RNA–Protein interactions for RNA: ENST00000484087.5

BRCA1-216, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 1,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-216ENST00000484087 A1CFQ9NQ94 594 aaKnown RBP7.96□□□□□ -1.13
BRCA1-216ENST00000484087 PLA2G2EQ9NZK7 142 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 CCPG1Q9ULG6 757 aa7.96□□□□□ -1.13
BRCA1-216ENST00000484087 PFASO15067 1338 aa7.96□□□□□ -1.14
BRCA1-216ENST00000484087 ELP1O95163 1332 aa7.96□□□□□ -1.14
BRCA1-216ENST00000484087 SOWAHBA6NEL2 793 aa7.95□□□□□ -1.14
BRCA1-216ENST00000484087 LSM11P83369 360 aaKnown RBP eCLIP7.95□□□□□ -1.14
BRCA1-216ENST00000484087 AKAP17AQ02040 695 aaKnown RBP7.95□□□□□ -1.14
BRCA1-216ENST00000484087 GNL2Q13823 731 aaKnown RBP7.95□□□□□ -1.14
BRCA1-216ENST00000484087 CDC37Q16543 378 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-216ENST00000484087 GJC2Q5T442 439 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-216ENST00000484087 MFSD14CQ5VZR4 134 aa7.95□□□□□ -1.14
BRCA1-216ENST00000484087 EEPD1Q7L9B9 569 aa7.95□□□□□ -1.14
BRCA1-216ENST00000484087 CCDC144CPQ8IYA2 1237 aa7.95□□□□□ -1.14
BRCA1-216ENST00000484087 CMTR1Q8N1G2 835 aaKnown RBP7.95□□□□□ -1.14
BRCA1-216ENST00000484087 GPT2Q8TD30 523 aa7.95□□□□□ -1.14
BRCA1-216ENST00000484087 CHURC1Q8WUH1 139 aa7.95□□□□□ -1.14
BRCA1-216ENST00000484087 DDX27Q96GQ7 796 aaKnown RBP7.95□□□□□ -1.14
BRCA1-216ENST00000484087 SPATA32Q96LK8 384 aa7.95□□□□□ -1.14
BRCA1-216ENST00000484087 TRERF1Q96PN7 1200 aa7.95□□□□□ -1.14
BRCA1-216ENST00000484087 ACAD9Q9H845 621 aa7.95□□□□□ -1.14
BRCA1-216ENST00000484087 RBM28Q9NW13 759 aaKnown RBP7.95□□□□□ -1.14
BRCA1-216ENST00000484087 ZHX1Q9UKY1 873 aaPredicted RBP7.95□□□□□ -1.14
BRCA1-216ENST00000484087 SYNPO2Q9UMS6 1093 aa7.95□□□□□ -1.14
BRCA1-216ENST00000484087 STK36Q9NRP7 1315 aa7.95□□□□□ -1.14
BRCA1-216ENST00000484087 DNAJC25-GNG10A0A024R161 153 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-216ENST00000484087 MYADML2A6NDP7 307 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 ATP2A1O14983 1001 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 STRNO43815 780 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 PPP1R11O60927 126 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-216ENST00000484087 DTNBO60941 627 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 SNAI1O95863 264 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-216ENST00000484087 PGK1P00558 417 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 ICAM1P05362 532 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 XBP1P17861 261 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 ADD1P35611 737 aaKnown RBP7.94□□□□□ -1.14
BRCA1-216ENST00000484087 FOSBP53539 338 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 ZNF445P59923 1031 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 RESTQ13127 1097 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 MFSD10Q14728 455 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 SAFBQ15424 915 aaKnown RBP eCLIP7.94□□□□□ -1.14
BRCA1-216ENST00000484087 ZSCAN23Q3MJ62 389 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 OLFML2BQ68BL8 750 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 BTNL9Q6UXG8 535 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 BRAPQ7Z569 592 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 DGKHQ86XP1 1220 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 HOMER1Q86YM7 354 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 ADGRF4Q8IZF3 695 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 ZNF654Q8IZM8 581 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 NUP133Q8WUM0 1156 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 TBC1D5Q92609 795 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 ANP32BQ92688 251 aaKnown RBP7.94□□□□□ -1.14
BRCA1-216ENST00000484087 DPF3Q92784 378 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 CHAMP1Q96JM3 812 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 TINF2Q9BSI4 451 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 DDX20Q9UHI6 824 aaKnown RBP7.94□□□□□ -1.14
BRCA1-216ENST00000484087 MAD2L2Q9UI95 211 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 OGDHLQ9ULD0 1010 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 ARIH1Q9Y4X5 557 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-216ENST00000484087 NID2Q14112 1375 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 DOCK5Q9H7D0 1870 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 MYH15Q9Y2K3 1946 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 FSD2A1L4K1 749 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 H0YGN5 161 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 ZNF865P0CJ78 1059 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-216ENST00000484087 IFNAR1P17181 557 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 SYN1P17600 705 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 CALML3P27482 149 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 BAATQ14032 418 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-216ENST00000484087 QRICH1Q2TAL8 776 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 CCDC183Q5T5S1 534 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 ARMCX2Q7L311 632 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 FBXO16Q8IX29 292 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-216ENST00000484087 C7orf61Q8IZ16 206 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 ABRAQ8N0Z2 381 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 FANCBQ8NB91 859 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 FBXO18Q8NFZ0 1043 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 CTCFLQ8NI51 663 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-216ENST00000484087 CLEC4DQ8WXI8 215 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 FERMT2Q96AC1 680 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 ALG1Q9BT22 464 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 SLC26A6Q9BXS9 759 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 JMJD4Q9H9V9 463 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 CYP39A1Q9NYL5 469 aa7.94□□□□□ -1.14
BRCA1-216ENST00000484087 ZMYND8Q9ULU4 1186 aaPredicted RBP7.94□□□□□ -1.14
BRCA1-216ENST00000484087 LTBP2Q14767 1821 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 hCG_1642624A0A1W2PR95 340 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 CYTH3O43739 400 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 PLA2G6O60733 806 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 GADD45BO75293 160 aaPredicted RBP7.93□□□□□ -1.14
BRCA1-216ENST00000484087 DDAH1O94760 285 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 PLEKHA8P1O95397 391 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 DEXIO95424 95 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 PARP1P09874 1014 aaKnown RBP7.93□□□□□ -1.14
BRCA1-216ENST00000484087 FDPSP14324 419 aaKnown RBP7.93□□□□□ -1.14
BRCA1-216ENST00000484087 KIF5BP33176 963 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 PBX2P40425 430 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 OAZ1P54368 228 aa7.93□□□□□ -1.14
BRCA1-216ENST00000484087 GUCY1B3Q02153 619 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms