RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 SRGAP2BP0DMP2 458 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 GCFC2P16383 781 aaKnown RBP6.62□□□□□ -1.35
CPS1-207ENST00000479988 ELF1P32519 619 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 PPP1R2P41236 205 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 MAEAQ7L5Y9 396 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 NEK8Q86SG6 692 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 IQUBQ8NA54 791 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 SPATA33Q96N06 139 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 NACC1Q96RE7 527 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 NT5C3AQ9H0P0 336 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 DEF6Q9H4E7 631 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 VPS54Q9P1Q0 977 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 AGTPBP1Q9UPW5 1226 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 LRRIQ4A6NIV6 560 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 INO80B-WBP1J3KQ70 363 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 TNNT1P13805 278 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 GRK4P32298 578 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 USP8P40818 1118 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 UBASH3AP57075 661 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 TNFAIP2Q03169 654 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 TRPC3Q13507 836 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 SPRYD7Q5W111 196 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 KLHL10Q6JEL2 608 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 CTR9Q6PD62 1173 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 SARM1Q6SZW1 724 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 VPS36Q86VN1 386 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 SYNCQ9H7C4 482 aa6.62□□□□□ -1.35
CPS1-207ENST00000479988 HSPA1AP0DMV8 641 aaKnown RBP6.61□□□□□ -1.35
CPS1-207ENST00000479988 HSPA1BP0DMV9 641 aaKnown RBP6.61□□□□□ -1.35
CPS1-207ENST00000479988 BIRC3Q13489 604 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 ZNF174Q15697 407 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 TTC38Q5R3I4 469 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 MICALL1Q8N3F8 863 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 TXLNBQ8N3L3 684 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 PHKBQ93100 1093 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 IKBKBO14920 756 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 SKILP12757 684 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 ERCC3P19447 782 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 RPL13P26373 211 aaKnown RBP6.61□□□□□ -1.35
CPS1-207ENST00000479988 CETN2P41208 172 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 AP3B2Q13367 1082 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 SBK1Q52WX2 424 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 NOM1Q5C9Z4 860 aaKnown RBP6.61□□□□□ -1.35
CPS1-207ENST00000479988 SV2BQ7L1I2 683 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 SLAIN1Q8ND83 568 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 MNS1Q8NEH6 495 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 GPKOWQ92917 476 aaPredicted RBP eCLIP6.61□□□□□ -1.35
CPS1-207ENST00000479988 PGBD1Q96JS3 809 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 IDI2Q9BXS1 227 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 KDM3AQ9Y4C1 1321 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 RGPD2P0DJD1 1756 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 GSG1L2A8MUP6 293 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 BIN1O00499 593 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 GNRH1P01148 92 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 PFKFB1P16118 471 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 MARK3P27448 753 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 PTGER2P43116 358 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 MTMR1Q13613 665 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 MOB2Q70IA6 237 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.61□□□□□ -1.35
CPS1-207ENST00000479988 EHD4Q9H223 541 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 MTMR4Q9NYA4 1195 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 LARSQ9P2J5 1176 aaKnown RBP6.61□□□□□ -1.35
CPS1-207ENST00000479988 DDX25Q9UHL0 483 aaKnown RBP6.61□□□□□ -1.35
CPS1-207ENST00000479988 PDS5AQ29RF7 1337 aaKnown RBP6.61□□□□□ -1.35
CPS1-207ENST00000479988 N4BP2Q86UW6 1770 aaPredicted RBP6.61□□□□□ -1.35
CPS1-207ENST00000479988 IRF6O14896 467 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 KPNA6O60684 536 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 ATF7P17544 494 aaPredicted RBP6.61□□□□□ -1.35
CPS1-207ENST00000479988 HOXA13P31271 388 aaPredicted RBP6.61□□□□□ -1.35
CPS1-207ENST00000479988 FAM102BQ5T8I3 360 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 CATSPER4Q7RTX7 472 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 TMC6Q7Z403 805 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 FAM114A1Q8IWE2 563 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 RTFDC1Q9BY42 306 aaPredicted RBP6.61□□□□□ -1.35
CPS1-207ENST00000479988 ASCC2Q9H1I8 757 aaPredicted RBP6.61□□□□□ -1.35
CPS1-207ENST00000479988 KCNQ5Q9NR82 932 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 TMEM39AQ9NV64 488 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.61□□□□□ -1.35
CPS1-207ENST00000479988 SALL1Q9NSC2 1324 aa6.61□□□□□ -1.35
CPS1-207ENST00000479988 PRPF3O43395 683 aaKnown RBP6.6□□□□□ -1.35
CPS1-207ENST00000479988 ORC4O43929 436 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 CYP2C8P10632 490 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 AKR1A1P14550 325 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 SSR1P43307 286 aaKnown RBP6.6□□□□□ -1.35
CPS1-207ENST00000479988 SNAP25P60880 206 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 BAATQ14032 418 aaPredicted RBP6.6□□□□□ -1.35
CPS1-207ENST00000479988 CCDC181Q5TID7 509 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 ZNF579Q8NAF0 562 aaKnown RBP6.6□□□□□ -1.35
CPS1-207ENST00000479988 MSANTD4Q8NCY6 345 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 URGCPQ8TCY9 931 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 GOLGA1Q92805 767 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 BPIFA3Q9BQP9 254 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 APOL6Q9BWW8 343 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 VWA3AA6NCI4 1184 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 SPDYE5A6NIY4 337 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 FARP2O94887 1054 aaPredicted RBP6.6□□□□□ -1.35
CPS1-207ENST00000479988 MMP1P03956 469 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 PTGS1P23219 599 aa6.6□□□□□ -1.35
CPS1-207ENST00000479988 RBM43Q6ZSC3 357 aaKnown RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms