RNA–Protein interactions for RNA: ENST00000479397.2

CNOT10-215, Transcript of CCR4-NOT transcription complex subunit 10, humanhuman

TSL 5

Gene CNOT10, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT10-215ENST00000479397 PKD1L2Q7Z442 2459 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 ZFHX4Q86UP3 3567 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 MED19A0JLT2 244 aaPredicted RBP6.53□□□□□ -1.36
CNOT10-215ENST00000479397 HRO43593 1189 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 CXCL10P02778 98 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 AMHP03971 560 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 GNAI3P08754 354 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 FDX1P10109 184 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 HTRA4P83105 476 aaPredicted RBP6.53□□□□□ -1.36
CNOT10-215ENST00000479397 PTGISQ16647 500 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 CTC1Q2NKJ3 1217 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 DUSP28Q4G0W2 176 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 TNNI3KQ59H18 835 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 TAPT1Q6NXT6 567 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 FAM117BQ6P1L5 589 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 KIAA1211Q6ZU35 1233 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 EEPD1Q7L9B9 569 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 FBXO16Q8IX29 292 aaPredicted RBP6.53□□□□□ -1.36
CNOT10-215ENST00000479397 SSH1Q8WYL5 1049 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 ASIC4Q96FT7 647 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 RIOK1Q9BRS2 568 aaKnown RBP6.53□□□□□ -1.36
CNOT10-215ENST00000479397 SLC38A10Q9HBR0 1119 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 RAVER2Q9HCJ3 691 aaKnown RBP6.53□□□□□ -1.36
CNOT10-215ENST00000479397 PDGFCQ9NRA1 345 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 HOMER2Q9NSB8 354 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 PCDHGA10Q9Y5H3 936 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 FPGT-TNNI3KV9GXZ4 949 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 CHD8Q9HCK8 2581 aa6.53□□□□□ -1.36
CNOT10-215ENST00000479397 LOC730098B7Z3J9 87 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 CBX2Q14781 532 aaPredicted RBP6.52□□□□□ -1.37
CNOT10-215ENST00000479397 ALDH1L2Q3SY69 923 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 FBXO11Q86XK2 927 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 TMEM192Q8IY95 271 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 MYOCDQ8IZQ8 938 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 OR6J1Q8NGC5 347 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 PPP2R3CQ969Q6 453 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 KIFC2Q96AC6 838 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 DYNLL2Q96FJ2 89 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 DDRGK1Q96HY6 314 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 CNTNAP3BQ96NU0 1288 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 YME1L1Q96TA2 773 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 NUP88Q99567 741 aaPredicted RBP6.52□□□□□ -1.37
CNOT10-215ENST00000479397 MEIS3Q99687 375 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 DBNDD2Q9BQY9 259 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 CNTNAP3Q9BZ76 1288 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 WDR11Q9BZH6 1224 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 LMAN2LQ9H0V9 348 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 DCP1AQ9NPI6 582 aaPredicted RBP6.52□□□□□ -1.37
CNOT10-215ENST00000479397 A1CFQ9NQ94 594 aaKnown RBP6.52□□□□□ -1.37
CNOT10-215ENST00000479397 FEM1BQ9UK73 627 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 FAM208BQ5VWN6 2430 aa6.52□□□□□ -1.37
CNOT10-215ENST00000479397 EMSYQ7Z589 1322 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 TTC3P53804 2025 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 LOC102724159A0A0B4J2E5 919 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 F5H6K3 240 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 NKRFO15226 690 aaKnown RBP eCLIP6.51□□□□□ -1.37
CNOT10-215ENST00000479397 NBNO60934 754 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 TBX10O75333 385 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 EYA4O95677 639 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 CKBP12277 381 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 PTGS1P23219 599 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 CDK8P49336 464 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 NDUFV1P49821 464 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 KLRC3Q07444 240 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 DLX2Q07687 328 aaPredicted RBP6.51□□□□□ -1.37
CNOT10-215ENST00000479397 RBL2Q08999 1139 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 HYAL1Q12794 435 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 OS9Q13438 667 aaPredicted RBP6.51□□□□□ -1.37
CNOT10-215ENST00000479397 PUM1Q14671 1186 aaKnown RBP eCLIP6.51□□□□□ -1.37
CNOT10-215ENST00000479397 PWP2Q15269 919 aaKnown RBP6.51□□□□□ -1.37
CNOT10-215ENST00000479397 TTF1Q15361 905 aaPredicted RBP6.51□□□□□ -1.37
CNOT10-215ENST00000479397 TKFCQ3LXA3 575 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 SDR42E1Q8WUS8 393 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 RIPOR3Q96MK2 946 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 API5Q9BZZ5 524 aaKnown RBP6.51□□□□□ -1.37
CNOT10-215ENST00000479397 SMC4Q9NTJ3 1288 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 RNF146Q9NTX7 359 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 ADD3Q9UEY8 706 aaKnown RBP6.51□□□□□ -1.37
CNOT10-215ENST00000479397 VPS9D1Q9Y2B5 631 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 RWDD3Q9Y3V2 267 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 SPTBN2O15020 2390 aa6.51□□□□□ -1.37
CNOT10-215ENST00000479397 ANKRD11Q6UB99 2663 aaPredicted RBP6.51□□□□□ -1.37
CNOT10-215ENST00000479397 RALGAPA1Q6GYQ0 2036 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 USP24Q9UPU5 2620 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 LGR5O75473 907 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 NDUFB10O96000 172 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 RB1P06400 928 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 CYP2D6P10635 497 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 ICAM3P32942 547 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 CTNNB1P35222 781 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 CHMP4BP1P59074 171 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 GPNMBQ14956 572 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 PPP2R5BQ15173 497 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 PTPN21Q16825 1174 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 TMEM63BQ5T3F8 832 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.5□□□□□ -1.37
CNOT10-215ENST00000479397 C16orf86Q6ZW13 317 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 FRMD5Q7Z6J6 570 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 ZBTB33Q86T24 672 aa6.5□□□□□ -1.37
CNOT10-215ENST00000479397 SESTD1Q86VW0 696 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms