RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 LINC01599Q8WXQ3 324 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 KCTD13Q8WZ19 329 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 COPS5Q92905 334 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 HHIPL1Q96JK4 782 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 PTCHD1Q96NR3 888 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 CDC6Q99741 560 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 C19orf73Q9NVV2 129 aa7.38□□□□□ -1.23
CCDC171-207ENST00000478913 FITM1A5D6W6 292 aa7.37□□□□□ -1.23
CCDC171-207ENST00000478913 PRODHO43272 600 aa7.37□□□□□ -1.23
CCDC171-207ENST00000478913 TBC1D8O95759 1140 aa7.37□□□□□ -1.23
CCDC171-207ENST00000478913 THBDP07204 575 aa7.37□□□□□ -1.23
CCDC171-207ENST00000478913 FAM153BP0C7A2 387 aa7.37□□□□□ -1.23
CCDC171-207ENST00000478913 FGFR1P11362 822 aa7.37□□□□□ -1.23
CCDC171-207ENST00000478913 RAC2P15153 192 aa7.37□□□□□ -1.23
CCDC171-207ENST00000478913 KIR2DL1P43626 348 aaPredicted RBP7.37□□□□□ -1.23
CCDC171-207ENST00000478913 KIR2DL2P43627 348 aaPredicted RBP7.37□□□□□ -1.23
CCDC171-207ENST00000478913 SF1Q15637 639 aaKnown RBP7.37□□□□□ -1.23
CCDC171-207ENST00000478913 PRSS53Q2L4Q9 553 aa7.37□□□□□ -1.23
CCDC171-207ENST00000478913 CEP128Q6ZU80 1094 aa7.37□□□□□ -1.23
CCDC171-207ENST00000478913 SPPL2CQ8IUH8 684 aa7.37□□□□□ -1.23
CCDC171-207ENST00000478913 IPO9Q96P70 1041 aaKnown RBP7.37□□□□□ -1.23
CCDC171-207ENST00000478913 GPRC5CQ9NQ84 441 aa7.37□□□□□ -1.23
CCDC171-207ENST00000478913 EBF1Q9UH73 591 aa7.37□□□□□ -1.23
CCDC171-207ENST00000478913 CTNND2Q9UQB3 1225 aa7.37□□□□□ -1.23
CCDC171-207ENST00000478913 UNC13BO14795 1591 aa7.37□□□□□ -1.23
CCDC171-207ENST00000478913 TRBV23OR9-2A0A075B6M9 112 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 CAPNS1P04632 268 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 SCG5P05408 212 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 PABPC1P11940 636 aaKnown RBP7.36□□□□□ -1.23
CCDC171-207ENST00000478913 KCNA6P17658 529 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 PAMP19021 973 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 LAPTM5Q13571 262 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 SLC14A2Q15849 920 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 LONRF2Q1L5Z9 754 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 LCE4AQ5TA78 99 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 YOD1Q5VVQ6 348 aaPredicted RBP7.36□□□□□ -1.23
CCDC171-207ENST00000478913 HLA-DQA1Q5Y7H0 255 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 NSMFQ6X4W1 530 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 JAMLQ86YT9 394 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 TMEM145Q8NBT3 493 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 ZSWIM2Q8NEG5 633 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 CLEC1BQ9P126 229 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 MAP3K1Q13233 1512 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 FAM135AQ9P2D6 1515 aa7.36□□□□□ -1.23
CCDC171-207ENST00000478913 NPHP3-ACAD11A0A0J9YXS1 232 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 FADS2P1A8MWK0 482 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 HPXP02790 462 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 PLS3P13797 630 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 HNRNPMP52272 730 aaKnown RBP eCLIP7.35□□□□□ -1.23
CCDC171-207ENST00000478913 RTP1P59025 263 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 CYP4F3Q08477 520 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 MAP4K2Q12851 820 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 ZC3H12BQ5HYM0 836 aaKnown RBP7.35□□□□□ -1.23
CCDC171-207ENST00000478913 CBLL1Q75N03 491 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 BRINP3Q76B58 766 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 TMEM52Q8NDY8 209 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 FLAD1Q8NFF5 587 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 SH3TC2Q8TF17 1288 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 FRS2Q8WU20 508 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 DDX17Q92841 729 aaKnown RBP7.35□□□□□ -1.23
CCDC171-207ENST00000478913 SLC26A8Q96RN1 970 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 KRTAP17-1Q9BYP8 105 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 KRTAP4-11Q9BYQ6 195 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 ADGRE2Q9UHX3 823 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 PTCH2Q9Y6C5 1203 aa7.35□□□□□ -1.23
CCDC171-207ENST00000478913 DEPDC5O75140 1603 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 PNPLA6Q8IY17 1366 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 DIP2AQ14689 1571 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 DIP2CQ9Y2E4 1556 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 TRBV23-1A0A0A0MS06 115 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 A0A1W2PQ45 241 aaPredicted RBP7.34□□□□□ -1.23
CCDC171-207ENST00000478913 A0A1W2PQY0 241 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 MEFVO15553 781 aaPredicted RBP7.34□□□□□ -1.23
CCDC171-207ENST00000478913 DLX3O60479 287 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 TAL1P17542 331 aaPredicted RBP7.34□□□□□ -1.23
CCDC171-207ENST00000478913 AFMP43652 599 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 ERVFC1P60507 584 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 NR0B2Q15466 257 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 PPIL6Q8IXY8 311 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 LILRA2Q8N149 483 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 SLC17A8Q8NDX2 589 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 NPLOC4Q8TAT6 608 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 MYLIPQ8WY64 445 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 OSBP2Q969R2 916 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 C1orf159Q96HA4 380 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 TAF6LQ9Y6J9 622 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 A2MP01023 1474 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 ARHGAP23Q9P227 1491 aa7.34□□□□□ -1.23
CCDC171-207ENST00000478913 CFAP74Q9C0B2 1584 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 MROH2AA6NES4 1674 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 CAMSAP2Q08AD1 1489 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 BIN1O00499 593 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 HSF5Q4G112 596 aaPredicted RBP7.33□□□□□ -1.24
CCDC171-207ENST00000478913 TMEM67Q5HYA8 995 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 FAM209AQ5JX71 171 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 SLC35F1Q5T1Q4 408 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 ACBD5Q5T8D3 534 aaPredicted RBP7.33□□□□□ -1.24
CCDC171-207ENST00000478913 FOXB2Q5VYV0 432 aa7.33□□□□□ -1.24
CCDC171-207ENST00000478913 E4F1Q66K89 784 aaPredicted RBP7.33□□□□□ -1.24
CCDC171-207ENST00000478913 ATG4DQ86TL0 474 aaPredicted RBP7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms