RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 PPARDQ03181 441 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 ODF2Q5BJF6 829 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 GKAP1Q5VSY0 366 aaPredicted RBP12.19□□□□□ -0.46
RPGR-208ENST00000482855 PIK3AP1Q6ZUJ8 805 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 KIRREL3Q8IZU9 778 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 DISC1Q9NRI5 854 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 SLC12A6Q9UHW9 1150 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 KCNG1Q9UIX4 513 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 RIPOR2Q9Y4F9 1068 aa12.19□□□□□ -0.46
RPGR-208ENST00000482855 BUB1O43683 1085 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 DNAJC8O75937 253 aaPredicted RBP12.18□□□□□ -0.46
RPGR-208ENST00000482855 RHOBTB3O94955 611 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 TRAPPC10P48553 1259 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 HLTFQ14527 1009 aaKnown RBP eCLIP12.18□□□□□ -0.46
RPGR-208ENST00000482855 RUFY4Q6ZNE9 571 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 MAGEB6Q8N7X4 407 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 HVCN1Q96D96 273 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 SALL4Q9UJQ4 1053 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 TNKSO95271 1327 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 ITGB4P16144 1822 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 C5orf60A6NFR6 353 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 TMOD1P28289 359 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 DNA2P51530 1060 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 BIRC3Q13489 604 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 MIIPQ5JXC2 388 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 RCSD1Q6JBY9 416 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 LDHAL6AQ6ZMR3 332 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 ZSCAN29Q8IWY8 852 aaPredicted RBP12.18□□□□□ -0.46
RPGR-208ENST00000482855 RNF10Q8N5U6 811 aaKnown RBP12.18□□□□□ -0.46
RPGR-208ENST00000482855 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.18□□□□□ -0.46
RPGR-208ENST00000482855 P2RX5Q93086 422 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 HOOK2Q96ED9 719 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 MTMR8Q96EF0 704 aa12.18□□□□□ -0.46
RPGR-208ENST00000482855 GRID2IPA4D2P6 1211 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 PRKAB2O43741 272 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 KLRC4O43908 158 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 BUB1BO60566 1050 aaPredicted RBP12.17□□□□□ -0.46
RPGR-208ENST00000482855 PLEKHA8P1O95397 391 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 ATP6V1G2O95670 118 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 MYL1P05976 194 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 GHRP10912 638 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 CCNE1P24864 410 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 RASSF7Q02833 373 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 NPY5RQ15761 445 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 ARL6IP4Q66PJ3 421 aaKnown RBP12.17□□□□□ -0.46
RPGR-208ENST00000482855 CPLX4Q7Z7G2 160 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 EGFL6Q8IUX8 553 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 TBC1D31Q96DN5 1066 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 TAF1DQ9H5J8 278 aaPredicted RBP12.17□□□□□ -0.46
RPGR-208ENST00000482855 NOD2Q9HC29 1040 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 RBM28Q9NW13 759 aaKnown RBP12.17□□□□□ -0.46
RPGR-208ENST00000482855 BCCIPQ9P287 314 aaKnown RBP eCLIP12.17□□□□□ -0.46
RPGR-208ENST00000482855 BAIAP2L1Q9UHR4 511 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 SLC4A4Q9Y6R1 1079 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 TOGARAM1Q9Y4F4 1720 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 UQCRFS1P1P0C7P4 283 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 CTNNA1P35221 906 aaKnown RBP12.17□□□□□ -0.46
RPGR-208ENST00000482855 HSD17B3P37058 310 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 PHKA1P46020 1223 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 PPP2R2AP63151 447 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 TNNC1P63316 161 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 FUT2Q10981 343 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 MAP3K12Q12852 859 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 TRADDQ15628 312 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 CHRNA2Q15822 529 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 C11orf91Q3C1V1 193 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 MAB21L3Q8N8X9 362 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 KDM4CQ9H3R0 1056 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 CNNM1Q9NRU3 951 aa12.17□□□□□ -0.46
RPGR-208ENST00000482855 FAM207AQ9NSI2 230 aaPredicted RBP12.17□□□□□ -0.46
RPGR-208ENST00000482855 PCCAP05165 728 aaPredicted RBP12.16□□□□□ -0.46
RPGR-208ENST00000482855 ELF3P78545 371 aaPredicted RBP12.16□□□□□ -0.46
RPGR-208ENST00000482855 SARNPP82979 210 aaKnown RBP12.16□□□□□ -0.46
RPGR-208ENST00000482855 SEMA3FQ13275 785 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 BYSLQ13895 437 aaKnown RBP12.16□□□□□ -0.46
RPGR-208ENST00000482855 OR2W6PQ8NHA6 318 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 CCT6BQ92526 530 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 RAPGEF5Q92565 580 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 TATDN2Q93075 761 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 CCDC47Q96A33 483 aaKnown RBP12.16□□□□□ -0.46
RPGR-208ENST00000482855 LRRC45Q96CN5 670 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 BATF3Q9NR55 127 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 BACH1O14867 736 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 RAD51CO43502 376 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 ZPR1O75312 459 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 GNAT2P19087 354 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 ARID4AP29374 1257 aaPredicted RBP12.16□□□□□ -0.46
RPGR-208ENST00000482855 PPP1R7Q15435 360 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 SEC23AQ15436 765 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 NAALADL2Q58DX5 795 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 ANKRD40Q6AI12 368 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 HIBCHQ6NVY1 386 aaPredicted RBP12.16□□□□□ -0.46
RPGR-208ENST00000482855 CATIPQ7Z7H3 387 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 GPIHBP1Q8IV16 184 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 TTLL11Q8NHH1 800 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 CUL5Q93034 780 aa12.16□□□□□ -0.46
RPGR-208ENST00000482855 BAZ2BQ9UIF8 2168 aaKnown RBP12.16□□□□□ -0.46
RPGR-208ENST00000482855 LRRC53A6NM62 1247 aa12.15□□□□□ -0.46
RPGR-208ENST00000482855 PAEPP09466 180 aa12.15□□□□□ -0.46
RPGR-208ENST00000482855 GCKP35557 465 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms