RNA–Protein interactions for RNA: ENST00000482289.5

SFXN5-214, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 895 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-214ENST00000482289 CCDC82Q8N4S0 544 aa23.27■■□□□ 1.32
SFXN5-214ENST00000482289 SMARCC2Q8TAQ2 1214 aa23.27■■□□□ 1.32
SFXN5-214ENST00000482289 COPS5Q92905 334 aa23.27■■□□□ 1.32
SFXN5-214ENST00000482289 MRVI1Q9Y6F6 885 aa23.27■■□□□ 1.32
SFXN5-214ENST00000482289 FRMPD4Q14CM0 1322 aa23.27■■□□□ 1.32
SFXN5-214ENST00000482289 GOLGA8AA7E2F4 631 aa23.26■■□□□ 1.31
SFXN5-214ENST00000482289 GOLGA8BA8MQT2 603 aa23.26■■□□□ 1.31
SFXN5-214ENST00000482289 RPS6KB1P23443 525 aa23.26■■□□□ 1.31
SFXN5-214ENST00000482289 PURAQ00577 322 aaKnown RBP23.26■■□□□ 1.31
SFXN5-214ENST00000482289 Q6ZUG5 572 aa23.26■■□□□ 1.31
SFXN5-214ENST00000482289 BADQ92934 168 aa23.26■■□□□ 1.31
SFXN5-214ENST00000482289 MTG1Q9BT17 334 aaPredicted RBP23.26■■□□□ 1.31
SFXN5-214ENST00000482289 CNTNAP5Q8WYK1 1306 aa23.26■■□□□ 1.31
SFXN5-214ENST00000482289 RANBP2P49792 3224 aaKnown RBP23.25■■□□□ 1.31
SFXN5-214ENST00000482289 STAM2O75886 525 aa23.25■■□□□ 1.31
SFXN5-214ENST00000482289 MYL3P08590 195 aa23.25■■□□□ 1.31
SFXN5-214ENST00000482289 CPA1P15085 419 aa23.25■■□□□ 1.31
SFXN5-214ENST00000482289 LY6KQ17RY6 165 aa23.25■■□□□ 1.31
SFXN5-214ENST00000482289 PCDH10Q9P2E7 1040 aa23.25■■□□□ 1.31
SFXN5-214ENST00000482289 DDX41Q9UJV9 622 aaKnown RBP23.25■■□□□ 1.31
SFXN5-214ENST00000482289 TBX21Q9UL17 535 aa23.25■■□□□ 1.31
SFXN5-214ENST00000482289 NAP1L2Q9ULW6 460 aaPredicted RBP23.25■■□□□ 1.31
SFXN5-214ENST00000482289 CCDC196A0A1B0GTZ2 297 aa23.24■■□□□ 1.31
SFXN5-214ENST00000482289 CASTP20810 708 aaKnown RBP23.24■■□□□ 1.31
SFXN5-214ENST00000482289 ARHGAP1Q07960 439 aa23.24■■□□□ 1.31
SFXN5-214ENST00000482289 LRIT3Q3SXY7 679 aa23.24■■□□□ 1.31
SFXN5-214ENST00000482289 IL31RAQ8NI17 732 aa23.24■■□□□ 1.31
SFXN5-214ENST00000482289 BRF1Q92994 677 aa23.24■■□□□ 1.31
SFXN5-214ENST00000482289 EMID1Q96A84 441 aaPredicted RBP23.24■■□□□ 1.31
SFXN5-214ENST00000482289 USP26Q9BXU7 913 aa23.24■■□□□ 1.31
SFXN5-214ENST00000482289 PSTPIP2Q9H939 334 aa23.24■■□□□ 1.31
SFXN5-214ENST00000482289 hCG_1642624A0A1W2PR95 340 aa23.23■■□□□ 1.31
SFXN5-214ENST00000482289 hCG_1984214I3L0E3 225 aa23.23■■□□□ 1.31
SFXN5-214ENST00000482289 MEIS2O14770 477 aa23.23■■□□□ 1.31
SFXN5-214ENST00000482289 CD4P01730 458 aa23.23■■□□□ 1.31
SFXN5-214ENST00000482289 TGFB3P10600 412 aa23.23■■□□□ 1.31
SFXN5-214ENST00000482289 METAP2P50579 478 aaKnown RBP eCLIP23.23■■□□□ 1.31
SFXN5-214ENST00000482289 PSMC6P62333 389 aa23.23■■□□□ 1.31
SFXN5-214ENST00000482289 LAMC2Q13753 1193 aa23.23■■□□□ 1.31
SFXN5-214ENST00000482289 XRRA1Q6P2D8 792 aa23.23■■□□□ 1.31
SFXN5-214ENST00000482289 HEATR3Q7Z4Q2 680 aa23.23■■□□□ 1.31
SFXN5-214ENST00000482289 TEX2Q8IWB9 1127 aa23.23■■□□□ 1.31
SFXN5-214ENST00000482289 ZNF713Q8N859 430 aaPredicted RBP23.23■■□□□ 1.31
SFXN5-214ENST00000482289 AGXT2Q9BYV1 514 aa23.23■■□□□ 1.31
SFXN5-214ENST00000482289 GRIN2DO15399 1336 aa23.23■■□□□ 1.31
SFXN5-214ENST00000482289 SCN10AQ9Y5Y9 1956 aa23.22■■□□□ 1.31
SFXN5-214ENST00000482289 RGS20O76081 388 aa23.22■■□□□ 1.31
SFXN5-214ENST00000482289 TIMP1P01033 207 aa23.22■■□□□ 1.31
SFXN5-214ENST00000482289 APOBRQ0VD83 1088 aa23.22■■□□□ 1.31
SFXN5-214ENST00000482289 FUT2Q10981 343 aa23.22■■□□□ 1.31
SFXN5-214ENST00000482289 GNPTABQ3T906 1256 aa23.22■■□□□ 1.31
SFXN5-214ENST00000482289 PPP1R18Q6NYC8 613 aa23.22■■□□□ 1.31
SFXN5-214ENST00000482289 USP17L6PQ6QN14 398 aa23.22■■□□□ 1.31
SFXN5-214ENST00000482289 DHX37Q8IY37 1157 aaKnown RBP23.22■■□□□ 1.31
SFXN5-214ENST00000482289 AFG1LQ8WV93 481 aa23.22■■□□□ 1.31
SFXN5-214ENST00000482289 NID2Q14112 1375 aa23.22■■□□□ 1.31
SFXN5-214ENST00000482289 MMP3P08254 477 aa23.21■■□□□ 1.31
SFXN5-214ENST00000482289 ITGB8P26012 769 aa23.21■■□□□ 1.31
SFXN5-214ENST00000482289 RUFY3Q7L099 469 aa23.21■■□□□ 1.31
SFXN5-214ENST00000482289 TM6SF1Q9BZW5 370 aa23.21■■□□□ 1.31
SFXN5-214ENST00000482289 FAM217BQ9NTX9 383 aaPredicted RBP23.21■■□□□ 1.31
SFXN5-214ENST00000482289 EIF5BO60841 1220 aaKnown RBP23.2■■□□□ 1.3
SFXN5-214ENST00000482289 CDC27P30260 824 aa23.2■■□□□ 1.3
SFXN5-214ENST00000482289 FPGSQ05932 587 aa23.2■■□□□ 1.3
SFXN5-214ENST00000482289 DGKDQ16760 1214 aa23.2■■□□□ 1.3
SFXN5-214ENST00000482289 PCNX4Q63HM2 1172 aa23.2■■□□□ 1.3
SFXN5-214ENST00000482289 WWC2Q6AWC2 1192 aa23.2■■□□□ 1.3
SFXN5-214ENST00000482289 PPTC7Q8NI37 304 aa23.2■■□□□ 1.3
SFXN5-214ENST00000482289 GPKOWQ92917 476 aaPredicted RBP eCLIP23.2■■□□□ 1.3
SFXN5-214ENST00000482289 INPP4AQ96PE3 977 aaPredicted RBP23.2■■□□□ 1.3
SFXN5-214ENST00000482289 ZSWIM6Q9HCJ5 1215 aa23.2■■□□□ 1.3
SFXN5-214ENST00000482289 CYP46A1Q9Y6A2 500 aa23.2■■□□□ 1.3
SFXN5-214ENST00000482289 V9GY48 417 aaPredicted RBP23.2■■□□□ 1.3
SFXN5-214ENST00000482289 SPDYE3A6NKU9 549 aa23.19■■□□□ 1.3
SFXN5-214ENST00000482289 SUPT20HL2P0C7V6 817 aa23.19■■□□□ 1.3
SFXN5-214ENST00000482289 ICAM3P32942 547 aa23.19■■□□□ 1.3
SFXN5-214ENST00000482289 MRPS9P82933 396 aaKnown RBP23.19■■□□□ 1.3
SFXN5-214ENST00000482289 PTPN11Q06124 597 aaPredicted RBP23.19■■□□□ 1.3
SFXN5-214ENST00000482289 MFSD5Q6N075 450 aa23.19■■□□□ 1.3
SFXN5-214ENST00000482289 NFRKBQ6P4R8 1299 aa23.19■■□□□ 1.3
SFXN5-214ENST00000482289 ALDH8A1Q9H2A2 487 aaPredicted RBP23.19■■□□□ 1.3
SFXN5-214ENST00000482289 EHMT1Q9H9B1 1298 aa23.19■■□□□ 1.3
SFXN5-214ENST00000482289 MYH7BA7E2Y1 1941 aa23.19■■□□□ 1.3
SFXN5-214ENST00000482289 B4GALT4O60513 344 aa23.18■■□□□ 1.3
SFXN5-214ENST00000482289 UBA1P22314 1058 aaKnown RBP23.18■■□□□ 1.3
SFXN5-214ENST00000482289 ADD1P35611 737 aaKnown RBP23.18■■□□□ 1.3
SFXN5-214ENST00000482289 NAPAP54920 295 aa23.18■■□□□ 1.3
SFXN5-214ENST00000482289 EVCP57679 992 aa23.18■■□□□ 1.3
SFXN5-214ENST00000482289 NBPF20Q3BBV1 942 aa23.18■■□□□ 1.3
SFXN5-214ENST00000482289 CELF3Q5SZQ8 465 aaKnown RBP23.18■■□□□ 1.3
SFXN5-214ENST00000482289 TMEM199Q8N511 208 aa23.18■■□□□ 1.3
SFXN5-214ENST00000482289 GLT8D2Q9H1C3 349 aa23.18■■□□□ 1.3
SFXN5-214ENST00000482289 SOX1O00570 391 aaPredicted RBP23.17■■□□□ 1.3
SFXN5-214ENST00000482289 FIBPO43427 364 aa23.17■■□□□ 1.3
SFXN5-214ENST00000482289 GGPS1O95749 300 aa23.17■■□□□ 1.3
SFXN5-214ENST00000482289 FAM47CQ5HY64 1035 aa23.17■■□□□ 1.3
SFXN5-214ENST00000482289 MYSM1Q5VVJ2 828 aa23.17■■□□□ 1.3
SFXN5-214ENST00000482289 GPR153Q6NV75 609 aa23.17■■□□□ 1.3
SFXN5-214ENST00000482289 NLRX1Q86UT6 975 aa23.17■■□□□ 1.3
SFXN5-214ENST00000482289 ZFP91Q96JP5 570 aaPredicted RBP23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms