RNA–Protein interactions for RNA: ENST00000478021.1

TRAF4-211, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-211ENST00000478021 CPT1AP50416 773 aa26.19■■□□□ 1.78
TRAF4-211ENST00000478021 PSMC6P62333 389 aa26.19■■□□□ 1.78
TRAF4-211ENST00000478021 VSIG10LQ86VR7 867 aa26.19■■□□□ 1.78
TRAF4-211ENST00000478021 FBXL16Q8N461 479 aa26.19■■□□□ 1.78
TRAF4-211ENST00000478021 PSTPIP2Q9H939 334 aa26.19■■□□□ 1.78
TRAF4-211ENST00000478021 CYP46A1Q9Y6A2 500 aa26.19■■□□□ 1.78
TRAF4-211ENST00000478021 MRVI1Q9Y6F6 885 aa26.19■■□□□ 1.78
TRAF4-211ENST00000478021 MYH7BA7E2Y1 1941 aa26.19■■□□□ 1.78
TRAF4-211ENST00000478021 TRIM43BA6NCK2 446 aa26.18■■□□□ 1.78
TRAF4-211ENST00000478021 ARVCFO00192 962 aa26.18■■□□□ 1.78
TRAF4-211ENST00000478021 CLTBP09497 229 aa26.18■■□□□ 1.78
TRAF4-211ENST00000478021 TOB2Q14106 344 aaPredicted RBP26.18■■□□□ 1.78
TRAF4-211ENST00000478021 UBE2SQ16763 222 aa26.18■■□□□ 1.78
TRAF4-211ENST00000478021 TRIM43Q96BQ3 446 aaPredicted RBP26.18■■□□□ 1.78
TRAF4-211ENST00000478021 LARP6Q9BRS8 491 aaKnown RBP26.18■■□□□ 1.78
TRAF4-211ENST00000478021 TM6SF1Q9BZW5 370 aa26.18■■□□□ 1.78
TRAF4-211ENST00000478021 FRMPD4Q14CM0 1322 aa26.17■■□□□ 1.78
TRAF4-211ENST00000478021 PIK3CDO00329 1044 aa26.17■■□□□ 1.78
TRAF4-211ENST00000478021 CABYRO75952 493 aa26.17■■□□□ 1.78
TRAF4-211ENST00000478021 GH1P01241 217 aa26.17■■□□□ 1.78
TRAF4-211ENST00000478021 CDK7P50613 346 aa26.17■■□□□ 1.78
TRAF4-211ENST00000478021 TYW1BQ6NUM6 668 aa26.17■■□□□ 1.78
TRAF4-211ENST00000478021 ANKRD33Q7Z3H0 272 aa26.17■■□□□ 1.78
TRAF4-211ENST00000478021 LBHD1Q9BQE6 289 aaPredicted RBP26.17■■□□□ 1.78
TRAF4-211ENST00000478021 POLR3EQ9NVU0 708 aa26.17■■□□□ 1.78
TRAF4-211ENST00000478021 DDX41Q9UJV9 622 aaKnown RBP26.17■■□□□ 1.78
TRAF4-211ENST00000478021 NID2Q14112 1375 aa26.17■■□□□ 1.78
TRAF4-211ENST00000478021 CCDC196A0A1B0GTZ2 297 aa26.16■■□□□ 1.78
TRAF4-211ENST00000478021 DCDC2CA8MYV0 355 aa26.16■■□□□ 1.78
TRAF4-211ENST00000478021 SORBS3O60504 671 aa26.16■■□□□ 1.78
TRAF4-211ENST00000478021 NAPAP54920 295 aa26.16■■□□□ 1.78
TRAF4-211ENST00000478021 PURAQ00577 322 aaKnown RBP26.16■■□□□ 1.78
TRAF4-211ENST00000478021 ARHGAP1Q07960 439 aa26.16■■□□□ 1.78
TRAF4-211ENST00000478021 FAAP100Q0VG06 881 aa26.16■■□□□ 1.78
TRAF4-211ENST00000478021 ITGA7Q13683 1181 aa26.16■■□□□ 1.78
TRAF4-211ENST00000478021 BRDTQ58F21 947 aaPredicted RBP26.16■■□□□ 1.78
TRAF4-211ENST00000478021 UBE2OQ9C0C9 1292 aaKnown RBP26.16■■□□□ 1.78
TRAF4-211ENST00000478021 GRIN2DO15399 1336 aa26.15■■□□□ 1.78
TRAF4-211ENST00000478021 MROH7Q68CQ1 1323 aa26.15■■□□□ 1.78
TRAF4-211ENST00000478021 PDIA3P30101 505 aaKnown RBP26.15■■□□□ 1.78
TRAF4-211ENST00000478021 CCT2P78371 535 aaKnown RBP26.15■■□□□ 1.78
TRAF4-211ENST00000478021 MRPS9P82933 396 aaKnown RBP26.15■■□□□ 1.78
TRAF4-211ENST00000478021 AFG1LQ8WV93 481 aa26.15■■□□□ 1.78
TRAF4-211ENST00000478021 TOX2Q96NM4 488 aa26.15■■□□□ 1.78
TRAF4-211ENST00000478021 NCOA5Q9HCD5 579 aaKnown RBP26.15■■□□□ 1.78
TRAF4-211ENST00000478021 PDRG1Q9NUG6 133 aa26.15■■□□□ 1.78
TRAF4-211ENST00000478021 TMEM39AQ9NV64 488 aa26.15■■□□□ 1.78
TRAF4-211ENST00000478021 A6NJR5 290 aa26.14■■□□□ 1.78
TRAF4-211ENST00000478021 STXBP3O00186 592 aa26.14■■□□□ 1.78
TRAF4-211ENST00000478021 PPFIA3O75145 1194 aa26.14■■□□□ 1.78
TRAF4-211ENST00000478021 BMP8BP34820 402 aa26.14■■□□□ 1.78
TRAF4-211ENST00000478021 PPP1R13LQ8WUF5 828 aa26.14■■□□□ 1.78
TRAF4-211ENST00000478021 RTEL1Q9NZ71 1219 aa26.14■■□□□ 1.78
TRAF4-211ENST00000478021 TRIOBPQ9H2D6 2365 aa26.14■■□□□ 1.77
TRAF4-211ENST00000478021 DOCK5Q9H7D0 1870 aa26.13■■□□□ 1.77
TRAF4-211ENST00000478021 SEC24BO95487 1268 aa26.13■■□□□ 1.77
TRAF4-211ENST00000478021 MMP3P08254 477 aa26.13■■□□□ 1.77
TRAF4-211ENST00000478021 ITGB8P26012 769 aa26.13■■□□□ 1.77
TRAF4-211ENST00000478021 FAM126BQ8IXS8 530 aa26.13■■□□□ 1.77
TRAF4-211ENST00000478021 SLC43A3Q8NBI5 491 aa26.13■■□□□ 1.77
TRAF4-211ENST00000478021 BADQ92934 168 aa26.13■■□□□ 1.77
TRAF4-211ENST00000478021 PHKBQ93100 1093 aa26.13■■□□□ 1.77
TRAF4-211ENST00000478021 MTG1Q9BT17 334 aaPredicted RBP26.13■■□□□ 1.77
TRAF4-211ENST00000478021 EVCP57679 992 aa26.12■■□□□ 1.77
TRAF4-211ENST00000478021 PPP1R18Q6NYC8 613 aa26.12■■□□□ 1.77
TRAF4-211ENST00000478021 DHX37Q8IY37 1157 aaKnown RBP26.12■■□□□ 1.77
TRAF4-211ENST00000478021 BARHL2Q9NY43 387 aa26.12■■□□□ 1.77
TRAF4-211ENST00000478021 SCN10AQ9Y5Y9 1956 aa26.12■■□□□ 1.77
TRAF4-211ENST00000478021 hCG_1984214I3L0E3 225 aa26.11■■□□□ 1.77
TRAF4-211ENST00000478021 KIAA0355O15063 1070 aa26.11■■□□□ 1.77
TRAF4-211ENST00000478021 TLR3O15455 904 aaKnown RBP26.11■■□□□ 1.77
TRAF4-211ENST00000478021 GGPS1O95749 300 aa26.11■■□□□ 1.77
TRAF4-211ENST00000478021 RAG1P15918 1043 aa26.11■■□□□ 1.77
TRAF4-211ENST00000478021 UBA1P22314 1058 aaKnown RBP26.11■■□□□ 1.77
TRAF4-211ENST00000478021 ADCY7P51828 1080 aa26.11■■□□□ 1.77
TRAF4-211ENST00000478021 SP2Q02086 613 aa26.11■■□□□ 1.77
TRAF4-211ENST00000478021 PFKFB3Q16875 520 aaPredicted RBP26.11■■□□□ 1.77
TRAF4-211ENST00000478021 PCNX4Q63HM2 1172 aa26.11■■□□□ 1.77
TRAF4-211ENST00000478021 ZNF713Q8N859 430 aaPredicted RBP26.11■■□□□ 1.77
TRAF4-211ENST00000478021 RIC8AQ9NPQ8 531 aa26.11■■□□□ 1.77
TRAF4-211ENST00000478021 PCDHA6Q9UN73 950 aa26.11■■□□□ 1.77
TRAF4-211ENST00000478021 PCDHA8Q9Y5H6 950 aa26.11■■□□□ 1.77
TRAF4-211ENST00000478021 SMCO2A6NFE2 343 aa26.1■■□□□ 1.77
TRAF4-211ENST00000478021 SPDYE3A6NKU9 549 aa26.1■■□□□ 1.77
TRAF4-211ENST00000478021 SCG2P13521 617 aa26.1■■□□□ 1.77
TRAF4-211ENST00000478021 FXR1P51114 621 aaKnown RBP eCLIP26.1■■□□□ 1.77
TRAF4-211ENST00000478021 CHMP4BP1P59074 171 aa26.1■■□□□ 1.77
TRAF4-211ENST00000478021 STK3Q13188 491 aa26.1■■□□□ 1.77
TRAF4-211ENST00000478021 NTRK3Q16288 839 aa26.1■■□□□ 1.77
TRAF4-211ENST00000478021 GNPTABQ3T906 1256 aa26.1■■□□□ 1.77
TRAF4-211ENST00000478021 KCNV1Q6PIU1 500 aa26.1■■□□□ 1.77
TRAF4-211ENST00000478021 PGBD1Q96JS3 809 aa26.1■■□□□ 1.77
TRAF4-211ENST00000478021 INPP4AQ96PE3 977 aaPredicted RBP26.1■■□□□ 1.77
TRAF4-211ENST00000478021 TBX21Q9UL17 535 aa26.1■■□□□ 1.77
TRAF4-211ENST00000478021 A0A1W2PPC1 479 aa26.09■■□□□ 1.77
TRAF4-211ENST00000478021 PRPF3O43395 683 aaKnown RBP26.09■■□□□ 1.77
TRAF4-211ENST00000478021 KPNA6O60684 536 aa26.09■■□□□ 1.77
TRAF4-211ENST00000478021 STAM2O75886 525 aa26.09■■□□□ 1.77
TRAF4-211ENST00000478021 CD4P01730 458 aa26.09■■□□□ 1.77
TRAF4-211ENST00000478021 ANAPC15P60006 121 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 118.8 ms