RNA–Protein interactions for RNA: ENST00000482655.2

GTF3A-207, Transcript of general transcription factor IIIA, humanhuman

TSL 2

Gene GTF3A, Length 829 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-207ENST00000482655 FNIP1Q8TF40 1166 aa5.75□□□□□ -1.49
GTF3A-207ENST00000482655 KCTD13Q8WZ19 329 aa5.75□□□□□ -1.49
GTF3A-207ENST00000482655 SEC14L1Q92503 715 aa5.75□□□□□ -1.49
GTF3A-207ENST00000482655 DDX11Q96FC9 970 aa5.75□□□□□ -1.49
GTF3A-207ENST00000482655 LUC7LQ9NQ29 371 aaKnown RBP5.75□□□□□ -1.49
GTF3A-207ENST00000482655 TMEFF2Q9UIK5 374 aaPredicted RBP5.75□□□□□ -1.49
GTF3A-207ENST00000482655 A0A1W2PQU0 124 aa5.74□□□□□ -1.49
GTF3A-207ENST00000482655 FFAR3O14843 346 aa5.74□□□□□ -1.49
GTF3A-207ENST00000482655 CYP2C8P10632 490 aa5.74□□□□□ -1.49
GTF3A-207ENST00000482655 CACNB2Q08289 660 aaPredicted RBP5.74□□□□□ -1.49
GTF3A-207ENST00000482655 MAP4K2Q12851 820 aa5.74□□□□□ -1.49
GTF3A-207ENST00000482655 HSP90AA2PQ14568 343 aaPredicted RBP5.74□□□□□ -1.49
GTF3A-207ENST00000482655 CHRNA2Q15822 529 aa5.74□□□□□ -1.49
GTF3A-207ENST00000482655 NAALADL2Q58DX5 795 aa5.74□□□□□ -1.49
GTF3A-207ENST00000482655 ZC3H18Q86VM9 953 aaKnown RBP5.74□□□□□ -1.49
GTF3A-207ENST00000482655 RCBTB1Q8NDN9 531 aa5.74□□□□□ -1.49
GTF3A-207ENST00000482655 YIPF4Q9BSR8 244 aa5.74□□□□□ -1.49
GTF3A-207ENST00000482655 IER2Q9BTL4 223 aa5.74□□□□□ -1.49
GTF3A-207ENST00000482655 PCDHA2Q9Y5H9 948 aa5.74□□□□□ -1.49
GTF3A-207ENST00000482655 CECR2Q9BXF3 1484 aa5.74□□□□□ -1.49
GTF3A-207ENST00000482655 H7BY64 318 aa5.73□□□□□ -1.49
GTF3A-207ENST00000482655 KLF4O43474 513 aa5.73□□□□□ -1.49
GTF3A-207ENST00000482655 PLA2G1BP04054 148 aaKnown RBP5.73□□□□□ -1.49
GTF3A-207ENST00000482655 KCNC1P48547 511 aa5.73□□□□□ -1.49
GTF3A-207ENST00000482655 LSAMPQ13449 338 aa5.73□□□□□ -1.49
GTF3A-207ENST00000482655 RAB33AQ14088 237 aa5.73□□□□□ -1.49
GTF3A-207ENST00000482655 TESK1Q15569 626 aa5.73□□□□□ -1.49
GTF3A-207ENST00000482655 MILR1Q7Z6M3 343 aa5.73□□□□□ -1.49
GTF3A-207ENST00000482655 Q8N1Y9 231 aa5.73□□□□□ -1.49
GTF3A-207ENST00000482655 KREMEN2Q8NCW0 462 aa5.73□□□□□ -1.49
GTF3A-207ENST00000482655 ST13P5Q8NFI4 369 aaPredicted RBP5.73□□□□□ -1.49
GTF3A-207ENST00000482655 FEZF2Q8TBJ5 459 aa5.73□□□□□ -1.49
GTF3A-207ENST00000482655 SGSM3Q96HU1 749 aa5.73□□□□□ -1.49
GTF3A-207ENST00000482655 PCDH18Q9HCL0 1135 aa5.73□□□□□ -1.49
GTF3A-207ENST00000482655 CLDND1Q9NY35 253 aa5.73□□□□□ -1.49
GTF3A-207ENST00000482655 PALD1Q9ULE6 856 aa5.73□□□□□ -1.49
GTF3A-207ENST00000482655 X6R8D5 127 aa5.73□□□□□ -1.49
GTF3A-207ENST00000482655 SGSM2O43147 1006 aa5.72□□□□□ -1.49
GTF3A-207ENST00000482655 DGKIO75912 1065 aa5.72□□□□□ -1.49
GTF3A-207ENST00000482655 GRIA2P42262 883 aa5.72□□□□□ -1.49
GTF3A-207ENST00000482655 HTRA3P83110 453 aa5.72□□□□□ -1.49
GTF3A-207ENST00000482655 NFIXQ14938 502 aa5.72□□□□□ -1.49
GTF3A-207ENST00000482655 VWA3BQ502W6 1294 aa5.72□□□□□ -1.49
GTF3A-207ENST00000482655 ERICH6BQ5W0A0 696 aa5.72□□□□□ -1.49
GTF3A-207ENST00000482655 SAPCD2Q86UD0 394 aa5.72□□□□□ -1.49
GTF3A-207ENST00000482655 NLRP10Q86W26 655 aa5.72□□□□□ -1.49
GTF3A-207ENST00000482655 ZDHHC14Q8IZN3 488 aa5.72□□□□□ -1.49
GTF3A-207ENST00000482655 LRRC47Q8N1G4 583 aaKnown RBP5.72□□□□□ -1.49
GTF3A-207ENST00000482655 AARSD1Q9BTE6 412 aaKnown RBP5.72□□□□□ -1.49
GTF3A-207ENST00000482655 TANGO6Q9C0B7 1094 aa5.72□□□□□ -1.49
GTF3A-207ENST00000482655 XYLT2Q9H1B5 865 aa5.72□□□□□ -1.49
GTF3A-207ENST00000482655 A0A0G2JLL6 359 aaPredicted RBP5.71□□□□□ -1.5
GTF3A-207ENST00000482655 OTOL1A6NHN0 477 aaPredicted RBP5.71□□□□□ -1.5
GTF3A-207ENST00000482655 SMARCA5O60264 1052 aaPredicted RBP5.71□□□□□ -1.5
GTF3A-207ENST00000482655 LCP1P13796 627 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 ATP2B1P20020 1258 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 SLURP1P55000 103 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 SLC35F1Q5T1Q4 408 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 CD300LDQ6UXZ3 194 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 LIPIQ6XZB0 460 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 TTLL7Q6ZT98 887 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 USP53Q70EK8 1073 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 MIB1Q86YT6 1006 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 ADGRG2Q8IZP9 1017 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 TP53I13Q8NBR0 393 aaPredicted RBP5.71□□□□□ -1.5
GTF3A-207ENST00000482655 SYT8Q8NBV8 401 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 RELTQ969Z4 430 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 ZBTB8AQ96BR9 441 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 C1orf159Q96HA4 380 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 C20orf173Q96LM9 149 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 NGRNQ9NPE2 291 aaKnown RBP5.71□□□□□ -1.5
GTF3A-207ENST00000482655 USP40Q9NVE5 1235 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 RTEL1Q9NZ71 1219 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 NTMQ9P121 344 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 FBXL7Q9UJT9 491 aa5.71□□□□□ -1.5
GTF3A-207ENST00000482655 SH3D21A4FU49 640 aa5.7□□□□□ -1.5
GTF3A-207ENST00000482655 ARNTLO00327 626 aa5.7□□□□□ -1.5
GTF3A-207ENST00000482655 HGSO14964 777 aaPredicted RBP5.7□□□□□ -1.5
GTF3A-207ENST00000482655 MAFKO60675 156 aa5.7□□□□□ -1.5
GTF3A-207ENST00000482655 C8BP07358 591 aa5.7□□□□□ -1.5
GTF3A-207ENST00000482655 STEAP3Q658P3 488 aa5.7□□□□□ -1.5
GTF3A-207ENST00000482655 DENND5AQ6IQ26 1287 aa5.7□□□□□ -1.5
GTF3A-207ENST00000482655 ZNF526Q8TF50 670 aaPredicted RBP5.7□□□□□ -1.5
GTF3A-207ENST00000482655 EPB41L1Q9H4G0 881 aa5.7□□□□□ -1.5
GTF3A-207ENST00000482655 GPR27Q9NS67 375 aa5.7□□□□□ -1.5
GTF3A-207ENST00000482655 ZNF652Q9Y2D9 606 aa5.7□□□□□ -1.5
GTF3A-207ENST00000482655 PCDHB4Q9Y5E5 795 aa5.7□□□□□ -1.5
GTF3A-207ENST00000482655 NPFFR2Q9Y5X5 522 aa5.7□□□□□ -1.5
GTF3A-207ENST00000482655 TRAV20A0A0B4J274 112 aa5.69□□□□□ -1.5
GTF3A-207ENST00000482655 A0A1B0GTL3 188 aa5.69□□□□□ -1.5
GTF3A-207ENST00000482655 B8ZZF3 427 aa5.69□□□□□ -1.5
GTF3A-207ENST00000482655 PRODHO43272 600 aa5.69□□□□□ -1.5
GTF3A-207ENST00000482655 DLX3O60479 287 aa5.69□□□□□ -1.5
GTF3A-207ENST00000482655 SMAD4Q13485 552 aaKnown RBP5.69□□□□□ -1.5
GTF3A-207ENST00000482655 FAM126BQ8IXS8 530 aa5.69□□□□□ -1.5
GTF3A-207ENST00000482655 CARFQ8N187 725 aa5.69□□□□□ -1.5
GTF3A-207ENST00000482655 NOX5Q96PH1 765 aa5.69□□□□□ -1.5
GTF3A-207ENST00000482655 SPATA25Q9BR10 227 aa5.69□□□□□ -1.5
GTF3A-207ENST00000482655 PHF20Q9BVI0 1012 aa5.69□□□□□ -1.5
GTF3A-207ENST00000482655 CCDC85CA6NKD9 419 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms