RNA–Protein interactions for RNA: ENST00000477984.1

LINC00336-201, long intergenic non-protein coding RNA 336, humanhuman

TSL 2 BASIC

Gene LINC00336, Length 2,107 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00336-201ENST00000477984 PNKPQ96T60 521 aa19.21■□□□□ 0.67
LINC00336-201ENST00000477984 NAP1L4Q99733 375 aaKnown RBP19.21■□□□□ 0.67
LINC00336-201ENST00000477984 RAB34Q9BZG1 259 aa19.21■□□□□ 0.67
LINC00336-201ENST00000477984 ATF5Q9Y2D1 282 aaPredicted RBP19.21■□□□□ 0.67
LINC00336-201ENST00000477984 A0A1W2PQC6 194 aa19.21■□□□□ 0.67
LINC00336-201ENST00000477984 H7C1D1 291 aa19.21■□□□□ 0.67
LINC00336-201ENST00000477984 N4BP3O15049 544 aa19.21■□□□□ 0.67
LINC00336-201ENST00000477984 GCFC2P16383 781 aaKnown RBP19.21■□□□□ 0.67
LINC00336-201ENST00000477984 AMPD3Q01432 767 aa19.21■□□□□ 0.67
LINC00336-201ENST00000477984 TCP11X2Q5H9J9 407 aa19.21■□□□□ 0.67
LINC00336-201ENST00000477984 RSBN1LQ6PCB5 846 aaPredicted RBP19.21■□□□□ 0.67
LINC00336-201ENST00000477984 CPLX3Q8WVH0 158 aa19.21■□□□□ 0.67
LINC00336-201ENST00000477984 CCDC47Q96A33 483 aaKnown RBP19.21■□□□□ 0.67
LINC00336-201ENST00000477984 TRIM9Q9C026 710 aa19.21■□□□□ 0.67
LINC00336-201ENST00000477984 TMEM51Q9NW97 253 aa19.21■□□□□ 0.67
LINC00336-201ENST00000477984 LRWD1Q9UFC0 647 aa19.21■□□□□ 0.67
LINC00336-201ENST00000477984 SYNPO2Q9UMS6 1093 aa19.21■□□□□ 0.67
LINC00336-201ENST00000477984 PSME4Q14997 1843 aa19.2■□□□□ 0.66
LINC00336-201ENST00000477984 STIM1Q13586 685 aa19.2■□□□□ 0.66
LINC00336-201ENST00000477984 ZSCAN26Q16670 478 aa19.2■□□□□ 0.66
LINC00336-201ENST00000477984 STK17AQ9UEE5 414 aa19.2■□□□□ 0.66
LINC00336-201ENST00000477984 PUF60Q9UHX1 559 aaKnown RBP19.2■□□□□ 0.66
LINC00336-201ENST00000477984 F5H6K3 240 aa19.19■□□□□ 0.66
LINC00336-201ENST00000477984 GDF11O95390 407 aa19.19■□□□□ 0.66
LINC00336-201ENST00000477984 KLRC3Q07444 240 aa19.19■□□□□ 0.66
LINC00336-201ENST00000477984 CDC37Q16543 378 aaPredicted RBP19.19■□□□□ 0.66
LINC00336-201ENST00000477984 RBM26Q5T8P6 1007 aaKnown RBP19.19■□□□□ 0.66
LINC00336-201ENST00000477984 VIPAS39Q9H9C1 493 aa19.19■□□□□ 0.66
LINC00336-201ENST00000477984 A0A0U1RQJ8 604 aa19.19■□□□□ 0.66
LINC00336-201ENST00000477984 PSMD14O00487 310 aa19.19■□□□□ 0.66
LINC00336-201ENST00000477984 VIL1P09327 827 aaKnown RBP19.19■□□□□ 0.66
LINC00336-201ENST00000477984 PPP1R2P41236 205 aa19.19■□□□□ 0.66
LINC00336-201ENST00000477984 RAD51AP2Q09MP3 1159 aa19.19■□□□□ 0.66
LINC00336-201ENST00000477984 GRB10Q13322 594 aa19.19■□□□□ 0.66
LINC00336-201ENST00000477984 ACRBPQ8NEB7 543 aa19.19■□□□□ 0.66
LINC00336-201ENST00000477984 ATRIPQ8WXE1 791 aa19.19■□□□□ 0.66
LINC00336-201ENST00000477984 ACBD3Q9H3P7 528 aa19.19■□□□□ 0.66
LINC00336-201ENST00000477984 HAUS4Q9H6D7 363 aa19.19■□□□□ 0.66
LINC00336-201ENST00000477984 ABCB6Q9NP58 842 aa19.19■□□□□ 0.66
LINC00336-201ENST00000477984 TMOD2Q9NZR1 351 aa19.19■□□□□ 0.66
LINC00336-201ENST00000477984 HERC5Q9UII4 1024 aaKnown RBP19.19■□□□□ 0.66
LINC00336-201ENST00000477984 SPDYE2BA6NHP3 402 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 KCNJ18B7U540 433 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 SPDYE6P0CI01 402 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 MCM3P25205 808 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 ACTN2P35609 894 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 KCNJ12Q14500 433 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 DHTKD1Q96HY7 919 aaPredicted RBP19.18■□□□□ 0.66
LINC00336-201ENST00000477984 RPGRIP1Q96KN7 1286 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 GMLQ99445 158 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 DNAJC7Q99615 494 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 DDX25Q9UHL0 483 aaKnown RBP19.18■□□□□ 0.66
LINC00336-201ENST00000477984 MYO6Q9UM54 1294 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 PCDHA1Q9Y5I3 950 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 SOCS7O14512 581 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 PSMA7O14818 248 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 RAD21O60216 631 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 COBLO75128 1261 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 NDUFB10O96000 172 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 COBLL1Q53SF7 1204 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 FAM71BQ8TC56 605 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 PNMA5Q96PV4 448 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 CSRNP1Q96S65 589 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 VPS33BQ9H267 617 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 PDE11AQ9HCR9 933 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 MED4Q9NPJ6 270 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 EXOC1Q9NV70 894 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 MAPK8IP1Q9UQF2 711 aa19.18■□□□□ 0.66
LINC00336-201ENST00000477984 GH2P01242 217 aa19.17■□□□□ 0.66
LINC00336-201ENST00000477984 CAPN2P17655 700 aa19.17■□□□□ 0.66
LINC00336-201ENST00000477984 EEF1GP26641 437 aaKnown RBP19.17■□□□□ 0.66
LINC00336-201ENST00000477984 MCTP2Q6DN12 878 aa19.17■□□□□ 0.66
LINC00336-201ENST00000477984 SV2BQ7L1I2 683 aa19.17■□□□□ 0.66
LINC00336-201ENST00000477984 NOC3LQ8WTT2 800 aaKnown RBP19.17■□□□□ 0.66
LINC00336-201ENST00000477984 NUP88Q99567 741 aaPredicted RBP19.17■□□□□ 0.66
LINC00336-201ENST00000477984 THAP9Q9H5L6 903 aa19.17■□□□□ 0.66
LINC00336-201ENST00000477984 BLOC1S4Q9NUP1 217 aa19.17■□□□□ 0.66
LINC00336-201ENST00000477984 HDAC9Q9UKV0 1011 aa19.17■□□□□ 0.66
LINC00336-201ENST00000477984 EPN1Q9Y6I3 576 aaPredicted RBP19.17■□□□□ 0.66
LINC00336-201ENST00000477984 IVLP07476 585 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 KRT9P35527 623 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 ASIC1P78348 528 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 JAG1P78504 1218 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 PDE4DQ08499 809 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 TRAPPC11Q7Z392 1133 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 PDGFDQ9GZP0 370 aaPredicted RBP19.16■□□□□ 0.66
LINC00336-201ENST00000477984 ZSWIM4Q9H7M6 989 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 ARFGEF1Q9Y6D6 1849 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 NDUFA10O95299 355 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 KCNA3P22001 575 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 CCT6AP40227 531 aaKnown RBP19.16■□□□□ 0.66
LINC00336-201ENST00000477984 USP11P51784 963 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 VSNL1P62760 191 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 AP3B2Q13367 1082 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 RRP1BQ14684 758 aaKnown RBP19.16■□□□□ 0.66
LINC00336-201ENST00000477984 CASP8Q14790 479 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 TMEM119Q4V9L6 283 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 SYDE2Q5VT97 1194 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 KRT79Q5XKE5 535 aa19.16■□□□□ 0.66
LINC00336-201ENST00000477984 BTNL9Q6UXG8 535 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms