RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 SHCBP1Q8NEM2 672 aa7.31□□□□□ -1.24
HERC4-210ENST00000480158 DDX27Q96GQ7 796 aaKnown RBP7.31□□□□□ -1.24
HERC4-210ENST00000480158 PXMP2Q9NR77 195 aa7.31□□□□□ -1.24
HERC4-210ENST00000480158 HTTP42858 3142 aa7.31□□□□□ -1.24
HERC4-210ENST00000480158 A0A0G2JMZ2 1700 aa7.31□□□□□ -1.24
HERC4-210ENST00000480158 PFASO15067 1338 aa7.31□□□□□ -1.24
HERC4-210ENST00000480158 BRCA2P51587 3418 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 FAM86B1E9PN63 330 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 PITPNM1O00562 1244 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 SLC37A4O43826 429 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 SORBS3O60504 671 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 FAM86B2P0C5J1 330 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 PTPREP23469 700 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 KRT85P78386 507 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 PDE4DQ08499 809 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 PGM5Q15124 567 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 ANO1Q5XXA6 986 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 FAM177A1Q8N128 213 aaPredicted RBP7.3□□□□□ -1.24
HERC4-210ENST00000480158 RGS22Q8NE09 1264 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 CD99L2Q8TCZ2 262 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 NSUN6Q8TEA1 469 aaKnown RBP7.3□□□□□ -1.24
HERC4-210ENST00000480158 TRIM47Q96LD4 638 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 ZNF396Q96N95 335 aaPredicted RBP7.3□□□□□ -1.24
HERC4-210ENST00000480158 GPR25O00155 361 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 STRNO43815 780 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 MARCH6O60337 910 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 NR3C2P08235 984 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 COPB2P35606 906 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 SREBF1P36956 1147 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 MAP2K1Q02750 393 aaPredicted RBP7.3□□□□□ -1.24
HERC4-210ENST00000480158 PTGDRQ13258 359 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 STK38Q15208 465 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 SPATA32Q96LK8 384 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 PDCD2LQ9BRP1 358 aa7.3□□□□□ -1.24
HERC4-210ENST00000480158 DDX25Q9UHL0 483 aaKnown RBP7.3□□□□□ -1.24
HERC4-210ENST00000480158 PRPF40AO75400 957 aaKnown RBP7.29□□□□□ -1.24
HERC4-210ENST00000480158 ME1P48163 572 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 ALDH5A1P51649 535 aaPredicted RBP7.29□□□□□ -1.24
HERC4-210ENST00000480158 FCGRTP55899 365 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 MRPS9P82933 396 aaKnown RBP7.29□□□□□ -1.24
HERC4-210ENST00000480158 KIF22Q14807 665 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 CCL14Q16627 93 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 SPECC1Q5M775 1068 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 SEPT14Q6ZU15 432 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 FAM133AQ8N9E0 248 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 NPLOC4Q8TAT6 608 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 ZNF296Q8WUU4 475 aaPredicted RBP7.29□□□□□ -1.24
HERC4-210ENST00000480158 WDR11Q9BZH6 1224 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 TMEM60Q9H2L4 133 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 EHMT1Q9H9B1 1298 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 MAP3K20Q9NYL2 800 aaKnown RBP7.29□□□□□ -1.24
HERC4-210ENST00000480158 ADD3Q9UEY8 706 aaKnown RBP7.29□□□□□ -1.24
HERC4-210ENST00000480158 CFAP45Q9UL16 551 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 GABRQQ9UN88 632 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 DNAJC25-GNG10A0A024R161 153 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 NEMFO60524 1076 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 ITGB5P18084 799 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 MLLT3P42568 568 aaPredicted RBP7.29□□□□□ -1.24
HERC4-210ENST00000480158 TXKP42681 527 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 PRKCZQ05513 592 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 GRB14Q14449 540 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 LEO1Q8WVC0 666 aaPredicted RBP7.29□□□□□ -1.24
HERC4-210ENST00000480158 FGD4Q96M96 766 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 GBP4Q96PP9 640 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 NUDT12Q9BQG2 462 aa7.29□□□□□ -1.24
HERC4-210ENST00000480158 VWA3AA6NCI4 1184 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 SLC15A5A6NIM6 579 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 DDX39AO00148 427 aaKnown RBP7.28□□□□□ -1.24
HERC4-210ENST00000480158 SPTLC2O15270 562 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 ARP10275 920 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 CCND2P30279 289 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 TRAPPC10P48553 1259 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 FLT3LGP49771 235 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 USP11P51784 963 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 GHRHRQ02643 423 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 GRIN1Q05586 938 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 STXBP2Q15833 593 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 CALCRLQ16602 461 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 ZNF792Q3KQV3 632 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 CEP55Q53EZ4 464 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 PRAMEF19Q5SWL8 479 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 MORN1Q5T089 497 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 PCNX4Q63HM2 1172 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 MCTP2Q6DN12 878 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 VSIG10LQ86VR7 867 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 PLA2G4DQ86XP0 818 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 LINC00301Q8NCQ3 95 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 CRYGNQ8WXF5 182 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 CLIC6Q96NY7 704 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.28□□□□□ -1.24
HERC4-210ENST00000480158 WBP1LQ9NX94 342 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 RPTORQ8N122 1335 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 GADD45BO75293 160 aaPredicted RBP7.28□□□□□ -1.24
HERC4-210ENST00000480158 PTGS1P23219 599 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 CDC25AP30304 524 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 CYP2C19P33261 490 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 TECP42680 631 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 SP4Q02446 784 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 MAP2K5Q13163 448 aa7.28□□□□□ -1.24
HERC4-210ENST00000480158 MTMR1Q13613 665 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms