RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 PDE4DQ08499 809 aa14.83□□□□□ -0.04
CPNE1-225ENST00000483495 TPD52L1Q16890 204 aaPredicted RBP14.83□□□□□ -0.04
CPNE1-225ENST00000483495 PRR16Q569H4 304 aa14.83□□□□□ -0.04
CPNE1-225ENST00000483495 DCAF15Q66K64 600 aa14.83□□□□□ -0.04
CPNE1-225ENST00000483495 UNC13DQ70J99 1090 aa14.83□□□□□ -0.04
CPNE1-225ENST00000483495 KCNK18Q7Z418 384 aa14.83□□□□□ -0.04
CPNE1-225ENST00000483495 APOBEC3FQ8IUX4 373 aaKnown RBP14.83□□□□□ -0.04
CPNE1-225ENST00000483495 TMX1Q9H3N1 280 aa14.83□□□□□ -0.04
CPNE1-225ENST00000483495 ICAM1P05362 532 aa14.82□□□□□ -0.04
CPNE1-225ENST00000483495 NBPF12Q5TAG4 269 aaPredicted RBP14.82□□□□□ -0.04
CPNE1-225ENST00000483495 LDHDQ86WU2 507 aa14.82□□□□□ -0.04
CPNE1-225ENST00000483495 PRPF38AQ8NAV1 312 aaKnown RBP14.82□□□□□ -0.04
CPNE1-225ENST00000483495 CCDC112Q8NEF3 446 aa14.82□□□□□ -0.04
CPNE1-225ENST00000483495 HOOK2Q96ED9 719 aa14.82□□□□□ -0.04
CPNE1-225ENST00000483495 MAPK8IP1Q9UQF2 711 aa14.82□□□□□ -0.04
CPNE1-225ENST00000483495 STK24Q9Y6E0 443 aa14.82□□□□□ -0.04
CPNE1-225ENST00000483495 IGLV3-22A0A075B6J6 115 aa14.82□□□□□ -0.04
CPNE1-225ENST00000483495 CCT6AP40227 531 aaKnown RBP14.82□□□□□ -0.04
CPNE1-225ENST00000483495 EHHADHQ08426 723 aa14.82□□□□□ -0.04
CPNE1-225ENST00000483495 STK4Q13043 487 aa14.82□□□□□ -0.04
CPNE1-225ENST00000483495 TTI2Q6NXR4 508 aa14.82□□□□□ -0.04
CPNE1-225ENST00000483495 TBC1D5Q92609 795 aa14.82□□□□□ -0.04
CPNE1-225ENST00000483495 SLF1Q9BQI6 1058 aa14.82□□□□□ -0.04
CPNE1-225ENST00000483495 THAP9Q9H5L6 903 aa14.82□□□□□ -0.04
CPNE1-225ENST00000483495 GPRC5DQ9NZD1 345 aa14.82□□□□□ -0.04
CPNE1-225ENST00000483495 ZNF536O15090 1300 aa14.81□□□□□ -0.04
CPNE1-225ENST00000483495 MSH4O15457 936 aa14.81□□□□□ -0.04
CPNE1-225ENST00000483495 NRDCO43847 1150 aa14.81□□□□□ -0.04
CPNE1-225ENST00000483495 CFBP00751 764 aa14.81□□□□□ -0.04
CPNE1-225ENST00000483495 LMNB1P20700 586 aa14.81□□□□□ -0.04
CPNE1-225ENST00000483495 CCNE1P24864 410 aa14.81□□□□□ -0.04
CPNE1-225ENST00000483495 PMS1P54277 932 aaKnown RBP14.81□□□□□ -0.04
CPNE1-225ENST00000483495 GHRHRQ02643 423 aa14.81□□□□□ -0.04
CPNE1-225ENST00000483495 KRT31Q15323 416 aa14.81□□□□□ -0.04
CPNE1-225ENST00000483495 FILIP1LQ4L180 1135 aa14.81□□□□□ -0.04
CPNE1-225ENST00000483495 TCP11X2Q5H9J9 407 aa14.81□□□□□ -0.04
CPNE1-225ENST00000483495 HAUS3Q68CZ6 603 aa14.81□□□□□ -0.04
CPNE1-225ENST00000483495 IRF2BP1Q8IU81 584 aa14.81□□□□□ -0.04
CPNE1-225ENST00000483495 GPC2Q8N158 579 aa14.81□□□□□ -0.04
CPNE1-225ENST00000483495 NOC3LQ8WTT2 800 aaKnown RBP14.81□□□□□ -0.04
CPNE1-225ENST00000483495 WDR18Q9BV38 432 aa14.81□□□□□ -0.04
CPNE1-225ENST00000483495 KCNJ18B7U540 433 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 TEX33O43247 280 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 COBLO75128 1261 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 FCER1AP12319 257 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 HSD17B4P51659 736 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 KCNJ12Q14500 433 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 ANGEL2Q5VTE6 544 aaKnown RBP14.8□□□□□ -0.04
CPNE1-225ENST00000483495 FCHSD1Q86WN1 690 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 SCYL3Q8IZE3 742 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 KIAA0895Q8NCT3 520 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 DDX12PQ92771 950 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 EHMT1Q9H9B1 1298 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 VAV3Q9UKW4 847 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 PPP2R3BQ9Y5P8 575 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 BICDL2A1A5D9 508 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 TRIM49BA6NDI0 452 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 STAT3P40763 770 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 USP14P54578 494 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 PSMD2Q13200 908 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 DNTTIP2Q5QJE6 756 aaKnown RBP14.8□□□□□ -0.04
CPNE1-225ENST00000483495 ANKRD20A12PQ8NF67 263 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 ERMNQ8TAM6 284 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 TRPM4Q8TD43 1214 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 P2RX5Q93086 422 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 DNAJC19Q96DA6 116 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 DUSP9Q99956 384 aaKnown RBP14.8□□□□□ -0.04
CPNE1-225ENST00000483495 SLC38A10Q9HBR0 1119 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 EMILIN3Q9NT22 766 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 KIAA1024Q9UPX6 916 aa14.8□□□□□ -0.04
CPNE1-225ENST00000483495 R3HCC1Q9Y3T6 440 aaKnown RBP14.8□□□□□ -0.04
CPNE1-225ENST00000483495 ITIH6Q6UXX5 1313 aa14.79□□□□□ -0.04
CPNE1-225ENST00000483495 MED24O75448 989 aa14.79□□□□□ -0.04
CPNE1-225ENST00000483495 EEF1GP26641 437 aaKnown RBP14.79□□□□□ -0.04
CPNE1-225ENST00000483495 RPA1P27694 616 aa14.79□□□□□ -0.04
CPNE1-225ENST00000483495 ZNF76P36508 570 aa14.79□□□□□ -0.04
CPNE1-225ENST00000483495 COPB1P53618 953 aaKnown RBP14.79□□□□□ -0.04
CPNE1-225ENST00000483495 PTPN21Q16825 1174 aa14.79□□□□□ -0.04
CPNE1-225ENST00000483495 CCAR2Q8N163 923 aaKnown RBP14.79□□□□□ -0.04
CPNE1-225ENST00000483495 KCTD17Q8N5Z5 321 aa14.79□□□□□ -0.04
CPNE1-225ENST00000483495 CYP2W1Q8TAV3 490 aa14.79□□□□□ -0.04
CPNE1-225ENST00000483495 CCPG1Q9ULG6 757 aa14.79□□□□□ -0.04
CPNE1-225ENST00000483495 RABGAP1Q9Y3P9 1069 aa14.79□□□□□ -0.04
CPNE1-225ENST00000483495 SMCHD1A6NHR9 2005 aa14.79□□□□□ -0.04
CPNE1-225ENST00000483495 POTEB3A0JP26 581 aa14.78□□□□□ -0.04
CPNE1-225ENST00000483495 POTECB2RU33 542 aa14.78□□□□□ -0.04
CPNE1-225ENST00000483495 PLA2G4BP0C869 781 aa14.78□□□□□ -0.04
CPNE1-225ENST00000483495 VCAM1P19320 739 aa14.78□□□□□ -0.04
CPNE1-225ENST00000483495 MTMR2Q13614 643 aa14.78□□□□□ -0.04
CPNE1-225ENST00000483495 CENPPQ6IPU0 288 aa14.78□□□□□ -0.04
CPNE1-225ENST00000483495 FOXR2Q6PJQ5 311 aa14.78□□□□□ -0.04
CPNE1-225ENST00000483495 POTEBQ6S5H4 581 aa14.78□□□□□ -0.04
CPNE1-225ENST00000483495 DYMQ7RTS9 669 aa14.78□□□□□ -0.04
CPNE1-225ENST00000483495 TMEM139Q8IV31 216 aa14.78□□□□□ -0.04
CPNE1-225ENST00000483495 GUF1Q8N442 669 aaKnown RBP14.78□□□□□ -0.04
CPNE1-225ENST00000483495 SAMD3Q8N6K7 520 aa14.78□□□□□ -0.04
CPNE1-225ENST00000483495 TC2NQ8N9U0 490 aa14.78□□□□□ -0.04
CPNE1-225ENST00000483495 CLEC4DQ8WXI8 215 aa14.78□□□□□ -0.04
CPNE1-225ENST00000483495 TRIM47Q96LD4 638 aa14.78□□□□□ -0.04
CPNE1-225ENST00000483495 AGBL1Q96MI9 1066 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms