RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 KRT71Q3SY84 523 aa14.02□□□□□ -0.17
VPS52-218ENST00000482399 CCDC91Q7Z6B0 441 aa14.02□□□□□ -0.17
VPS52-218ENST00000482399 FAM84BQ96KN1 310 aaPredicted RBP14.02□□□□□ -0.17
VPS52-218ENST00000482399 MYH8P13535 1937 aa14.02□□□□□ -0.17
VPS52-218ENST00000482399 GCOM1H8Y6P7 765 aaPredicted RBP14.02□□□□□ -0.17
VPS52-218ENST00000482399 MYZAPP0CAP1 466 aa14.02□□□□□ -0.17
VPS52-218ENST00000482399 ABCB4P21439 1286 aa14.02□□□□□ -0.17
VPS52-218ENST00000482399 HNRNPH1P31943 449 aaKnown RBP14.02□□□□□ -0.17
VPS52-218ENST00000482399 TNNC1P63316 161 aa14.02□□□□□ -0.17
VPS52-218ENST00000482399 NPY5RQ15761 445 aa14.02□□□□□ -0.17
VPS52-218ENST00000482399 MCTP2Q6DN12 878 aa14.02□□□□□ -0.17
VPS52-218ENST00000482399 PLAAQ9Y263 795 aa14.02□□□□□ -0.17
VPS52-218ENST00000482399 RHOBTB3O94955 611 aa14.01□□□□□ -0.17
VPS52-218ENST00000482399 SF3B2Q13435 895 aaKnown RBP14.01□□□□□ -0.17
VPS52-218ENST00000482399 MAN2A1Q16706 1144 aa14.01□□□□□ -0.17
VPS52-218ENST00000482399 RETREG2Q8NC44 543 aa14.01□□□□□ -0.17
VPS52-218ENST00000482399 LARP4BQ92615 738 aaKnown RBP14.01□□□□□ -0.17
VPS52-218ENST00000482399 TMEM110-MUSTN1A8MSY1 372 aa14.01□□□□□ -0.17
VPS52-218ENST00000482399 TMOD1P28289 359 aa14.01□□□□□ -0.17
VPS52-218ENST00000482399 UBE2SQ16763 222 aa14.01□□□□□ -0.17
VPS52-218ENST00000482399 BRINP3Q76B58 766 aa14.01□□□□□ -0.17
VPS52-218ENST00000482399 CLEC10AQ8IUN9 316 aa14.01□□□□□ -0.17
VPS52-218ENST00000482399 NLRP3Q96P20 1036 aa14.01□□□□□ -0.17
VPS52-218ENST00000482399 DDX47Q9H0S4 455 aaKnown RBP14.01□□□□□ -0.17
VPS52-218ENST00000482399 TDP2O95551 362 aa14□□□□□ -0.17
VPS52-218ENST00000482399 EMBQ6PCB8 327 aa14□□□□□ -0.17
VPS52-218ENST00000482399 C3orf67Q6ZVT6 689 aa14□□□□□ -0.17
VPS52-218ENST00000482399 ZNF507Q8TCN5 953 aa14□□□□□ -0.17
VPS52-218ENST00000482399 DDX12PQ92771 950 aa14□□□□□ -0.17
VPS52-218ENST00000482399 PACSIN1Q9BY11 444 aa14□□□□□ -0.17
VPS52-218ENST00000482399 SEMA6BQ9H3T3 888 aa14□□□□□ -0.17
VPS52-218ENST00000482399 MINPP1Q9UNW1 487 aa14□□□□□ -0.17
VPS52-218ENST00000482399 MYMKA6NI61 221 aa14□□□□□ -0.17
VPS52-218ENST00000482399 ASIC2Q16515 512 aa14□□□□□ -0.17
VPS52-218ENST00000482399 TTMPQ5BVD1 217 aa14□□□□□ -0.17
VPS52-218ENST00000482399 HAUS3Q68CZ6 603 aa14□□□□□ -0.17
VPS52-218ENST00000482399 MYCBPQ99417 103 aaPredicted RBP14□□□□□ -0.17
VPS52-218ENST00000482399 BRIP1Q9BX63 1249 aa14□□□□□ -0.17
VPS52-218ENST00000482399 SALL4Q9UJQ4 1053 aa14□□□□□ -0.17
VPS52-218ENST00000482399 TNS3Q68CZ2 1445 aa14□□□□□ -0.17
VPS52-218ENST00000482399 BAG3O95817 575 aa14□□□□□ -0.17
VPS52-218ENST00000482399 KRT13P13646 458 aa14□□□□□ -0.17
VPS52-218ENST00000482399 KLRC1P26715 233 aa14□□□□□ -0.17
VPS52-218ENST00000482399 AARSP49588 968 aaKnown RBP eCLIP14□□□□□ -0.17
VPS52-218ENST00000482399 RPS8P62241 208 aaKnown RBP14□□□□□ -0.17
VPS52-218ENST00000482399 KRT25Q7Z3Z0 450 aa14□□□□□ -0.17
VPS52-218ENST00000482399 DAAM2Q86T65 1068 aa14□□□□□ -0.17
VPS52-218ENST00000482399 CCDC25Q86WR0 208 aa14□□□□□ -0.17
VPS52-218ENST00000482399 MYOCDQ8IZQ8 938 aa14□□□□□ -0.17
VPS52-218ENST00000482399 SH3RF3Q8TEJ3 882 aaPredicted RBP14□□□□□ -0.17
VPS52-218ENST00000482399 KAT2BQ92831 832 aa14□□□□□ -0.17
VPS52-218ENST00000482399 EYA3Q99504 573 aa14□□□□□ -0.17
VPS52-218ENST00000482399 TMEM47Q9BQJ4 181 aa14□□□□□ -0.17
VPS52-218ENST00000482399 CD248Q9HCU0 757 aa14□□□□□ -0.17
VPS52-218ENST00000482399 ARPP21Q9UBL0 812 aaPredicted RBP14□□□□□ -0.17
VPS52-218ENST00000482399 RPSAP08865 295 aaKnown RBP13.99□□□□□ -0.17
VPS52-218ENST00000482399 GUCY2CP25092 1073 aa13.99□□□□□ -0.17
VPS52-218ENST00000482399 LSP1P33241 339 aa13.99□□□□□ -0.17
VPS52-218ENST00000482399 HDLBPQ00341 1268 aaKnown RBP13.99□□□□□ -0.17
VPS52-218ENST00000482399 MKRN4PQ13434 485 aaPredicted RBP13.99□□□□□ -0.17
VPS52-218ENST00000482399 ZNF34Q8IZ26 560 aa13.99□□□□□ -0.17
VPS52-218ENST00000482399 NSUN4Q96CB9 384 aaKnown RBP13.99□□□□□ -0.17
VPS52-218ENST00000482399 NOVA2Q9UNW9 492 aaKnown RBP13.99□□□□□ -0.17
VPS52-218ENST00000482399 KRIT1O00522 736 aa13.99□□□□□ -0.17
VPS52-218ENST00000482399 BUB1BO60566 1050 aaPredicted RBP13.99□□□□□ -0.17
VPS52-218ENST00000482399 SLC16A2P36021 539 aa13.99□□□□□ -0.17
VPS52-218ENST00000482399 PARP10Q53GL7 1025 aa13.99□□□□□ -0.17
VPS52-218ENST00000482399 PNMA8AQ86V59 439 aaPredicted RBP13.99□□□□□ -0.17
VPS52-218ENST00000482399 TBC1D31Q96DN5 1066 aa13.99□□□□□ -0.17
VPS52-218ENST00000482399 LMO7Q8WWI1 1683 aa13.99□□□□□ -0.17
VPS52-218ENST00000482399 KLRC4O43908 158 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 ACTN1P12814 892 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 PLS1Q14651 629 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 FAM83BQ5T0W9 1011 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 KIAA0895Q8NCT3 520 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 DYDC1Q8WWB3 177 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 TNFRSF25Q93038 417 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 PLAGL2Q9UPG8 496 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 C5P01031 1676 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 LOC102724428A0A0B4J2F2 783 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 NPHP3-ACAD11A0A0J9YXS1 232 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 MEIS1O00470 390 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 IFNAR2P48551 515 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 SIK1P57059 783 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 KCNB1Q14721 858 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 FAM26FQ5R3K3 315 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 PEX26Q7Z412 305 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 TEX11Q8IYF3 940 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 AENQ8WTP8 325 aaKnown RBP13.98□□□□□ -0.17
VPS52-218ENST00000482399 SLAIN2Q9P270 581 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 PCDHB13Q9Y5F0 798 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 RCAN1P53805 252 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 TXNRD3Q86VQ6 643 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 TLR10Q9BXR5 811 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 ATP8A2Q9NTI2 1148 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 PANK4Q9NVE7 773 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 KBTBD4Q9NVX7 518 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 BAIAP2L1Q9UHR4 511 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 KIAA1024Q9UPX6 916 aa13.98□□□□□ -0.17
VPS52-218ENST00000482399 ATP8A1Q9Y2Q0 1164 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms