RNA–Protein interactions for RNA: ENST00000482140.5

OPTN-210, Transcript of optineurin, humanhuman

TSL 3

Gene OPTN, Length 667 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OPTN-210ENST00000482140 TDHQ8IZJ6 230 aa17.08■□□□□ 0.32
OPTN-210ENST00000482140 TRIM43Q96BQ3 446 aaPredicted RBP17.08■□□□□ 0.32
OPTN-210ENST00000482140 CNTNAP5Q8WYK1 1306 aa17.07■□□□□ 0.32
OPTN-210ENST00000482140 KPNA6O60684 536 aa17.07■□□□□ 0.32
OPTN-210ENST00000482140 METAP2P50579 478 aaKnown RBP eCLIP17.07■□□□□ 0.32
OPTN-210ENST00000482140 CDK7P50613 346 aa17.07■□□□□ 0.32
OPTN-210ENST00000482140 RCAN1P53805 252 aa17.07■□□□□ 0.32
OPTN-210ENST00000482140 APOBRQ0VD83 1088 aa17.07■□□□□ 0.32
OPTN-210ENST00000482140 FAAP100Q0VG06 881 aa17.07■□□□□ 0.32
OPTN-210ENST00000482140 CCDC62Q6P9F0 684 aa17.07■□□□□ 0.32
OPTN-210ENST00000482140 BADQ92934 168 aa17.07■□□□□ 0.32
OPTN-210ENST00000482140 BRF1Q92994 677 aa17.07■□□□□ 0.32
OPTN-210ENST00000482140 MTG1Q9BT17 334 aaPredicted RBP17.07■□□□□ 0.32
OPTN-210ENST00000482140 SEZ6LQ9BYH1 1024 aa17.07■□□□□ 0.32
OPTN-210ENST00000482140 CCDC196A0A1B0GTZ2 297 aa17.06■□□□□ 0.32
OPTN-210ENST00000482140 KIAA0355O15063 1070 aa17.06■□□□□ 0.32
OPTN-210ENST00000482140 PSMC6P62333 389 aa17.06■□□□□ 0.32
OPTN-210ENST00000482140 PURAQ00577 322 aaKnown RBP17.06■□□□□ 0.32
OPTN-210ENST00000482140 KCNV1Q6PIU1 500 aa17.06■□□□□ 0.32
OPTN-210ENST00000482140 USP17L6PQ6QN14 398 aa17.06■□□□□ 0.32
OPTN-210ENST00000482140 VSIG10LQ86VR7 867 aa17.06■□□□□ 0.32
OPTN-210ENST00000482140 IL31RAQ8NI17 732 aa17.06■□□□□ 0.32
OPTN-210ENST00000482140 USP26Q9BXU7 913 aa17.06■□□□□ 0.32
OPTN-210ENST00000482140 PSTPIP2Q9H939 334 aa17.06■□□□□ 0.32
OPTN-210ENST00000482140 A6NJR5 290 aa17.05■□□□□ 0.32
OPTN-210ENST00000482140 PIK3CDO00329 1044 aa17.05■□□□□ 0.32
OPTN-210ENST00000482140 ARHGAP1Q07960 439 aa17.05■□□□□ 0.32
OPTN-210ENST00000482140 GNPTABQ3T906 1256 aa17.05■□□□□ 0.32
OPTN-210ENST00000482140 FAM126BQ8IXS8 530 aa17.05■□□□□ 0.32
OPTN-210ENST00000482140 SLC43A3Q8NBI5 491 aa17.05■□□□□ 0.32
OPTN-210ENST00000482140 AFG1LQ8WV93 481 aa17.05■□□□□ 0.32
OPTN-210ENST00000482140 GPKOWQ92917 476 aaPredicted RBP eCLIP17.05■□□□□ 0.32
OPTN-210ENST00000482140 DDX41Q9UJV9 622 aaKnown RBP17.05■□□□□ 0.32
OPTN-210ENST00000482140 STAM2O75886 525 aa17.04■□□□□ 0.32
OPTN-210ENST00000482140 CDC27P30260 824 aa17.04■□□□□ 0.32
OPTN-210ENST00000482140 NAPAP54920 295 aa17.04■□□□□ 0.32
OPTN-210ENST00000482140 FAM47CQ5HY64 1035 aa17.04■□□□□ 0.32
OPTN-210ENST00000482140 RUFY3Q7L099 469 aa17.04■□□□□ 0.32
OPTN-210ENST00000482140 DHX37Q8IY37 1157 aaKnown RBP17.04■□□□□ 0.32
OPTN-210ENST00000482140 ZFP91Q96JP5 570 aaPredicted RBP17.04■□□□□ 0.32
OPTN-210ENST00000482140 CYP46A1Q9Y6A2 500 aa17.04■□□□□ 0.32
OPTN-210ENST00000482140 V9GY48 417 aaPredicted RBP17.04■□□□□ 0.32
OPTN-210ENST00000482140 FRMPD4Q14CM0 1322 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 SCN10AQ9Y5Y9 1956 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 SPDYE3A6NKU9 549 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 hCG_1984214I3L0E3 225 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 MEIS2O14770 477 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 SLC34A2O95436 690 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 MMP3P08254 477 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 TGFB3P10600 412 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 CHMP4BP1P59074 171 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 FPGSQ05932 587 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 LAMC2Q13753 1193 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 WWC2Q6AWC2 1192 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 PPP1R18Q6NYC8 613 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 FBXL16Q8N461 479 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 ZNF713Q8N859 430 aaPredicted RBP17.03■□□□□ 0.32
OPTN-210ENST00000482140 EHMT1Q9H9B1 1298 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 ZSWIM6Q9HCJ5 1215 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 TBX21Q9UL17 535 aa17.03■□□□□ 0.32
OPTN-210ENST00000482140 GRIN2DO15399 1336 aa17.02■□□□□ 0.32
OPTN-210ENST00000482140 EIF5BO60841 1220 aaKnown RBP17.02■□□□□ 0.32
OPTN-210ENST00000482140 RGS20O76081 388 aa17.02■□□□□ 0.32
OPTN-210ENST00000482140 TIMP1P01033 207 aa17.02■□□□□ 0.32
OPTN-210ENST00000482140 CD4P01730 458 aa17.02■□□□□ 0.32
OPTN-210ENST00000482140 ITGB8P26012 769 aa17.02■□□□□ 0.32
OPTN-210ENST00000482140 ADD1P35611 737 aaKnown RBP17.02■□□□□ 0.32
OPTN-210ENST00000482140 AKAP17AQ02040 695 aaKnown RBP17.02■□□□□ 0.32
OPTN-210ENST00000482140 FUT2Q10981 343 aa17.02■□□□□ 0.32
OPTN-210ENST00000482140 DGKDQ16760 1214 aa17.02■□□□□ 0.32
OPTN-210ENST00000482140 UBE2SQ16763 222 aa17.02■□□□□ 0.32
OPTN-210ENST00000482140 XRRA1Q6P2D8 792 aa17.02■□□□□ 0.32
OPTN-210ENST00000482140 EMID1Q96A84 441 aaPredicted RBP17.02■□□□□ 0.32
OPTN-210ENST00000482140 AGXT2Q9BYV1 514 aa17.02■□□□□ 0.32
OPTN-210ENST00000482140 PPP1R12CQ9BZL4 782 aa17.02■□□□□ 0.32
OPTN-210ENST00000482140 TM6SF1Q9BZW5 370 aa17.02■□□□□ 0.32
OPTN-210ENST00000482140 FAM217BQ9NTX9 383 aaPredicted RBP17.02■□□□□ 0.32
OPTN-210ENST00000482140 B4GALT4O60513 344 aa17.01■□□□□ 0.31
OPTN-210ENST00000482140 GGPS1O95749 300 aa17.01■□□□□ 0.31
OPTN-210ENST00000482140 SUPT20HL2P0C7V6 817 aa17.01■□□□□ 0.31
OPTN-210ENST00000482140 MRPS9P82933 396 aaKnown RBP17.01■□□□□ 0.31
OPTN-210ENST00000482140 NBPF20Q3BBV1 942 aa17.01■□□□□ 0.31
OPTN-210ENST00000482140 LRIT3Q3SXY7 679 aa17.01■□□□□ 0.31
OPTN-210ENST00000482140 PCNX4Q63HM2 1172 aa17.01■□□□□ 0.31
OPTN-210ENST00000482140 PPTC7Q8NI37 304 aa17.01■□□□□ 0.31
OPTN-210ENST00000482140 SPATA33Q96N06 139 aa17.01■□□□□ 0.31
OPTN-210ENST00000482140 ALDH8A1Q9H2A2 487 aaPredicted RBP17.01■□□□□ 0.31
OPTN-210ENST00000482140 MLXIPQ9HAP2 919 aa17.01■□□□□ 0.31
OPTN-210ENST00000482140 RTEL1Q9NZ71 1219 aa17.01■□□□□ 0.31
OPTN-210ENST00000482140 NID2Q14112 1375 aa17.01■□□□□ 0.31
OPTN-210ENST00000482140 FIBPO43427 364 aa17■□□□□ 0.31
OPTN-210ENST00000482140 SORBS3O60504 671 aa17■□□□□ 0.31
OPTN-210ENST00000482140 UBA1P22314 1058 aaKnown RBP17■□□□□ 0.31
OPTN-210ENST00000482140 ADCY7P51828 1080 aa17■□□□□ 0.31
OPTN-210ENST00000482140 CELF3Q5SZQ8 465 aaKnown RBP17■□□□□ 0.31
OPTN-210ENST00000482140 MYSM1Q5VVJ2 828 aa17■□□□□ 0.31
OPTN-210ENST00000482140 MFSD5Q6N075 450 aa17■□□□□ 0.31
OPTN-210ENST00000482140 NFRKBQ6P4R8 1299 aa17■□□□□ 0.31
OPTN-210ENST00000482140 NLRX1Q86UT6 975 aa17■□□□□ 0.31
OPTN-210ENST00000482140 TMEM199Q8N511 208 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms