RNA–Protein interactions for RNA: ENST00000478169.5

CCM2-210, Transcript of CCM2 scaffold protein, humanhuman

TSL 4

Gene CCM2, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-210ENST00000478169 EFCAB14O75071 495 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 CXCL10P02778 98 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 CHMP4BP1P59074 171 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 HAND2P61296 217 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 WDR5P61964 334 aaKnown RBP11.3□□□□□ -0.6
CCM2-210ENST00000478169 ARHGAP1Q07960 439 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 GPNMBQ14956 572 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 STXBP2Q15833 593 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 DGKDQ16760 1214 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 LY6KQ17RY6 165 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 GDF6Q6KF10 455 aaPredicted RBP11.3□□□□□ -0.6
CCM2-210ENST00000478169 CNKSR3Q6P9H4 555 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 SEPT14Q6ZU15 432 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 LRRC8DQ7L1W4 858 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 MCF2L2Q86YR7 1114 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 SYTL5Q8TDW5 730 aaPredicted RBP11.3□□□□□ -0.6
CCM2-210ENST00000478169 KAT2BQ92831 832 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 EMID1Q96A84 441 aaPredicted RBP11.3□□□□□ -0.6
CCM2-210ENST00000478169 ZBED2Q9BTP6 218 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 GTF2IRD1Q9UHL9 959 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 CCDC171Q6TFL3 1326 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 LAMA4Q16363 1823 aa11.3□□□□□ -0.6
CCM2-210ENST00000478169 GOLGA8HP0CJ92 632 aa11.29□□□□□ -0.6
CCM2-210ENST00000478169 CKBP12277 381 aa11.29□□□□□ -0.6
CCM2-210ENST00000478169 MFAP1P55081 439 aaKnown RBP11.29□□□□□ -0.6
CCM2-210ENST00000478169 NMIQ13287 307 aaPredicted RBP11.29□□□□□ -0.6
CCM2-210ENST00000478169 CDC37Q16543 378 aaPredicted RBP11.29□□□□□ -0.6
CCM2-210ENST00000478169 ZNF589Q86UQ0 364 aaPredicted RBP11.29□□□□□ -0.6
CCM2-210ENST00000478169 TBC1D5Q92609 795 aa11.29□□□□□ -0.6
CCM2-210ENST00000478169 DHX38Q92620 1227 aaKnown RBP11.29□□□□□ -0.6
CCM2-210ENST00000478169 ANKS1AQ92625 1134 aa11.29□□□□□ -0.6
CCM2-210ENST00000478169 TAAR1Q96RJ0 339 aa11.29□□□□□ -0.6
CCM2-210ENST00000478169 RMDN3Q96TC7 470 aa11.29□□□□□ -0.6
CCM2-210ENST00000478169 RAD9AQ99638 391 aa11.29□□□□□ -0.6
CCM2-210ENST00000478169 KATNAL1Q9BW62 490 aa11.29□□□□□ -0.6
CCM2-210ENST00000478169 UBA5Q9GZZ9 404 aa11.29□□□□□ -0.6
CCM2-210ENST00000478169 DDX41Q9UJV9 622 aaKnown RBP11.29□□□□□ -0.6
CCM2-210ENST00000478169 KAT6AQ92794 2004 aa11.29□□□□□ -0.6
CCM2-210ENST00000478169 LCHNA4D1U4 455 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 ZNF213O14771 459 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 NBNO60934 754 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 EIF3JO75822 258 aaKnown RBP11.28□□□□□ -0.6
CCM2-210ENST00000478169 GJB5O95377 273 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 ERVK-21P61565 698 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 PTK7Q13308 1070 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 LAMC2Q13753 1193 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 IKBKEQ14164 716 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 ASPRV1Q53RT3 343 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 CHST3Q7LGC8 479 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 IQCA1Q86XH1 822 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 TBC1D10CQ8IV04 446 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 ADGRF4Q8IZF3 695 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 C7orf31Q8N865 590 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 PNMA1Q8ND90 353 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 PPTC7Q8NI37 304 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 TGS1Q96RS0 853 aaKnown RBP11.28□□□□□ -0.6
CCM2-210ENST00000478169 LRFN3Q9BTN0 628 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 CPVLQ9H3G5 476 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 EPHX3Q9H6B9 360 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 COL20A1Q9P218 1284 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 HDAC6Q9UBN7 1215 aa11.28□□□□□ -0.6
CCM2-210ENST00000478169 MRPL11Q9Y3B7 192 aaKnown RBP11.28□□□□□ -0.6
CCM2-210ENST00000478169 HAS3O00219 553 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 GPR37L1O60883 481 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 F2P00734 622 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 NR3C2P08235 984 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 PSEN2P49810 448 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 DEFB103AP81534 67 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 HDAC1Q13547 482 aaPredicted RBP11.27□□□□□ -0.61
CCM2-210ENST00000478169 MFSD10Q14728 455 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 QRICH1Q2TAL8 776 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 TMEM31Q5JXX7 168 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 ARHGEF16Q5VV41 709 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 KCNV1Q6PIU1 500 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 SPRED2Q7Z698 418 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 GDPD5Q8WTR4 605 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 ZKSCAN3Q9BRR0 538 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 KAT14Q9H8E8 782 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 SUGCTQ9HAC7 445 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 MAP3K20Q9NYL2 800 aaKnown RBP11.27□□□□□ -0.61
CCM2-210ENST00000478169 HCN4Q9Y3Q4 1203 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 MRVI1Q9Y6F6 885 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 NEDD4P46934 1319 aa11.27□□□□□ -0.61
CCM2-210ENST00000478169 BAZ2BQ9UIF8 2168 aaKnown RBP11.27□□□□□ -0.61
CCM2-210ENST00000478169 NLRC5Q86WI3 1866 aa11.26□□□□□ -0.61
CCM2-210ENST00000478169 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.26□□□□□ -0.61
CCM2-210ENST00000478169 LINC01553A4QN01 128 aa11.26□□□□□ -0.61
CCM2-210ENST00000478169 TRIM6-TRIM34B2RNG4 842 aa11.26□□□□□ -0.61
CCM2-210ENST00000478169 KDM4AO75164 1064 aa11.26□□□□□ -0.61
CCM2-210ENST00000478169 PPFIA4O75335 1185 aa11.26□□□□□ -0.61
CCM2-210ENST00000478169 HOXD8P13378 290 aaPredicted RBP11.26□□□□□ -0.61
CCM2-210ENST00000478169 EIF2AK2P19525 551 aaKnown RBP11.26□□□□□ -0.61
CCM2-210ENST00000478169 GHRHRQ02643 423 aa11.26□□□□□ -0.61
CCM2-210ENST00000478169 KIAA0753Q2KHM9 967 aa11.26□□□□□ -0.61
CCM2-210ENST00000478169 TRIM71Q2Q1W2 868 aaKnown RBP11.26□□□□□ -0.61
CCM2-210ENST00000478169 TMCO2Q7Z6W1 182 aaPredicted RBP11.26□□□□□ -0.61
CCM2-210ENST00000478169 FBXO11Q86XK2 927 aa11.26□□□□□ -0.61
CCM2-210ENST00000478169 DHX37Q8IY37 1157 aaKnown RBP11.26□□□□□ -0.61
CCM2-210ENST00000478169 SAMD3Q8N6K7 520 aa11.26□□□□□ -0.61
CCM2-210ENST00000478169 ZSCAN10Q96SZ4 725 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms