Q07687 328 aaPredicted RBP7.63□□□□□ -1.19
CCDC66-219ENST00000484441 KIZQ2M2Z5 673 aa7.63□□□□□ -1.19
CCDC66-219ENST00000484441 ZC3H12BQ5HYM0 836 aaKnown RBP7.63□□□□□ -1.19
CCDC66-219ENST00000484441 CYP4F22Q6NT55 531 aa7.63□□□□□ -1.19
CCDC66-219ENST00000484441 ETV3LQ6ZN32 361 aa7.63□□□□□ -1.19
CCDC66-219ENST00000484441 DPH6Q7L8W6 267 aa7.63□□□□□ -1.19
CCDC66-219ENST00000484441 MAMDC2Q7Z304 686 aaPredicted RBP7.63□□□□□ -1.19
CCDC66-219ENST00000484441 FAM126BQ8IXS8 530 aa7.63□□□□□ -1.19
CCDC66-219ENST00000484441 LINC01356Q8N9X3 169 aa7.63□□□□□ -1.19
CCDC66-219ENST00000484441 SMARCC2Q8TAQ2 1214 aa7.63□□□□□ -1.19
CCDC66-219ENST00000484441 EXOC2Q96KP1 924 aa7.63□□□□□ -1.19
CCDC66-219ENST00000484441 PPARGC1AQ9UBK2 798 aaKnown RBP7.63□□□□□ -1.19
CCDC66-219ENST00000484441 RAPGEFL1Q9UHV5 662 aa7.63□□□□□ -1.19
CCDC66-219ENST00000484441 FAN1Q9Y2M0 1017 aa7.63□□□□□ -1.19
CCDC66-219ENST00000484441 KDM2BQ8NHM5 1336 aa7.62□□□□□ -1.19
CCDC66-219ENST00000484441 TRBV23-1A0A0A0MS06 115 aa7.62□□□□□ -1.19
CCDC66-219ENST00000484441 KRTAP4-8A0A0G2JLE6 195 aa7.62□□□□□ -1.19
CCDC66-219ENST00000484441 BLACEA4D250 179 aa7.62□□□□□ -1.19
CCDC66-219ENST00000484441 FFAR3O14843 346 aa7.62□□□□□ -1.19
CCDC66-219ENST00000484441 TRIM13O60858 407 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms