RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 ITGA7Q13683 1181 aa14.17□□□□□ -0.14
MSH5-216ENST00000484309 CCDC62Q6P9F0 684 aa14.17□□□□□ -0.14
MSH5-216ENST00000484309 ANKRD33Q7Z3H0 272 aa14.17□□□□□ -0.14
MSH5-216ENST00000484309 HEATR3Q7Z4Q2 680 aa14.17□□□□□ -0.14
MSH5-216ENST00000484309 SMARCC2Q8TAQ2 1214 aa14.17□□□□□ -0.14
MSH5-216ENST00000484309 BRF1Q92994 677 aa14.17□□□□□ -0.14
MSH5-216ENST00000484309 RBM28Q9NW13 759 aaKnown RBP14.17□□□□□ -0.14
MSH5-216ENST00000484309 MAP3K20Q9NYL2 800 aaKnown RBP14.17□□□□□ -0.14
MSH5-216ENST00000484309 MRVI1Q9Y6F6 885 aa14.17□□□□□ -0.14
MSH5-216ENST00000484309 GRIN2DO15399 1336 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 A0A1W2PPC1 479 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 EIF3JO75822 258 aaKnown RBP14.16□□□□□ -0.14
MSH5-216ENST00000484309 CABYRO75952 493 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 RGS20O76081 388 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 GH1P01241 217 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 RAG1P15918 1043 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 RPS6KB1P23443 525 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 CDC27P30260 824 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 CCND2P30279 289 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 PURAQ00577 322 aaKnown RBP14.16□□□□□ -0.14
MSH5-216ENST00000484309 ARHGAP1Q07960 439 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 UBE2SQ16763 222 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 FAM126BQ8IXS8 530 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 TDHQ8IZJ6 230 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 SAMD3Q8N6K7 520 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 AFG1LQ8WV93 481 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 CUL5Q93034 780 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 LRCH3Q96II8 777 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 TOX2Q96NM4 488 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 USP26Q9BXU7 913 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 PPP1R12CQ9BZL4 782 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 POLR3EQ9NVU0 708 aa14.16□□□□□ -0.14
MSH5-216ENST00000484309 MROH7Q68CQ1 1323 aa14.15□□□□□ -0.14
MSH5-216ENST00000484309 MEIS2O14770 477 aa14.15□□□□□ -0.14
MSH5-216ENST00000484309 KIAA0355O15063 1070 aa14.15□□□□□ -0.14
MSH5-216ENST00000484309 TLR3O15455 904 aaKnown RBP14.15□□□□□ -0.14
MSH5-216ENST00000484309 METAP2P50579 478 aaKnown RBP eCLIP14.15□□□□□ -0.14
MSH5-216ENST00000484309 BRDTQ58F21 947 aaPredicted RBP14.15□□□□□ -0.14
MSH5-216ENST00000484309 WWC2Q6AWC2 1192 aa14.15□□□□□ -0.14
MSH5-216ENST00000484309 VSIG10LQ86VR7 867 aa14.15□□□□□ -0.14
MSH5-216ENST00000484309 FAM217BQ9NTX9 383 aaPredicted RBP14.15□□□□□ -0.14
MSH5-216ENST00000484309 DDX41Q9UJV9 622 aaKnown RBP14.15□□□□□ -0.14
MSH5-216ENST00000484309 TBX21Q9UL17 535 aa14.15□□□□□ -0.14
MSH5-216ENST00000484309 TANC1Q9C0D5 1861 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 A6NJR5 290 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 PPFIA3O75145 1194 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 MMP3P08254 477 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 PSMA5P28066 241 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 ADD1P35611 737 aaKnown RBP14.14□□□□□ -0.15
MSH5-216ENST00000484309 FUT2Q10981 343 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 FAM47CQ5HY64 1035 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 C9orf50Q5SZB4 431 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 TYW1BQ6NUM6 668 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 SLC43A3Q8NBI5 491 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 MTG1Q9BT17 334 aaPredicted RBP14.14□□□□□ -0.15
MSH5-216ENST00000484309 TRPV6Q9H1D0 765 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 PSTPIP2Q9H939 334 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 RTEL1Q9NZ71 1219 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 V9GY48 417 aaPredicted RBP14.14□□□□□ -0.15
MSH5-216ENST00000484309 GBF1Q92538 1859 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 FRMPD4Q14CM0 1322 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 KAT6AQ92794 2004 aa14.14□□□□□ -0.15
MSH5-216ENST00000484309 B4GALT4O60513 344 aa14.13□□□□□ -0.15
MSH5-216ENST00000484309 CD4P01730 458 aa14.13□□□□□ -0.15
MSH5-216ENST00000484309 EPHB4P54760 987 aa14.13□□□□□ -0.15
MSH5-216ENST00000484309 NAPAP54920 295 aa14.13□□□□□ -0.15
MSH5-216ENST00000484309 MRPS9P82933 396 aaKnown RBP14.13□□□□□ -0.15
MSH5-216ENST00000484309 NBPF20Q3BBV1 942 aa14.13□□□□□ -0.15
MSH5-216ENST00000484309 LARP6Q9BRS8 491 aaKnown RBP14.13□□□□□ -0.15
MSH5-216ENST00000484309 UPF3BQ9BZI7 483 aaKnown RBP14.13□□□□□ -0.15
MSH5-216ENST00000484309 TRMT13Q9NUP7 481 aaKnown RBP14.13□□□□□ -0.15
MSH5-216ENST00000484309 UMODL1Q5DID0 1318 aa14.13□□□□□ -0.15
MSH5-216ENST00000484309 PIK3CDO00329 1044 aa14.12□□□□□ -0.15
MSH5-216ENST00000484309 GGPS1O95749 300 aa14.12□□□□□ -0.15
MSH5-216ENST00000484309 TIMP1P01033 207 aa14.12□□□□□ -0.15
MSH5-216ENST00000484309 ZNF286BP0CG31 522 aa14.12□□□□□ -0.15
MSH5-216ENST00000484309 UBA1P22314 1058 aaKnown RBP14.12□□□□□ -0.15
MSH5-216ENST00000484309 CYP2C18P33260 490 aa14.12□□□□□ -0.15
MSH5-216ENST00000484309 CCT2P78371 535 aaKnown RBP14.12□□□□□ -0.15
MSH5-216ENST00000484309 SP2Q02086 613 aa14.12□□□□□ -0.15
MSH5-216ENST00000484309 FPGSQ05932 587 aa14.12□□□□□ -0.15
MSH5-216ENST00000484309 SHHQ15465 462 aa14.12□□□□□ -0.15
MSH5-216ENST00000484309 RUFY3Q7L099 469 aa14.12□□□□□ -0.15
MSH5-216ENST00000484309 DHX37Q8IY37 1157 aaKnown RBP14.12□□□□□ -0.15
MSH5-216ENST00000484309 PGBD1Q96JS3 809 aa14.12□□□□□ -0.15
MSH5-216ENST00000484309 ALDH8A1Q9H2A2 487 aaPredicted RBP14.12□□□□□ -0.15
MSH5-216ENST00000484309 BCAS3Q9H6U6 928 aa14.12□□□□□ -0.15
MSH5-216ENST00000484309 STXBP3O00186 592 aa14.11□□□□□ -0.15
MSH5-216ENST00000484309 EPB41L2O43491 1005 aaKnown RBP14.11□□□□□ -0.15
MSH5-216ENST00000484309 RCAN1P53805 252 aa14.11□□□□□ -0.15
MSH5-216ENST00000484309 SEMA3FQ13275 785 aa14.11□□□□□ -0.15
MSH5-216ENST00000484309 TOB2Q14106 344 aaPredicted RBP14.11□□□□□ -0.15
MSH5-216ENST00000484309 PHKBQ93100 1093 aa14.11□□□□□ -0.15
MSH5-216ENST00000484309 ALG1Q9BT22 464 aa14.11□□□□□ -0.15
MSH5-216ENST00000484309 AGXT2Q9BYV1 514 aa14.11□□□□□ -0.15
MSH5-216ENST00000484309 NCOA5Q9HCD5 579 aaKnown RBP14.11□□□□□ -0.15
MSH5-216ENST00000484309 ZSWIM6Q9HCJ5 1215 aa14.11□□□□□ -0.15
MSH5-216ENST00000484309 CYP46A1Q9Y6A2 500 aa14.11□□□□□ -0.15
MSH5-216ENST00000484309 NID2Q14112 1375 aa14.1□□□□□ -0.15
MSH5-216ENST00000484309 SPDYE3A6NKU9 549 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms