RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 USP14P54578 494 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 TMEM132BQ14DG7 1078 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 GPR162Q16538 588 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 ARSHQ5FYA8 562 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 OTOP1Q7RTM1 612 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 MLKLQ8NB16 471 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 HOOK2Q96ED9 719 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 TAF1DQ9H5J8 278 aaPredicted RBP13.69□□□□□ -0.22
PRPF39-203ENST00000477626 MGAMO43451 1857 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 LRRC10BA6NIK2 292 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 HOXA13P31271 388 aaPredicted RBP13.69□□□□□ -0.22
PRPF39-203ENST00000477626 TBX2Q13207 712 aaPredicted RBP13.69□□□□□ -0.22
PRPF39-203ENST00000477626 CCDC144BQ3MJ40 725 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 TPRNQ4KMQ1 711 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 CNKSR2Q8WXI2 1034 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 RGS20O76081 388 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 USH1GQ495M9 461 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 TREML2Q5T2D2 321 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 ADSSL1Q8N142 457 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 AOPEPQ8N6M6 819 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 KIAA0895Q8NCT3 520 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 RAD54LQ92698 747 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 FGD4Q96M96 766 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 SDF4Q9BRK5 362 aa13.69□□□□□ -0.22
PRPF39-203ENST00000477626 WRAP73Q9P2S5 460 aaPredicted RBP13.69□□□□□ -0.22
PRPF39-203ENST00000477626 MED24O75448 989 aa13.68□□□□□ -0.22
PRPF39-203ENST00000477626 CABP7Q86V35 215 aa13.68□□□□□ -0.22
PRPF39-203ENST00000477626 SYTL5Q8TDW5 730 aaPredicted RBP13.68□□□□□ -0.22
PRPF39-203ENST00000477626 HTTP42858 3142 aa13.68□□□□□ -0.22
PRPF39-203ENST00000477626 FDX1P10109 184 aa13.68□□□□□ -0.22
PRPF39-203ENST00000477626 ZNF658Q5TYW1 1059 aaPredicted RBP13.68□□□□□ -0.22
PRPF39-203ENST00000477626 KIFC2Q96AC6 838 aa13.68□□□□□ -0.22
PRPF39-203ENST00000477626 CDCA5Q96FF9 252 aa13.68□□□□□ -0.22
PRPF39-203ENST00000477626 FAM20AQ96MK3 541 aa13.68□□□□□ -0.22
PRPF39-203ENST00000477626 TTC12Q9H892 705 aaPredicted RBP13.68□□□□□ -0.22
PRPF39-203ENST00000477626 KCND1Q9NSA2 647 aa13.68□□□□□ -0.22
PRPF39-203ENST00000477626 STK17AQ9UEE5 414 aa13.68□□□□□ -0.22
PRPF39-203ENST00000477626 SPDYE5A6NIY4 337 aa13.68□□□□□ -0.22
PRPF39-203ENST00000477626 UNCXA6NJT0 531 aa13.68□□□□□ -0.22
PRPF39-203ENST00000477626 EML1O00423 815 aa13.68□□□□□ -0.22
PRPF39-203ENST00000477626 PMS1P54277 932 aaKnown RBP13.68□□□□□ -0.22
PRPF39-203ENST00000477626 SPP2Q13103 211 aa13.68□□□□□ -0.22
PRPF39-203ENST00000477626 PCNX4Q63HM2 1172 aa13.68□□□□□ -0.22
PRPF39-203ENST00000477626 MYMKA6NI61 221 aa13.67□□□□□ -0.22
PRPF39-203ENST00000477626 RPN1P04843 607 aaKnown RBP13.67□□□□□ -0.22
PRPF39-203ENST00000477626 ATP1A3P13637 1013 aa13.67□□□□□ -0.22
PRPF39-203ENST00000477626 SLC30A10Q6XR72 485 aa13.67□□□□□ -0.22
PRPF39-203ENST00000477626 PDILTQ8N807 584 aa13.67□□□□□ -0.22
PRPF39-203ENST00000477626 ZCWPW2Q504Y3 356 aa13.67□□□□□ -0.22
PRPF39-203ENST00000477626 CEP57L1Q8IYX8 460 aa13.67□□□□□ -0.22
PRPF39-203ENST00000477626 FIZ1Q96SL8 496 aa13.67□□□□□ -0.22
PRPF39-203ENST00000477626 R3HDMLQ9H3Y0 253 aa13.67□□□□□ -0.22
PRPF39-203ENST00000477626 BIN1O00499 593 aa13.67□□□□□ -0.22
PRPF39-203ENST00000477626 EPHX2P34913 555 aa13.67□□□□□ -0.22
PRPF39-203ENST00000477626 ATG4CQ96DT6 458 aa13.67□□□□□ -0.22
PRPF39-203ENST00000477626 POLR3CQ9BUI4 534 aaPredicted RBP13.67□□□□□ -0.22
PRPF39-203ENST00000477626 TMX1Q9H3N1 280 aa13.67□□□□□ -0.22
PRPF39-203ENST00000477626 MRPL11Q9Y3B7 192 aaKnown RBP13.67□□□□□ -0.22
PRPF39-203ENST00000477626 MCM3APO60318 1980 aa13.66□□□□□ -0.22
PRPF39-203ENST00000477626 STBD1O95210 358 aa13.66□□□□□ -0.22
PRPF39-203ENST00000477626 MAP3K9P80192 1104 aa13.66□□□□□ -0.22
PRPF39-203ENST00000477626 CATSPER3Q86XQ3 398 aa13.66□□□□□ -0.22
PRPF39-203ENST00000477626 KCTD17Q8N5Z5 321 aa13.66□□□□□ -0.22
PRPF39-203ENST00000477626 DUSP9Q99956 384 aaKnown RBP13.66□□□□□ -0.22
PRPF39-203ENST00000477626 ZYXQ15942 572 aaKnown RBP13.66□□□□□ -0.22
PRPF39-203ENST00000477626 KMT5BQ4FZB7 885 aa13.66□□□□□ -0.22
PRPF39-203ENST00000477626 TTI2Q6NXR4 508 aa13.66□□□□□ -0.22
PRPF39-203ENST00000477626 CCDC174Q6PII3 467 aa13.66□□□□□ -0.22
PRPF39-203ENST00000477626 EPM2AIP1Q7L775 607 aaPredicted RBP13.66□□□□□ -0.22
PRPF39-203ENST00000477626 SMARCE1Q969G3 411 aa13.66□□□□□ -0.22
PRPF39-203ENST00000477626 STRA6Q9BX79 667 aa13.66□□□□□ -0.22
PRPF39-203ENST00000477626 BLZF1Q9H2G9 400 aa13.66□□□□□ -0.22
PRPF39-203ENST00000477626 ZNF500O60304 480 aaPredicted RBP13.65□□□□□ -0.22
PRPF39-203ENST00000477626 EDNRBP24530 442 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 RPA1P27694 616 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 HOXD13P35453 343 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 MYL5Q02045 173 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 PPATQ06203 517 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 ITGB3BPQ13352 177 aaPredicted RBP13.65□□□□□ -0.22
PRPF39-203ENST00000477626 SUPT20HL1Q3ZLR7 823 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 TMEM139Q8IV31 216 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 SLFN12Q8IYM2 578 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 NKRFO15226 690 aaKnown RBP eCLIP13.65□□□□□ -0.22
PRPF39-203ENST00000477626 TXKP42681 527 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 PGM5Q15124 567 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 PROCA1Q8NCQ7 364 aaPredicted RBP13.65□□□□□ -0.22
PRPF39-203ENST00000477626 TMEM174Q8WUU8 243 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 CLMNQ96JQ2 1002 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 NAP1L5Q96NT1 182 aaPredicted RBP13.65□□□□□ -0.22
PRPF39-203ENST00000477626 AS3MTQ9HBK9 375 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 RWDD2AQ9UIY3 292 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 ZHX2Q9Y6X8 837 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 A0A1B0GTH6 734 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 GCOM1H8Y6P7 765 aaPredicted RBP13.65□□□□□ -0.22
PRPF39-203ENST00000477626 GRIN3BO60391 1043 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 POLR2MP0CAP2 368 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 POTEIP0CG38 1075 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 POTEJP0CG39 1038 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 FECHP22830 423 aa13.65□□□□□ -0.22
PRPF39-203ENST00000477626 STAT3P40763 770 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms