RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 ZFP91Q96JP5 570 aaPredicted RBP32.56■■■□□ 2.8
VEGFA-211ENST00000476772 CCSER1Q9C0I3 900 aa32.56■■■□□ 2.8
VEGFA-211ENST00000476772 CYP39A1Q9NYL5 469 aa32.56■■■□□ 2.8
VEGFA-211ENST00000476772 PDHXO00330 501 aa32.56■■■□□ 2.8
VEGFA-211ENST00000476772 TBX3O15119 743 aa32.56■■■□□ 2.8
VEGFA-211ENST00000476772 CYP2C8P10632 490 aa32.56■■■□□ 2.8
VEGFA-211ENST00000476772 KARSQ15046 597 aaKnown RBP32.56■■■□□ 2.8
VEGFA-211ENST00000476772 RMDN3Q96TC7 470 aa32.56■■■□□ 2.8
VEGFA-211ENST00000476772 SLC45A1Q9Y2W3 748 aa32.56■■■□□ 2.8
VEGFA-211ENST00000476772 POTEMA6NI47 508 aa32.55■■■□□ 2.8
VEGFA-211ENST00000476772 EIF2AK2P19525 551 aaKnown RBP32.55■■■□□ 2.8
VEGFA-211ENST00000476772 ANKRD23Q86SG2 305 aa32.55■■■□□ 2.8
VEGFA-211ENST00000476772 RASAL3Q86YV0 1011 aa32.55■■■□□ 2.8
VEGFA-211ENST00000476772 SLFN12Q8IYM2 578 aa32.55■■■□□ 2.8
VEGFA-211ENST00000476772 MOV10L1Q9BXT6 1211 aaKnown RBP32.55■■■□□ 2.8
VEGFA-211ENST00000476772 RAB34Q9BZG1 259 aa32.55■■■□□ 2.8
VEGFA-211ENST00000476772 PXMP2Q9NR77 195 aa32.55■■■□□ 2.8
VEGFA-211ENST00000476772 LRWD1Q9UFC0 647 aa32.55■■■□□ 2.8
VEGFA-211ENST00000476772 PCDHA12Q9UN75 941 aa32.55■■■□□ 2.8
VEGFA-211ENST00000476772 MSH4O15457 936 aa32.54■■■□□ 2.8
VEGFA-211ENST00000476772 PDIA5Q14554 519 aa32.54■■■□□ 2.8
VEGFA-211ENST00000476772 E2F4Q16254 413 aa32.54■■■□□ 2.8
VEGFA-211ENST00000476772 CEP55Q53EZ4 464 aa32.54■■■□□ 2.8
VEGFA-211ENST00000476772 SAPCD2Q86UD0 394 aa32.54■■■□□ 2.8
VEGFA-211ENST00000476772 CABP7Q86V35 215 aa32.54■■■□□ 2.8
VEGFA-211ENST00000476772 NCAPG2Q86XI2 1143 aa32.54■■■□□ 2.8
VEGFA-211ENST00000476772 MAF1Q9H063 256 aa32.54■■■□□ 2.8
VEGFA-211ENST00000476772 ZNF157P51786 506 aaPredicted RBP32.53■■■□□ 2.8
VEGFA-211ENST00000476772 PGM5Q15124 567 aa32.53■■■□□ 2.8
VEGFA-211ENST00000476772 PCNX4Q63HM2 1172 aa32.53■■■□□ 2.8
VEGFA-211ENST00000476772 PLA2G4DQ86XP0 818 aa32.53■■■□□ 2.8
VEGFA-211ENST00000476772 PYM1Q9BRP8 204 aaKnown RBP32.53■■■□□ 2.8
VEGFA-211ENST00000476772 FBXO40Q9UH90 709 aa32.53■■■□□ 2.8
VEGFA-211ENST00000476772 FOXN1O15353 648 aa32.53■■■□□ 2.8
VEGFA-211ENST00000476772 CCDC192P0DO97 292 aa32.53■■■□□ 2.8
VEGFA-211ENST00000476772 ARHGEF16Q5VV41 709 aa32.53■■■□□ 2.8
VEGFA-211ENST00000476772 ELOA2Q8IYF1 753 aaPredicted RBP32.53■■■□□ 2.8
VEGFA-211ENST00000476772 FAM20AQ96MK3 541 aa32.53■■■□□ 2.8
VEGFA-211ENST00000476772 PDCD2LQ9BRP1 358 aa32.53■■■□□ 2.8
VEGFA-211ENST00000476772 DISC1Q9NRI5 854 aa32.53■■■□□ 2.8
VEGFA-211ENST00000476772 USP25Q9UHP3 1055 aa32.53■■■□□ 2.8
VEGFA-211ENST00000476772 LCTP09848 1927 aa32.52■■■□□ 2.8
VEGFA-211ENST00000476772 SLFN14P0C7P3 912 aa32.52■■■□□ 2.8
VEGFA-211ENST00000476772 TYRO3Q06418 890 aa32.52■■■□□ 2.8
VEGFA-211ENST00000476772 Q3C1V9 767 aa32.52■■■□□ 2.8
VEGFA-211ENST00000476772 SASS6Q6UVJ0 657 aa32.52■■■□□ 2.8
VEGFA-211ENST00000476772 FAM43AQ8N2R8 423 aa32.52■■■□□ 2.8
VEGFA-211ENST00000476772 IQUBQ8NA54 791 aa32.52■■■□□ 2.8
VEGFA-211ENST00000476772 SMC1BQ8NDV3 1235 aa32.52■■■□□ 2.8
VEGFA-211ENST00000476772 RASSF8Q8NHQ8 419 aa32.52■■■□□ 2.8
VEGFA-211ENST00000476772 MXRA8Q9BRK3 442 aa32.52■■■□□ 2.8
VEGFA-211ENST00000476772 MMTAG2Q9BU76 263 aaKnown RBP32.52■■■□□ 2.8
VEGFA-211ENST00000476772 KIAA1468Q9P260 1216 aa32.52■■■□□ 2.8
VEGFA-211ENST00000476772 PNOCQ13519 176 aa32.51■■■□□ 2.79
VEGFA-211ENST00000476772 CEP57L1Q8IYX8 460 aa32.51■■■□□ 2.79
VEGFA-211ENST00000476772 MEIS1O00470 390 aa32.5■■■□□ 2.79
VEGFA-211ENST00000476772 SLC25A27O95847 323 aa32.5■■■□□ 2.79
VEGFA-211ENST00000476772 ERCC3P19447 782 aa32.5■■■□□ 2.79
VEGFA-211ENST00000476772 MRPS9P82933 396 aaKnown RBP32.5■■■□□ 2.79
VEGFA-211ENST00000476772 MDM2Q00987 491 aaPredicted RBP32.5■■■□□ 2.79
VEGFA-211ENST00000476772 SETQ01105 290 aaPredicted RBP32.5■■■□□ 2.79
VEGFA-211ENST00000476772 ZRSR1Q15695 479 aaKnown RBP32.5■■■□□ 2.79
VEGFA-211ENST00000476772 GRAMD1CQ8IYS0 662 aa32.5■■■□□ 2.79
VEGFA-211ENST00000476772 ANKRD35Q8N283 1001 aa32.5■■■□□ 2.79
VEGFA-211ENST00000476772 SMCR8Q8TEV9 937 aaPredicted RBP32.5■■■□□ 2.79
VEGFA-211ENST00000476772 GTF3C2Q8WUA4 911 aaPredicted RBP32.5■■■□□ 2.79
VEGFA-211ENST00000476772 PTPN18Q99952 460 aa32.5■■■□□ 2.79
VEGFA-211ENST00000476772 CCDC39Q9UFE4 941 aa32.5■■■□□ 2.79
VEGFA-211ENST00000476772 ITGB5P18084 799 aa32.5■■■□□ 2.79
VEGFA-211ENST00000476772 RGMBQ6NW40 437 aa32.5■■■□□ 2.79
VEGFA-211ENST00000476772 KANK3Q6NY19 840 aa32.5■■■□□ 2.79
VEGFA-211ENST00000476772 R3HDMLQ9H3Y0 253 aa32.5■■■□□ 2.79
VEGFA-211ENST00000476772 HOOK1Q9UJC3 728 aaKnown RBP32.5■■■□□ 2.79
VEGFA-211ENST00000476772 MYCLP12524 364 aaPredicted RBP32.49■■■□□ 2.79
VEGFA-211ENST00000476772 STAT6P42226 847 aa32.49■■■□□ 2.79
VEGFA-211ENST00000476772 ERVK-9P63128 1117 aa32.49■■■□□ 2.79
VEGFA-211ENST00000476772 ERVK-24P63145 666 aa32.49■■■□□ 2.79
VEGFA-211ENST00000476772 POSTNQ15063 836 aa32.49■■■□□ 2.79
VEGFA-211ENST00000476772 RRAGBQ5VZM2 374 aa32.49■■■□□ 2.79
VEGFA-211ENST00000476772 PDXDC2PQ6P474 469 aa32.49■■■□□ 2.79
VEGFA-211ENST00000476772 PLIN2Q99541 437 aa32.49■■■□□ 2.79
VEGFA-211ENST00000476772 RBSNQ9H1K0 784 aa32.49■■■□□ 2.79
VEGFA-211ENST00000476772 UBIAD1Q9Y5Z9 338 aa32.49■■■□□ 2.79
VEGFA-211ENST00000476772 PFASO15067 1338 aa32.49■■■□□ 2.79
VEGFA-211ENST00000476772 PRR29P0C7W0 189 aa32.48■■■□□ 2.79
VEGFA-211ENST00000476772 ARP10275 920 aa32.48■■■□□ 2.79
VEGFA-211ENST00000476772 COPB2P35606 906 aa32.48■■■□□ 2.79
VEGFA-211ENST00000476772 SPIRE1Q08AE8 756 aa32.47■■■□□ 2.79
VEGFA-211ENST00000476772 NAALADL2Q58DX5 795 aa32.47■■■□□ 2.79
VEGFA-211ENST00000476772 SH3RF1Q7Z6J0 888 aa32.47■■■□□ 2.79
VEGFA-211ENST00000476772 NSUN6Q8TEA1 469 aaKnown RBP32.47■■■□□ 2.79
VEGFA-211ENST00000476772 SNX29Q8TEQ0 813 aa32.47■■■□□ 2.79
VEGFA-211ENST00000476772 PAGE5Q96GU1 130 aa32.47■■■□□ 2.79
VEGFA-211ENST00000476772 TLL2Q9Y6L7 1015 aa32.47■■■□□ 2.79
VEGFA-211ENST00000476772 TESPA1A2RU30 521 aaPredicted RBP32.46■■■□□ 2.79
VEGFA-211ENST00000476772 PLCG1P19174 1290 aa32.46■■■□□ 2.79
VEGFA-211ENST00000476772 KRT79Q5XKE5 535 aa32.46■■■□□ 2.79
VEGFA-211ENST00000476772 NIPA1Q7RTP0 329 aa32.46■■■□□ 2.79
VEGFA-211ENST00000476772 LRRC15Q8TF66 581 aa32.46■■■□□ 2.79
VEGFA-211ENST00000476772 SLC5A5Q92911 643 aa32.46■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms