RNA–Protein interactions for RNA: ENST00000478932.1

USP25-208, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 1 (best)

Gene USP25, Length 2,605 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-208ENST00000478932 CCZ1P86791 482 aaPredicted RBP4.63□□□□□ -1.67
USP25-208ENST00000478932 MAP3K10Q02779 954 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 PDE4DQ08499 809 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 TNFAIP1Q13829 316 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 TMEM266Q2M3C6 531 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 ANGEL2Q5VTE6 544 aaKnown RBP4.63□□□□□ -1.67
USP25-208ENST00000478932 KRT79Q5XKE5 535 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 MAMSTRQ6ZN01 415 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 APTXQ7Z2E3 356 aaKnown RBP4.63□□□□□ -1.67
USP25-208ENST00000478932 GLIS3Q8NEA6 775 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 CHURC1Q8WUH1 139 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 NELFBQ8WX92 580 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 CRYGNQ8WXF5 182 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 CDK5RAP3Q96JB5 506 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 PNMA5Q96PV4 448 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 RAB34Q9BZG1 259 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 SLC39A2Q9NP94 309 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 SPTLC3Q9NUV7 552 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 KIAA1024Q9UPX6 916 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 ZNF646O15015 1829 aaPredicted RBP4.63□□□□□ -1.67
USP25-208ENST00000478932 SYNRGQ9UMZ2 1314 aa4.63□□□□□ -1.67
USP25-208ENST00000478932 GREB1LQ9C091 1923 aaPredicted RBP4.63□□□□□ -1.67
USP25-208ENST00000478932 H7C1D1 291 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 MEIS1O00470 390 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 NKRFO15226 690 aaKnown RBP eCLIP4.62□□□□□ -1.67
USP25-208ENST00000478932 RHOBTB3O94955 611 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 HIRAP54198 1017 aaPredicted RBP4.62□□□□□ -1.67
USP25-208ENST00000478932 PSMC6P62333 389 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 CYP4A11Q02928 519 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 PAK1Q13153 545 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 MTMR2Q13614 643 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 NR1I3Q14994 352 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 KIF4BQ2VIQ3 1234 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 SPECC1LQ69YQ0 1117 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 SV2BQ7L1I2 683 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 LDHDQ86WU2 507 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 IRF2BP1Q8IU81 584 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 VSTM4Q8IW00 320 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 ADSSL1Q8N142 457 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 TRPM4Q8TD43 1214 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 LARP4BQ92615 738 aaKnown RBP4.62□□□□□ -1.67
USP25-208ENST00000478932 DDX12PQ92771 950 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 LENG9Q96B70 501 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 FHDC1Q9C0D6 1143 aaPredicted RBP4.62□□□□□ -1.67
USP25-208ENST00000478932 VPS16Q9H269 839 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 RMND1Q9NWS8 449 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 IMPACTQ9P2X3 320 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 LAMA2P24043 3122 aaKnown RBP4.62□□□□□ -1.67
USP25-208ENST00000478932 POTEB3A0JP26 581 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 POTEFA5A3E0 1075 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 POTECB2RU33 542 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 E9PMD0 336 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 PES1O00541 588 aaKnown RBP4.62□□□□□ -1.67
USP25-208ENST00000478932 NFIBO00712 420 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 N4BP3O15049 544 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 ZBTB39O15060 712 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 FLOT1O75955 427 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 DDNO94850 711 aaPredicted RBP4.62□□□□□ -1.67
USP25-208ENST00000478932 GCFC2P16383 781 aaKnown RBP4.62□□□□□ -1.67
USP25-208ENST00000478932 RPS12P25398 132 aaKnown RBP4.62□□□□□ -1.67
USP25-208ENST00000478932 ZNF76P36508 570 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 SREBF1P36956 1147 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 NUBP1P53384 320 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 GSDMDP57764 484 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 AMPD3Q01432 767 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 LRRC41Q15345 812 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 CDKAL1Q5VV42 579 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 CEP135Q66GS9 1140 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 POTEBQ6S5H4 581 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 POTEEQ6S8J3 1075 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.62□□□□□ -1.67
USP25-208ENST00000478932 CATSPER3Q86XQ3 398 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 PRPF38AQ8NAV1 312 aaKnown RBP4.62□□□□□ -1.67
USP25-208ENST00000478932 GIMAP8Q8ND71 665 aaPredicted RBP4.62□□□□□ -1.67
USP25-208ENST00000478932 ETNPPLQ8TBG4 499 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 WRNIP1Q96S55 665 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 SRRTQ9BXP5 876 aaKnown RBP4.62□□□□□ -1.67
USP25-208ENST00000478932 TANGO6Q9C0B7 1094 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 GLT8D2Q9H1C3 349 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 KCNMB3Q9NPA1 279 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 RGL1Q9NZL6 768 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 TBC1D7Q9P0N9 293 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 ADD3Q9UEY8 706 aaKnown RBP4.62□□□□□ -1.67
USP25-208ENST00000478932 RWDD2AQ9UIY3 292 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 ZHX2Q9Y6X8 837 aa4.62□□□□□ -1.67
USP25-208ENST00000478932 CYP3A7-CYP3A51PA0A087WV96 503 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 NPHP3-ACAD11A0A0J9YXS1 232 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 A0A1B0GTH6 734 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 LRRC10BA6NIK2 292 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 GCOM1H8Y6P7 765 aaPredicted RBP4.61□□□□□ -1.67
USP25-208ENST00000478932 PSMA7O14818 248 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 MSH4O15457 936 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 CBFA2T2O43439 604 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 CTNND1O60716 968 aaKnown RBP4.61□□□□□ -1.67
USP25-208ENST00000478932 MED24O75448 989 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 FOSP01100 380 aaPredicted RBP4.61□□□□□ -1.67
USP25-208ENST00000478932 POLR2MP0CAP2 368 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 CYP3A7P24462 503 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 SPIRE1Q08AE8 756 aa4.61□□□□□ -1.67
USP25-208ENST00000478932 AP3B2Q13367 1082 aa4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms