RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 IPPKQ9H8X2 491 aa4.86□□□□□ -1.63
TARDBP-208ENST00000477447 TRIM39Q9HCM9 518 aa4.86□□□□□ -1.63
TARDBP-208ENST00000477447 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.86□□□□□ -1.63
TARDBP-208ENST00000477447 DBR1Q9UK59 544 aaKnown RBP4.86□□□□□ -1.63
TARDBP-208ENST00000477447 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.86□□□□□ -1.63
TARDBP-208ENST00000477447 ZC3H12DA2A288 527 aaKnown RBP4.85□□□□□ -1.63
TARDBP-208ENST00000477447 LRRC10BA6NIK2 292 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 IRS4O14654 1257 aaPredicted RBP4.85□□□□□ -1.63
TARDBP-208ENST00000477447 DGKIO75912 1065 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 CYBBP04839 570 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 SRGAP2CP0DJJ0 459 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 PAK1Q13153 545 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 MLANAQ16655 118 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 PLEKHN1Q494U1 663 aaPredicted RBP4.85□□□□□ -1.63
TARDBP-208ENST00000477447 MROH9Q5TGP6 573 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 PAQR3Q6TCH7 311 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 RPTNQ6XPR3 784 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 PRR23BQ6ZRT6 265 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 KIAA0907Q7Z7F0 614 aaPredicted RBP4.85□□□□□ -1.63
TARDBP-208ENST00000477447 ZC3H7AQ8IWR0 971 aaKnown RBP4.85□□□□□ -1.63
TARDBP-208ENST00000477447 NETO2Q8NC67 525 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 SCLYQ96I15 445 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 MAGEB10Q96LZ2 347 aaPredicted RBP4.85□□□□□ -1.63
TARDBP-208ENST00000477447 JAM3Q9BX67 310 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 KRTAP9-2Q9BYQ4 174 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 EPB41L4BQ9H329 900 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 EPB41L1Q9H4G0 881 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 NUDT5Q9UKK9 219 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 SIT1Q9Y3P8 196 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 X6R8D5 127 aa4.85□□□□□ -1.63
TARDBP-208ENST00000477447 KRTAP9-6A0A140TA67 174 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 FAM47E-STBD1D6RA91 191 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 F8W031 263 aaPredicted RBP4.84□□□□□ -1.63
TARDBP-208ENST00000477447 ARVCFO00192 962 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 RFPL3O75679 317 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 DNAJC8O75937 253 aaPredicted RBP4.84□□□□□ -1.63
TARDBP-208ENST00000477447 CLSTN1O94985 981 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 GNAT1P11488 350 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 TMEM62Q0P6H9 643 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 NR1I3Q14994 352 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 TAF7LQ5H9L4 462 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 TMC6Q7Z403 805 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 RIOX2Q8IUF8 465 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 DHX37Q8IY37 1157 aaKnown RBP4.84□□□□□ -1.63
TARDBP-208ENST00000477447 NINJ1Q92982 152 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 AP5M1Q9H0R1 490 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 SLKQ9H2G2 1235 aaPredicted RBP4.84□□□□□ -1.63
TARDBP-208ENST00000477447 CDIP1Q9H305 208 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 DCP1AQ9NPI6 582 aaPredicted RBP4.84□□□□□ -1.63
TARDBP-208ENST00000477447 KLHL14Q9P2G3 628 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 PLAAQ9Y263 795 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 HCFC2Q9Y5Z7 792 aa4.84□□□□□ -1.63
TARDBP-208ENST00000477447 TCRBV16S1A1N1A0A5B0 115 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 KCNQ2O43526 872 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 OPA1O60313 960 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 SDSP20132 328 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 IGFALSP35858 605 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 MAPKAPK2P49137 400 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 DNM2P50570 870 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 ST5P78524 1137 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 ZNF460Q14592 562 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 DALRD3Q5D0E6 543 aaKnown RBP4.83□□□□□ -1.64
TARDBP-208ENST00000477447 OLFML2BQ68BL8 750 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 ZC3H14Q6PJT7 736 aaKnown RBP4.83□□□□□ -1.64
TARDBP-208ENST00000477447 NIM1KQ8IY84 436 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 CISD2Q8N5K1 135 aaKnown RBP4.83□□□□□ -1.64
TARDBP-208ENST00000477447 PCDH19Q8TAB3 1148 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 PIP4K2CQ8TBX8 421 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 SEC14L1Q92503 715 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 FBXW5Q969U6 566 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 MFSD3Q96ES6 412 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 PEX11GQ96HA9 241 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 FAM53CQ9NYF3 392 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 MAGEC2Q9UBF1 373 aaPredicted RBP4.83□□□□□ -1.64
TARDBP-208ENST00000477447 COQ6Q9Y2Z9 468 aa4.83□□□□□ -1.64
TARDBP-208ENST00000477447 TNPO3Q9Y5L0 923 aaKnown RBP4.83□□□□□ -1.64
TARDBP-208ENST00000477447 CCDC66A2RUB6 948 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 ABLIM1O14639 778 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 ASLP04424 464 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 PYGMP11217 842 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 COL6A2P12110 1019 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 VIPR1P32241 457 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 SLC6A11P48066 632 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 YBX1P67809 324 aaKnown RBP4.82□□□□□ -1.64
TARDBP-208ENST00000477447 PRR5P85299 388 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 SPIRE1Q08AE8 756 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 CHRNA2Q15822 529 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 FAM47CQ5HY64 1035 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 STEAP3Q658P3 488 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 CNNM4Q6P4Q7 775 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 OTOP3Q7RTS5 596 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.82□□□□□ -1.64
TARDBP-208ENST00000477447 BCAS3Q9H6U6 928 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 ZNF552Q9H707 407 aaPredicted RBP4.82□□□□□ -1.64
TARDBP-208ENST00000477447 KCNK12Q9HB15 430 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 CATSPERZQ9NTU4 200 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 PALD1Q9ULE6 856 aa4.82□□□□□ -1.64
TARDBP-208ENST00000477447 LOC105371045A0A1W2PR82 267 aa4.81□□□□□ -1.64
TARDBP-208ENST00000477447 KRIT1O00522 736 aa4.81□□□□□ -1.64
TARDBP-208ENST00000477447 WNT9AO14904 365 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms