RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 ZBTB8AQ96BR9 441 aa7.27□□□□□ -1.25
VPS50-213ENST00000477572 AP5M1Q9H0R1 490 aa7.27□□□□□ -1.25
VPS50-213ENST00000477572 LUC7LQ9NQ29 371 aaKnown RBP7.27□□□□□ -1.25
VPS50-213ENST00000477572 PALD1Q9ULE6 856 aa7.27□□□□□ -1.25
VPS50-213ENST00000477572 MYO1BO43795 1136 aa7.26□□□□□ -1.25
VPS50-213ENST00000477572 C8BP07358 591 aa7.26□□□□□ -1.25
VPS50-213ENST00000477572 KCNC1P48547 511 aa7.26□□□□□ -1.25
VPS50-213ENST00000477572 PPP2R2AP63151 447 aa7.26□□□□□ -1.25
VPS50-213ENST00000477572 HTRA3P83110 453 aa7.26□□□□□ -1.25
VPS50-213ENST00000477572 KCNAB2Q13303 367 aa7.26□□□□□ -1.25
VPS50-213ENST00000477572 LIPIQ6XZB0 460 aa7.26□□□□□ -1.25
VPS50-213ENST00000477572 MILR1Q7Z6M3 343 aa7.26□□□□□ -1.25
VPS50-213ENST00000477572 SAPCD2Q86UD0 394 aa7.26□□□□□ -1.25
VPS50-213ENST00000477572 TMEM169Q96HH4 297 aa7.26□□□□□ -1.25
VPS50-213ENST00000477572 NCANO14594 1321 aa7.26□□□□□ -1.25
VPS50-213ENST00000477572 A0A1W2PQU0 124 aa7.25□□□□□ -1.25
VPS50-213ENST00000477572 CPP00450 1065 aa7.25□□□□□ -1.25
VPS50-213ENST00000477572 SCG5P05408 212 aa7.25□□□□□ -1.25
VPS50-213ENST00000477572 LTBRP36941 435 aa7.25□□□□□ -1.25
VPS50-213ENST00000477572 STAT5AP42229 794 aa7.25□□□□□ -1.25
VPS50-213ENST00000477572 DLX2Q07687 328 aaPredicted RBP7.25□□□□□ -1.25
VPS50-213ENST00000477572 E4F1Q66K89 784 aaPredicted RBP7.25□□□□□ -1.25
VPS50-213ENST00000477572 CD300LDQ6UXZ3 194 aa7.25□□□□□ -1.25
VPS50-213ENST00000477572 CPA5Q8WXQ8 436 aa7.25□□□□□ -1.25
VPS50-213ENST00000477572 KRTAP4-9Q9BYQ8 210 aa7.25□□□□□ -1.25
VPS50-213ENST00000477572 RTEL1Q9NZ71 1219 aa7.25□□□□□ -1.25
VPS50-213ENST00000477572 AGRPO00253 132 aa7.24□□□□□ -1.25
VPS50-213ENST00000477572 CYP2C8P10632 490 aa7.24□□□□□ -1.25
VPS50-213ENST00000477572 DDR2Q16832 855 aa7.24□□□□□ -1.25
VPS50-213ENST00000477572 ETV3LQ6ZN32 361 aa7.24□□□□□ -1.25
VPS50-213ENST00000477572 C1orf159Q96HA4 380 aa7.24□□□□□ -1.25
VPS50-213ENST00000477572 CCDC140Q96MF4 163 aa7.24□□□□□ -1.25
VPS50-213ENST00000477572 GORASP1Q9BQQ3 440 aa7.24□□□□□ -1.25
VPS50-213ENST00000477572 IER2Q9BTL4 223 aa7.24□□□□□ -1.25
VPS50-213ENST00000477572 SPATA6Q9NWH7 488 aaPredicted RBP7.24□□□□□ -1.25
VPS50-213ENST00000477572 CLDND1Q9NY35 253 aa7.24□□□□□ -1.25
VPS50-213ENST00000477572 PODXL2Q9NZ53 605 aa7.24□□□□□ -1.25
VPS50-213ENST00000477572 E9PSI1 815 aa7.23□□□□□ -1.25
VPS50-213ENST00000477572 KLF4O43474 513 aa7.23□□□□□ -1.25
VPS50-213ENST00000477572 ACBD5Q5T8D3 534 aaPredicted RBP7.23□□□□□ -1.25
VPS50-213ENST00000477572 NT5DC1Q5TFE4 455 aa7.23□□□□□ -1.25
VPS50-213ENST00000477572 MROH9Q5TGP6 573 aa7.23□□□□□ -1.25
VPS50-213ENST00000477572 SLC43A3Q8NBI5 491 aa7.23□□□□□ -1.25
VPS50-213ENST00000477572 SEC14L1Q92503 715 aa7.23□□□□□ -1.25
VPS50-213ENST00000477572 COA3Q9Y2R0 106 aaPredicted RBP7.23□□□□□ -1.25
VPS50-213ENST00000477572 CAPNS1P04632 268 aa7.22□□□□□ -1.25
VPS50-213ENST00000477572 LSAMPQ13449 338 aa7.22□□□□□ -1.25
VPS50-213ENST00000477572 SLC35F1Q5T1Q4 408 aa7.22□□□□□ -1.25
VPS50-213ENST00000477572 USP53Q70EK8 1073 aa7.22□□□□□ -1.25
VPS50-213ENST00000477572 CARFQ8N187 725 aa7.22□□□□□ -1.25
VPS50-213ENST00000477572 DDX1Q92499 740 aaKnown RBP7.22□□□□□ -1.25
VPS50-213ENST00000477572 GMLQ99445 158 aa7.22□□□□□ -1.25
VPS50-213ENST00000477572 IGSF5Q9NSI5 407 aa7.22□□□□□ -1.25
VPS50-213ENST00000477572 USP40Q9NVE5 1235 aa7.22□□□□□ -1.25
VPS50-213ENST00000477572 X6R8D5 127 aa7.22□□□□□ -1.25
VPS50-213ENST00000477572 PRICKLE3O43900 615 aaPredicted RBP7.21□□□□□ -1.26
VPS50-213ENST00000477572 DLX3O60479 287 aa7.21□□□□□ -1.26
VPS50-213ENST00000477572 SYN1P17600 705 aa7.21□□□□□ -1.26
VPS50-213ENST00000477572 SLC6A11P48066 632 aa7.21□□□□□ -1.26
VPS50-213ENST00000477572 GTF2A2P52657 109 aa7.21□□□□□ -1.26
VPS50-213ENST00000477572 CAP1Q01518 475 aa7.21□□□□□ -1.26
VPS50-213ENST00000477572 FERMT3Q86UX7 667 aa7.21□□□□□ -1.26
VPS50-213ENST00000477572 RIOX2Q8IUF8 465 aa7.21□□□□□ -1.26
VPS50-213ENST00000477572 KCTD13Q8WZ19 329 aa7.21□□□□□ -1.26
VPS50-213ENST00000477572 YIPF4Q9BSR8 244 aa7.21□□□□□ -1.26
VPS50-213ENST00000477572 EPN3Q9H201 632 aa7.21□□□□□ -1.26
VPS50-213ENST00000477572 SH3D21A4FU49 640 aa7.2□□□□□ -1.26
VPS50-213ENST00000477572 PRODHO43272 600 aa7.2□□□□□ -1.26
VPS50-213ENST00000477572 MSCO60682 206 aa7.2□□□□□ -1.26
VPS50-213ENST00000477572 SARSP49591 514 aaKnown RBP7.2□□□□□ -1.26
VPS50-213ENST00000477572 MIB1Q86YT6 1006 aa7.2□□□□□ -1.26
VPS50-213ENST00000477572 Q8N1Y9 231 aa7.2□□□□□ -1.26
VPS50-213ENST00000477572 ARRDC4Q8NCT1 418 aa7.2□□□□□ -1.26
VPS50-213ENST00000477572 C11orf84Q9BUA3 381 aaPredicted RBP7.2□□□□□ -1.26
VPS50-213ENST00000477572 JAM3Q9BX67 310 aa7.2□□□□□ -1.26
VPS50-213ENST00000477572 PPARGC1AQ9UBK2 798 aaKnown RBP7.2□□□□□ -1.26
VPS50-213ENST00000477572 PPP1R1BQ9UD71 204 aaPredicted RBP7.2□□□□□ -1.26
VPS50-213ENST00000477572 BLACEA4D250 179 aa7.19□□□□□ -1.26
VPS50-213ENST00000477572 SMARCA5O60264 1052 aaPredicted RBP7.19□□□□□ -1.26
VPS50-213ENST00000477572 RTP5Q14D33 572 aa7.19□□□□□ -1.26
VPS50-213ENST00000477572 YOD1Q5VVQ6 348 aaPredicted RBP7.19□□□□□ -1.26
VPS50-213ENST00000477572 STEAP3Q658P3 488 aa7.19□□□□□ -1.26
VPS50-213ENST00000477572 TTLL7Q6ZT98 887 aa7.19□□□□□ -1.26
VPS50-213ENST00000477572 FRMD5Q7Z6J6 570 aa7.19□□□□□ -1.26
VPS50-213ENST00000477572 PHF20Q9BVI0 1012 aa7.19□□□□□ -1.26
VPS50-213ENST00000477572 TRIM55Q9BYV6 548 aa7.19□□□□□ -1.26
VPS50-213ENST00000477572 NTMQ9P121 344 aa7.19□□□□□ -1.26
VPS50-213ENST00000477572 CCDC85CA6NKD9 419 aa7.18□□□□□ -1.26
VPS50-213ENST00000477572 H7BY64 318 aa7.18□□□□□ -1.26
VPS50-213ENST00000477572 HGSO14964 777 aaPredicted RBP7.18□□□□□ -1.26
VPS50-213ENST00000477572 MAP4K2Q12851 820 aa7.18□□□□□ -1.26
VPS50-213ENST00000477572 RAB33AQ14088 237 aa7.18□□□□□ -1.26
VPS50-213ENST00000477572 HSP90AA2PQ14568 343 aaPredicted RBP7.18□□□□□ -1.26
VPS50-213ENST00000477572 TESK1Q15569 626 aa7.18□□□□□ -1.26
VPS50-213ENST00000477572 CR1LQ2VPA4 569 aa7.18□□□□□ -1.26
VPS50-213ENST00000477572 SKOR2Q2VWA4 1001 aaPredicted RBP7.18□□□□□ -1.26
VPS50-213ENST00000477572 NAALADL2Q58DX5 795 aa7.18□□□□□ -1.26
VPS50-213ENST00000477572 KCNT2Q6UVM3 1135 aa7.18□□□□□ -1.26
VPS50-213ENST00000477572 ZC3H18Q86VM9 953 aaKnown RBP7.18□□□□□ -1.26
VPS50-213ENST00000477572 FAM126BQ8IXS8 530 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms