RNA–Protein interactions for RNA: ENST00000482162.1

TMEM39A-207, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 554 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-207ENST00000482162 ZNF365Q70YC5 407 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 ZNF654Q8IZM8 581 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 AFG1LQ8WV93 481 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 KAT2BQ92831 832 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 CTAGE1Q96RT6 745 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 LZTS2Q9BRK4 669 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 FRMPD4Q14CM0 1322 aa11.28□□□□□ -0.6
TMEM39A-207ENST00000482162 MYH6P13533 1939 aa11.27□□□□□ -0.6
TMEM39A-207ENST00000482162 HAS3O00219 553 aa11.27□□□□□ -0.61
TMEM39A-207ENST00000482162 PRC1O43663 620 aa11.27□□□□□ -0.61
TMEM39A-207ENST00000482162 MYL3P08590 195 aa11.27□□□□□ -0.61
TMEM39A-207ENST00000482162 TGFB3P10600 412 aa11.27□□□□□ -0.61
TMEM39A-207ENST00000482162 EIF2AK2P19525 551 aaKnown RBP11.27□□□□□ -0.61
TMEM39A-207ENST00000482162 LAMC2Q13753 1193 aa11.27□□□□□ -0.61
TMEM39A-207ENST00000482162 ZNF697Q5TEC3 545 aa11.27□□□□□ -0.61
TMEM39A-207ENST00000482162 PSRC1Q6PGN9 363 aaPredicted RBP11.27□□□□□ -0.61
TMEM39A-207ENST00000482162 SGMS1Q86VZ5 419 aa11.27□□□□□ -0.61
TMEM39A-207ENST00000482162 SKAP1Q86WV1 359 aa11.27□□□□□ -0.61
TMEM39A-207ENST00000482162 IL31RAQ8NI17 732 aa11.27□□□□□ -0.61
TMEM39A-207ENST00000482162 CDX2Q99626 313 aaPredicted RBP11.27□□□□□ -0.61
TMEM39A-207ENST00000482162 PPP1R12CQ9BZL4 782 aa11.27□□□□□ -0.61
TMEM39A-207ENST00000482162 TRMT13Q9NUP7 481 aaKnown RBP11.27□□□□□ -0.61
TMEM39A-207ENST00000482162 A0A0C4DFX4 3053 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 GCOM1H8Y6P7 765 aaPredicted RBP11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 PIK3CDO00329 1044 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 PITPNM1O00562 1244 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 PPFIA4O75335 1185 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 NEFLP07196 543 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 MMP3P08254 477 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 POLR2MP0CAP2 368 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 ACRP10323 421 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 CYP2C9P11712 490 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 HOXA13P31271 388 aaPredicted RBP11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 ICAM3P32942 547 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 KIF5BP33176 963 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 GNAQP50148 359 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 EXOSC10Q01780 885 aaKnown RBP11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 RBL2Q08999 1139 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 PGM5Q15124 567 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 CELF3Q5SZQ8 465 aaKnown RBP11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 MYSM1Q5VVJ2 828 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 KCNV1Q6PIU1 500 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 HOMER1Q86YM7 354 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 SRBD1Q8N5C6 995 aaKnown RBP11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 PPTC7Q8NI37 304 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 KCNB2Q92953 911 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 KIAA1217Q5T5P2 1943 aa11.26□□□□□ -0.61
TMEM39A-207ENST00000482162 SPATA31C2B4DYI2 1134 aa11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 MEIS2O14770 477 aa11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 STAM2O75886 525 aa11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 F2P00734 622 aa11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 FGBP02675 491 aa11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 PFKMP08237 780 aa11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 IQCF3P0C7M6 154 aa11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 CALM1P0DP23 149 aa11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 CALM2P0DP24 149 aa11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 CALM3P0DP25 149 aa11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 CASTP20810 708 aaKnown RBP11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 HOXD11P31277 338 aaPredicted RBP11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 MRPS9P82933 396 aaKnown RBP11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 SP2Q02086 613 aa11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 GPNMBQ14956 572 aa11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 RPUSD2Q8IZ73 545 aaKnown RBP11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 CTCFLQ8NI51 663 aaPredicted RBP11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 INPP4AQ96PE3 977 aaPredicted RBP11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 CXXC1Q9P0U4 656 aaPredicted RBP11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 MRVI1Q9Y6F6 885 aa11.25□□□□□ -0.61
TMEM39A-207ENST00000482162 DNAJB2P25686 324 aa11.24□□□□□ -0.61
TMEM39A-207ENST00000482162 RFC2P35250 354 aa11.24□□□□□ -0.61
TMEM39A-207ENST00000482162 CCL23P55773 120 aa11.24□□□□□ -0.61
TMEM39A-207ENST00000482162 FUT2Q10981 343 aa11.24□□□□□ -0.61
TMEM39A-207ENST00000482162 DGKDQ16760 1214 aa11.24□□□□□ -0.61
TMEM39A-207ENST00000482162 XRRA1Q6P2D8 792 aa11.24□□□□□ -0.61
TMEM39A-207ENST00000482162 CASC1Q6TDU7 716 aa11.24□□□□□ -0.61
TMEM39A-207ENST00000482162 TEX2Q8IWB9 1127 aa11.24□□□□□ -0.61
TMEM39A-207ENST00000482162 RASEFQ8IZ41 740 aa11.24□□□□□ -0.61
TMEM39A-207ENST00000482162 FANCBQ8NB91 859 aa11.24□□□□□ -0.61
TMEM39A-207ENST00000482162 RRP36Q96EU6 259 aaKnown RBP11.24□□□□□ -0.61
TMEM39A-207ENST00000482162 MYL10Q9BUA6 226 aa11.24□□□□□ -0.61
TMEM39A-207ENST00000482162 PBX4Q9BYU1 374 aa11.24□□□□□ -0.61
TMEM39A-207ENST00000482162 ANO2Q9NQ90 1003 aa11.24□□□□□ -0.61
TMEM39A-207ENST00000482162 MYO9BQ13459 2157 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 CUL9Q8IWT3 2517 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 GRXCR1A8MXD5 290 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 PLEKHA8P1O95397 391 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 MYCLP12524 364 aaPredicted RBP11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 CCND2P30279 289 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 HOXC8P31273 242 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 PBX2P40425 430 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 SEMA3FQ13275 785 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 GRIN2CQ14957 1233 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 HSDL1Q3SXM5 330 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 RNF20Q5VTR2 975 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 GDF6Q6KF10 455 aaPredicted RBP11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 TMTC3Q6ZXV5 915 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 DHX32Q7L7V1 743 aaKnown RBP11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 FCHSD1Q86WN1 690 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 DHX37Q8IY37 1157 aaKnown RBP11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 TIFAQ96CG3 184 aa11.23□□□□□ -0.61
TMEM39A-207ENST00000482162 FAM161BQ96MY7 647 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 120.3 ms