RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 CLCN5P51795 746 aa14.31□□□□□ -0.12
USP11-208ENST00000480104 MTMR3Q13615 1198 aa14.31□□□□□ -0.12
USP11-208ENST00000480104 TRIM71Q2Q1W2 868 aaKnown RBP14.31□□□□□ -0.12
USP11-208ENST00000480104 SESTD1Q86VW0 696 aa14.31□□□□□ -0.12
USP11-208ENST00000480104 UBALD2Q8IYN6 164 aa14.31□□□□□ -0.12
USP11-208ENST00000480104 FIBCD1Q8N539 461 aa14.31□□□□□ -0.12
USP11-208ENST00000480104 DCLK2Q8N568 766 aa14.31□□□□□ -0.12
USP11-208ENST00000480104 PPP2R3CQ969Q6 453 aa14.31□□□□□ -0.12
USP11-208ENST00000480104 MEIS3Q99687 375 aa14.31□□□□□ -0.12
USP11-208ENST00000480104 HAUS7Q99871 368 aa14.31□□□□□ -0.12
USP11-208ENST00000480104 IFIH1Q9BYX4 1025 aaKnown RBP14.31□□□□□ -0.12
USP11-208ENST00000480104 MFSD1Q9H3U5 465 aa14.31□□□□□ -0.12
USP11-208ENST00000480104 PRKRIP1Q9H875 184 aaPredicted RBP14.31□□□□□ -0.12
USP11-208ENST00000480104 F5H6K3 240 aa14.3□□□□□ -0.12
USP11-208ENST00000480104 NRIP1P48552 1158 aa14.3□□□□□ -0.12
USP11-208ENST00000480104 KLRC3Q07444 240 aa14.3□□□□□ -0.12
USP11-208ENST00000480104 KIAA0319Q5VV43 1072 aa14.3□□□□□ -0.12
USP11-208ENST00000480104 CWF19L1Q69YN2 538 aaKnown RBP14.3□□□□□ -0.12
USP11-208ENST00000480104 COPS5Q92905 334 aa14.3□□□□□ -0.12
USP11-208ENST00000480104 ZNF512BQ96KM6 892 aaPredicted RBP14.3□□□□□ -0.12
USP11-208ENST00000480104 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.3□□□□□ -0.12
USP11-208ENST00000480104 SH2B1Q9NRF2 756 aaPredicted RBP14.3□□□□□ -0.12
USP11-208ENST00000480104 CYP39A1Q9NYL5 469 aa14.3□□□□□ -0.12
USP11-208ENST00000480104 HDAC5Q9UQL6 1122 aa14.3□□□□□ -0.12
USP11-208ENST00000480104 R4GN57 208 aa14.3□□□□□ -0.12
USP11-208ENST00000480104 MYH8P13535 1937 aa14.3□□□□□ -0.12
USP11-208ENST00000480104 CYP2D7A0A087X1C5 515 aa14.29□□□□□ -0.12
USP11-208ENST00000480104 RBM47A0AV96 593 aaKnown RBP14.29□□□□□ -0.12
USP11-208ENST00000480104 DDX10Q13206 875 aaKnown RBP14.29□□□□□ -0.12
USP11-208ENST00000480104 PPP2R5BQ15173 497 aa14.29□□□□□ -0.12
USP11-208ENST00000480104 TNNI3KQ59H18 835 aa14.29□□□□□ -0.12
USP11-208ENST00000480104 CCDC105Q8IYK2 499 aa14.29□□□□□ -0.12
USP11-208ENST00000480104 SSH1Q8WYL5 1049 aa14.29□□□□□ -0.12
USP11-208ENST00000480104 RUBCNQ92622 972 aa14.29□□□□□ -0.12
USP11-208ENST00000480104 IL17RAQ96F46 866 aa14.29□□□□□ -0.12
USP11-208ENST00000480104 ANTXR1Q9H6X2 564 aa14.29□□□□□ -0.12
USP11-208ENST00000480104 SORCS3Q9UPU3 1222 aa14.29□□□□□ -0.12
USP11-208ENST00000480104 FPGT-TNNI3KV9GXZ4 949 aa14.29□□□□□ -0.12
USP11-208ENST00000480104 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.28□□□□□ -0.12
USP11-208ENST00000480104 DNAJB1P25685 340 aa14.28□□□□□ -0.12
USP11-208ENST00000480104 ATXN1P54253 815 aaKnown RBP14.28□□□□□ -0.12
USP11-208ENST00000480104 PTK7Q13308 1070 aa14.28□□□□□ -0.12
USP11-208ENST00000480104 MTX1Q13505 466 aa14.28□□□□□ -0.12
USP11-208ENST00000480104 PLEKHG4Q58EX7 1191 aa14.28□□□□□ -0.12
USP11-208ENST00000480104 EMSYQ7Z589 1322 aa14.28□□□□□ -0.12
USP11-208ENST00000480104 RBM23Q86U06 439 aaKnown RBP14.28□□□□□ -0.12
USP11-208ENST00000480104 FLCNQ8NFG4 579 aa14.28□□□□□ -0.12
USP11-208ENST00000480104 TRERF1Q96PN7 1200 aa14.28□□□□□ -0.12
USP11-208ENST00000480104 UNC79Q9P2D8 2635 aa14.28□□□□□ -0.12
USP11-208ENST00000480104 GTF2IRD1Q9UHL9 959 aa14.28□□□□□ -0.12
USP11-208ENST00000480104 FEM1BQ9UK73 627 aa14.28□□□□□ -0.12
USP11-208ENST00000480104 RWDD3Q9Y3V2 267 aa14.28□□□□□ -0.12
USP11-208ENST00000480104 PI15O43692 258 aa14.27□□□□□ -0.13
USP11-208ENST00000480104 ADRB1P08588 477 aa14.27□□□□□ -0.13
USP11-208ENST00000480104 ALAS1P13196 640 aa14.27□□□□□ -0.13
USP11-208ENST00000480104 RBM10P98175 930 aaKnown RBP14.27□□□□□ -0.13
USP11-208ENST00000480104 G3BP1Q13283 466 aaKnown RBP eCLIP14.27□□□□□ -0.133e-6■■■□□ 15.5
USP11-208ENST00000480104 MUM1L1Q5H9M0 696 aa14.27□□□□□ -0.13
USP11-208ENST00000480104 C16orf86Q6ZW13 317 aa14.27□□□□□ -0.13
USP11-208ENST00000480104 LCORLQ8N3X6 602 aa14.27□□□□□ -0.13
USP11-208ENST00000480104 DTWD2Q8NBA8 298 aa14.27□□□□□ -0.13
USP11-208ENST00000480104 KAT2BQ92831 832 aa14.27□□□□□ -0.13
USP11-208ENST00000480104 HDAC6Q9UBN7 1215 aa14.27□□□□□ -0.13
USP11-208ENST00000480104 ADGRA3Q8IWK6 1321 aa14.26□□□□□ -0.13
USP11-208ENST00000480104 LCTP09848 1927 aa14.26□□□□□ -0.13
USP11-208ENST00000480104 NKRFO15226 690 aaKnown RBP eCLIP14.26□□□□□ -0.13
USP11-208ENST00000480104 ALDH5A1P51649 535 aaPredicted RBP14.26□□□□□ -0.13
USP11-208ENST00000480104 TKFCQ3LXA3 575 aa14.26□□□□□ -0.13
USP11-208ENST00000480104 TMED8Q6PL24 325 aaPredicted RBP14.26□□□□□ -0.13
USP11-208ENST00000480104 NSMFQ6X4W1 530 aa14.26□□□□□ -0.13
USP11-208ENST00000480104 LRRC47Q8N1G4 583 aaKnown RBP14.26□□□□□ -0.13
USP11-208ENST00000480104 CLP1Q92989 425 aaKnown RBP14.26□□□□□ -0.13
USP11-208ENST00000480104 GPR108Q9NPR9 543 aa14.26□□□□□ -0.13
USP11-208ENST00000480104 TSHZ2Q9NRE2 1034 aa14.26□□□□□ -0.13
USP11-208ENST00000480104 TLR7Q9NYK1 1049 aaKnown RBP14.26□□□□□ -0.13
USP11-208ENST00000480104 PLAGL2Q9UPG8 496 aa14.26□□□□□ -0.13
USP11-208ENST00000480104 AOC1P19801 751 aa14.25□□□□□ -0.13
USP11-208ENST00000480104 PDE4BQ07343 736 aa14.25□□□□□ -0.13
USP11-208ENST00000480104 VN1R2Q8NFZ6 395 aa14.25□□□□□ -0.13
USP11-208ENST00000480104 DBNLQ9UJU6 430 aaKnown RBP14.25□□□□□ -0.13
USP11-208ENST00000480104 DCDC2BA2VCK2 349 aa14.24□□□□□ -0.13
USP11-208ENST00000480104 RSPH10B2B2RC85 870 aa14.24□□□□□ -0.13
USP11-208ENST00000480104 PRKAB2O43741 272 aa14.24□□□□□ -0.13
USP11-208ENST00000480104 MMP3P08254 477 aa14.24□□□□□ -0.13
USP11-208ENST00000480104 RSPH10BP0C881 870 aa14.24□□□□□ -0.13
USP11-208ENST00000480104 ZNF200P98182 395 aaPredicted RBP14.24□□□□□ -0.13
USP11-208ENST00000480104 C12orf60Q5U649 245 aa14.24□□□□□ -0.13
USP11-208ENST00000480104 C7orf31Q8N865 590 aa14.24□□□□□ -0.13
USP11-208ENST00000480104 SCFD2Q8WU76 684 aa14.24□□□□□ -0.13
USP11-208ENST00000480104 AFG1LQ8WV93 481 aa14.24□□□□□ -0.13
USP11-208ENST00000480104 SEPT8Q92599 483 aa14.24□□□□□ -0.13
USP11-208ENST00000480104 NYAP2Q9P242 653 aa14.24□□□□□ -0.13
USP11-208ENST00000480104 ITGB1P05556 798 aa14.23□□□□□ -0.13
USP11-208ENST00000480104 PDE6AP16499 860 aa14.23□□□□□ -0.13
USP11-208ENST00000480104 SDHBP21912 280 aa14.23□□□□□ -0.13
USP11-208ENST00000480104 THPOP40225 353 aa14.23□□□□□ -0.13
USP11-208ENST00000480104 COL9A3Q14050 684 aaPredicted RBP14.23□□□□□ -0.13
USP11-208ENST00000480104 CCDC184Q52MB2 194 aa14.23□□□□□ -0.13
USP11-208ENST00000480104 PLVAPQ9BX97 442 aa14.23□□□□□ -0.13
USP11-208ENST00000480104 OSBPL7Q9BZF2 842 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms