RNA–Protein interactions for RNA: ENST00000480057.1

VTI1A-204, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-204ENST00000480057 ADM5C9JUS6 153 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 CDC25AP30304 524 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 HOXA13P31271 388 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-204ENST00000480057 PPATQ06203 517 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 GRB10Q13322 594 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 VGLL4Q14135 290 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 ZNF658Q5TYW1 1059 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-204ENST00000480057 CATSPERGQ6ZRH7 1159 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 ILDR2Q71H61 639 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 PNMA8AQ86V59 439 aaPredicted RBP12.38□□□□□ -0.43
VTI1A-204ENST00000480057 REPS2Q8NFH8 660 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 SNX29Q8TEQ0 813 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 CDK5RAP3Q96JB5 506 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 AGBL1Q96MI9 1066 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 PNMA5Q96PV4 448 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 TRIM5Q9C035 493 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 HOXC10Q9NYD6 342 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 LOC285556D6RIA3 1793 aa12.38□□□□□ -0.43
VTI1A-204ENST00000480057 IGLV3-22A0A075B6J6 115 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 FAM86B1E9PN63 330 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 CXCL11O14625 94 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 RHOBTB3O94955 611 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 RPN1P04843 607 aaKnown RBP12.37□□□□□ -0.43
VTI1A-204ENST00000480057 FAM86B2P0C5J1 330 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 BCRP11274 1271 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 MUTP22033 750 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 ZNF76P36508 570 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 HMGCS2P54868 508 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 PLCB2Q00722 1185 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 CUL4BQ13620 913 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 DHX8Q14562 1220 aaKnown RBP12.37□□□□□ -0.43
VTI1A-204ENST00000480057 COBLL1Q53SF7 1204 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 PRR16Q569H4 304 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 XRRA1Q6P2D8 792 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 SV2BQ7L1I2 683 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 FCHSD1Q86WN1 690 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 ANKRD13AQ8IZ07 590 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 ERMNQ8TAM6 284 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 CDCA5Q96FF9 252 aa12.37□□□□□ -0.43
VTI1A-204ENST00000480057 TAF1DQ9H5J8 278 aaPredicted RBP12.37□□□□□ -0.43
VTI1A-204ENST00000480057 PVALEFA0A1B0GWK0 134 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 POTEMA6NI47 508 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 SPDYE5A6NIY4 337 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 MEIS1O00470 390 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 MSH4O15457 936 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 CBFA2T2O43439 604 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 PTMAP06454 111 aaKnown RBP12.36□□□□□ -0.43
VTI1A-204ENST00000480057 SPIRE1Q08AE8 756 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 CEP55Q53EZ4 464 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 ISM2Q6H9L7 571 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 ZSCAN30Q86W11 494 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 ERO1BQ86YB8 467 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 PROCA1Q8NCQ7 364 aaPredicted RBP12.36□□□□□ -0.43
VTI1A-204ENST00000480057 TBC1D5Q92609 795 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 LARP4BQ92615 738 aaKnown RBP12.36□□□□□ -0.43
VTI1A-204ENST00000480057 RAD54LQ92698 747 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 SLC5A5Q92911 643 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 ATG4CQ96DT6 458 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 TRIM9Q9C026 710 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 RAVER2Q9HCJ3 691 aaKnown RBP12.36□□□□□ -0.43
VTI1A-204ENST00000480057 BLOC1S4Q9NUP1 217 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 PTPRFP10586 1907 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 A0A0G2JMZ2 1700 aa12.36□□□□□ -0.43
VTI1A-204ENST00000480057 SMCHD1A6NHR9 2005 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 PPP1R3GB7ZBB8 358 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 KLRC4O43908 158 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 ALAS1P13196 640 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 TAL1P17542 331 aaPredicted RBP12.35□□□□□ -0.43
VTI1A-204ENST00000480057 CCT6AP40227 531 aaKnown RBP12.35□□□□□ -0.43
VTI1A-204ENST00000480057 PPIL2Q13356 520 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 PPP2R5CQ13362 524 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 DGKZQ13574 1117 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 SPATA1Q5VX52 437 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 PCNX4Q63HM2 1172 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 ARMC9Q7Z3E5 817 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 CPXCR1Q8N123 301 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 MB21D1Q8N884 522 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 SYTL5Q8TDW5 730 aaPredicted RBP12.35□□□□□ -0.43
VTI1A-204ENST00000480057 TRERF1Q96PN7 1200 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 RIT2Q99578 217 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 MXRA8Q9BRK3 442 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 POLR3CQ9BUI4 534 aaPredicted RBP12.35□□□□□ -0.43
VTI1A-204ENST00000480057 TEX13BQ9BXU2 312 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 WDR11Q9BZH6 1224 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 HSD3B7Q9H2F3 369 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 BLZF1Q9H2G9 400 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 RWDD2AQ9UIY3 292 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 VAV3Q9UKW4 847 aa12.35□□□□□ -0.43
VTI1A-204ENST00000480057 ZNF214Q9UL59 606 aaPredicted RBP12.35□□□□□ -0.43
VTI1A-204ENST00000480057 A0A0G2JLL6 359 aaPredicted RBP12.34□□□□□ -0.43
VTI1A-204ENST00000480057 NFIBO00712 420 aa12.34□□□□□ -0.43
VTI1A-204ENST00000480057 ZNF18P17022 549 aa12.34□□□□□ -0.43
VTI1A-204ENST00000480057 RPA1P27694 616 aa12.34□□□□□ -0.43
VTI1A-204ENST00000480057 STIM1Q13586 685 aa12.34□□□□□ -0.43
VTI1A-204ENST00000480057 KMT5BQ4FZB7 885 aa12.34□□□□□ -0.43
VTI1A-204ENST00000480057 SAMD1Q6SPF0 538 aaPredicted RBP12.34□□□□□ -0.43
VTI1A-204ENST00000480057 LBX2Q6XYB7 198 aa12.34□□□□□ -0.43
VTI1A-204ENST00000480057 RNF207Q6ZRF8 634 aa12.34□□□□□ -0.43
VTI1A-204ENST00000480057 UNC13DQ70J99 1090 aa12.34□□□□□ -0.43
VTI1A-204ENST00000480057 PRRT2Q7Z6L0 340 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms