RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 TRIM43BA6NCK2 446 aa21.57■■□□□ 1.04
HSPG2-210ENST00000481644 PIK3CDO00329 1044 aa21.57■■□□□ 1.04
HSPG2-210ENST00000481644 GH1P01241 217 aa21.57■■□□□ 1.04
HSPG2-210ENST00000481644 MYL3P08590 195 aa21.57■■□□□ 1.04
HSPG2-210ENST00000481644 CDC27P30260 824 aa21.57■■□□□ 1.04
HSPG2-210ENST00000481644 CDK7P50613 346 aa21.57■■□□□ 1.04
HSPG2-210ENST00000481644 USP17L6PQ6QN14 398 aa21.57■■□□□ 1.04
HSPG2-210ENST00000481644 RUFY3Q7L099 469 aa21.57■■□□□ 1.04
HSPG2-210ENST00000481644 VSIG10LQ86VR7 867 aa21.57■■□□□ 1.04
HSPG2-210ENST00000481644 GPKOWQ92917 476 aaPredicted RBP eCLIP21.57■■□□□ 1.04
HSPG2-210ENST00000481644 TRIM43Q96BQ3 446 aaPredicted RBP21.57■■□□□ 1.04
HSPG2-210ENST00000481644 AGXT2Q9BYV1 514 aa21.57■■□□□ 1.04
HSPG2-210ENST00000481644 PSTPIP2Q9H939 334 aa21.57■■□□□ 1.04
HSPG2-210ENST00000481644 ZSWIM6Q9HCJ5 1215 aa21.57■■□□□ 1.04
HSPG2-210ENST00000481644 FAM217BQ9NTX9 383 aaPredicted RBP21.57■■□□□ 1.04
HSPG2-210ENST00000481644 FRMPD4Q14CM0 1322 aa21.56■■□□□ 1.04
HSPG2-210ENST00000481644 CCDC196A0A1B0GTZ2 297 aa21.56■■□□□ 1.04
HSPG2-210ENST00000481644 MEIS2O14770 477 aa21.56■■□□□ 1.04
HSPG2-210ENST00000481644 FAAP100Q0VG06 881 aa21.56■■□□□ 1.04
HSPG2-210ENST00000481644 FUT2Q10981 343 aa21.56■■□□□ 1.04
HSPG2-210ENST00000481644 ITGA7Q13683 1181 aa21.56■■□□□ 1.04
HSPG2-210ENST00000481644 TMEM39AQ9NV64 488 aa21.56■■□□□ 1.04
HSPG2-210ENST00000481644 CYP46A1Q9Y6A2 500 aa21.56■■□□□ 1.04
HSPG2-210ENST00000481644 MYH7BA7E2Y1 1941 aa21.56■■□□□ 1.04
HSPG2-210ENST00000481644 A6NJR5 290 aa21.55■■□□□ 1.04
HSPG2-210ENST00000481644 KIAA0355O15063 1070 aa21.55■■□□□ 1.04
HSPG2-210ENST00000481644 TLR3O15455 904 aaKnown RBP21.55■■□□□ 1.04
HSPG2-210ENST00000481644 PSMC6P62333 389 aa21.55■■□□□ 1.04
HSPG2-210ENST00000481644 PURAQ00577 322 aaKnown RBP21.55■■□□□ 1.04
HSPG2-210ENST00000481644 ARHGAP1Q07960 439 aa21.55■■□□□ 1.04
HSPG2-210ENST00000481644 WWC2Q6AWC2 1192 aa21.55■■□□□ 1.04
HSPG2-210ENST00000481644 ZFP91Q96JP5 570 aaPredicted RBP21.55■■□□□ 1.04
HSPG2-210ENST00000481644 TM6SF1Q9BZW5 370 aa21.55■■□□□ 1.04
HSPG2-210ENST00000481644 DDX41Q9UJV9 622 aaKnown RBP21.55■■□□□ 1.04
HSPG2-210ENST00000481644 V9GY48 417 aaPredicted RBP21.55■■□□□ 1.04
HSPG2-210ENST00000481644 NID2Q14112 1375 aa21.55■■□□□ 1.04
HSPG2-210ENST00000481644 KPNA6O60684 536 aa21.54■■□□□ 1.04
HSPG2-210ENST00000481644 RGS20O76081 388 aa21.54■■□□□ 1.04
HSPG2-210ENST00000481644 ADD1P35611 737 aaKnown RBP21.54■■□□□ 1.04
HSPG2-210ENST00000481644 FXR1P51114 621 aaKnown RBP eCLIP21.54■■□□□ 1.04
HSPG2-210ENST00000481644 KCNV1Q6PIU1 500 aa21.54■■□□□ 1.04
HSPG2-210ENST00000481644 FAM126BQ8IXS8 530 aa21.54■■□□□ 1.04
HSPG2-210ENST00000481644 SLC43A3Q8NBI5 491 aa21.54■■□□□ 1.04
HSPG2-210ENST00000481644 AFG1LQ8WV93 481 aa21.54■■□□□ 1.04
HSPG2-210ENST00000481644 BADQ92934 168 aa21.54■■□□□ 1.04
HSPG2-210ENST00000481644 MTG1Q9BT17 334 aaPredicted RBP21.54■■□□□ 1.04
HSPG2-210ENST00000481644 SEZ6LQ9BYH1 1024 aa21.54■■□□□ 1.04
HSPG2-210ENST00000481644 GRIN2DO15399 1336 aa21.54■■□□□ 1.04
HSPG2-210ENST00000481644 STAM2O75886 525 aa21.53■■□□□ 1.04
HSPG2-210ENST00000481644 RAG1P15918 1043 aa21.53■■□□□ 1.04
HSPG2-210ENST00000481644 NAPAP54920 295 aa21.53■■□□□ 1.04
HSPG2-210ENST00000481644 UBE2SQ16763 222 aa21.53■■□□□ 1.04
HSPG2-210ENST00000481644 TDHQ8IZJ6 230 aa21.53■■□□□ 1.04
HSPG2-210ENST00000481644 UPF3BQ9BZI7 483 aaKnown RBP21.53■■□□□ 1.04
HSPG2-210ENST00000481644 SCN10AQ9Y5Y9 1956 aa21.52■■□□□ 1.04
HSPG2-210ENST00000481644 RANBP2P49792 3224 aaKnown RBP21.52■■□□□ 1.04
HSPG2-210ENST00000481644 hCG_1984214I3L0E3 225 aa21.52■■□□□ 1.04
HSPG2-210ENST00000481644 MMP3P08254 477 aa21.52■■□□□ 1.04
HSPG2-210ENST00000481644 ITGB8P26012 769 aa21.52■■□□□ 1.04
HSPG2-210ENST00000481644 MRPS9P82933 396 aaKnown RBP21.52■■□□□ 1.04
HSPG2-210ENST00000481644 TOB2Q14106 344 aaPredicted RBP21.52■■□□□ 1.04
HSPG2-210ENST00000481644 GNPTABQ3T906 1256 aa21.52■■□□□ 1.04
HSPG2-210ENST00000481644 PPP1R18Q6NYC8 613 aa21.52■■□□□ 1.04
HSPG2-210ENST00000481644 DHX37Q8IY37 1157 aaKnown RBP21.52■■□□□ 1.04
HSPG2-210ENST00000481644 ZNF713Q8N859 430 aaPredicted RBP21.52■■□□□ 1.04
HSPG2-210ENST00000481644 EMID1Q96A84 441 aaPredicted RBP21.52■■□□□ 1.04
HSPG2-210ENST00000481644 TBX21Q9UL17 535 aa21.52■■□□□ 1.04
HSPG2-210ENST00000481644 SPDYE3A6NKU9 549 aa21.51■■□□□ 1.03
HSPG2-210ENST00000481644 STXBP3O00186 592 aa21.51■■□□□ 1.03
HSPG2-210ENST00000481644 CD4P01730 458 aa21.51■■□□□ 1.03
HSPG2-210ENST00000481644 TGFB3P10600 412 aa21.51■■□□□ 1.03
HSPG2-210ENST00000481644 EVCP57679 992 aa21.51■■□□□ 1.03
HSPG2-210ENST00000481644 LAMC2Q13753 1193 aa21.51■■□□□ 1.03
HSPG2-210ENST00000481644 PCNX4Q63HM2 1172 aa21.51■■□□□ 1.03
HSPG2-210ENST00000481644 EIF5BO60841 1220 aaKnown RBP21.5■■□□□ 1.03
HSPG2-210ENST00000481644 UBA1P22314 1058 aaKnown RBP21.5■■□□□ 1.03
HSPG2-210ENST00000481644 PDIA3P30101 505 aaKnown RBP21.5■■□□□ 1.03
HSPG2-210ENST00000481644 ADCY7P51828 1080 aa21.5■■□□□ 1.03
HSPG2-210ENST00000481644 TYW1BQ6NUM6 668 aa21.5■■□□□ 1.03
HSPG2-210ENST00000481644 XRRA1Q6P2D8 792 aa21.5■■□□□ 1.03
HSPG2-210ENST00000481644 INPP4AQ96PE3 977 aaPredicted RBP21.5■■□□□ 1.03
HSPG2-210ENST00000481644 PDRG1Q9NUG6 133 aa21.5■■□□□ 1.03
HSPG2-210ENST00000481644 BARHL2Q9NY43 387 aa21.5■■□□□ 1.03
HSPG2-210ENST00000481644 RTEL1Q9NZ71 1219 aa21.5■■□□□ 1.03
HSPG2-210ENST00000481644 SORBS3O60504 671 aa21.49■■□□□ 1.03
HSPG2-210ENST00000481644 GGPS1O95749 300 aa21.49■■□□□ 1.03
HSPG2-210ENST00000481644 TIMP1P01033 207 aa21.49■■□□□ 1.03
HSPG2-210ENST00000481644 CCT2P78371 535 aaKnown RBP21.49■■□□□ 1.03
HSPG2-210ENST00000481644 DGKDQ16760 1214 aa21.49■■□□□ 1.03
HSPG2-210ENST00000481644 PFKFB3Q16875 520 aaPredicted RBP21.49■■□□□ 1.03
HSPG2-210ENST00000481644 NBPF20Q3BBV1 942 aa21.49■■□□□ 1.03
HSPG2-210ENST00000481644 FAM47CQ5HY64 1035 aa21.49■■□□□ 1.03
HSPG2-210ENST00000481644 CELF3Q5SZQ8 465 aaKnown RBP21.49■■□□□ 1.03
HSPG2-210ENST00000481644 PPTC7Q8NI37 304 aa21.49■■□□□ 1.03
HSPG2-210ENST00000481644 ALDH8A1Q9H2A2 487 aaPredicted RBP21.49■■□□□ 1.03
HSPG2-210ENST00000481644 EHMT1Q9H9B1 1298 aa21.49■■□□□ 1.03
HSPG2-210ENST00000481644 RIC8AQ9NPQ8 531 aa21.49■■□□□ 1.03
HSPG2-210ENST00000481644 PCDHA6Q9UN73 950 aa21.49■■□□□ 1.03
HSPG2-210ENST00000481644 PCDHA8Q9Y5H6 950 aa21.49■■□□□ 1.03
HSPG2-210ENST00000481644 DOCK5Q9H7D0 1870 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms