RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 CCDC162PA2VCL2 907 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 PABPN1LA6NDY0 278 aaKnown RBP4.56□□□□□ -1.68
CD55-208ENST00000476590 SRRM3A6NNA2 597 aaPredicted RBP4.56□□□□□ -1.68
CD55-208ENST00000476590 SPDYE16A6NNV3 312 aaPredicted RBP4.56□□□□□ -1.68
CD55-208ENST00000476590 GOLGA8KD6RF30 607 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 P4HBP07237 508 aaKnown RBP4.56□□□□□ -1.68
CD55-208ENST00000476590 SFPQP23246 707 aaKnown RBP eCLIP4.56□□□□□ -1.68
CD55-208ENST00000476590 NFKBIAP25963 317 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 CDC25CP30307 473 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 STAT6P42226 847 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 CCNG1P51959 295 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 MTTPP55157 894 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 USP46P62068 366 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 ELF3P78545 371 aaPredicted RBP4.56□□□□□ -1.68
CD55-208ENST00000476590 PDE1BQ01064 536 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 WASHC5Q12768 1159 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 ADAM9Q13443 819 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 ECM1Q16610 540 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 CRTC2Q53ET0 693 aaPredicted RBP4.56□□□□□ -1.68
CD55-208ENST00000476590 LACTB2Q53H82 288 aaPredicted RBP4.56□□□□□ -1.68
CD55-208ENST00000476590 EAPPQ56P03 285 aaPredicted RBP4.56□□□□□ -1.68
CD55-208ENST00000476590 CCDC122Q5T0U0 273 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 EFCAB2Q5VUJ9 269 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 NAA35Q5VZE5 725 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 MSL1Q68DK7 614 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 NEPROQ6NW34 567 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 SLC2A7Q6PXP3 512 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 C6orf89Q6UWU4 347 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 MCF2L2Q86YR7 1114 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 ARHGAP18Q8N392 663 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 SUN5Q8TC36 379 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 ARMC5Q96C12 935 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 SYTL4Q96C24 671 aaPredicted RBP4.56□□□□□ -1.68
CD55-208ENST00000476590 RNPC3Q96LT9 517 aaKnown RBP4.56□□□□□ -1.68
CD55-208ENST00000476590 AVENQ9NQS1 362 aaPredicted RBP4.56□□□□□ -1.68
CD55-208ENST00000476590 INIPQ9NRY2 104 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 SEPT10Q9P0V9 454 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 INTUQ9ULD6 942 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 HPCAL4Q9UM19 191 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 USP16Q9Y5T5 823 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 MROH2BQ7Z745 1585 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 CCDC141Q6ZP82 1450 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 MBD5Q9P267 1494 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 KIF24Q5T7B8 1368 aa4.56□□□□□ -1.68
CD55-208ENST00000476590 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 LINC00854A0A1B0GVQ3 168 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 PIK3CDO00329 1044 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 CYTH3O43739 400 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 SGTAO43765 313 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 DIAPH2O60879 1101 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 CLASP2O75122 1294 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 MTA2O94776 668 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 ALDH1A1P00352 501 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 SKIP12755 728 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 SCG2P13521 617 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 CCNCP24863 283 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 GEMIN4P57678 1058 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 STIM1Q13586 685 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 BYSLQ13895 437 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 SIM2Q14190 667 aaPredicted RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 ELOAQ14241 798 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 RASA2Q15283 850 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 IMMTQ16891 758 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 CMPK2Q5EBM0 449 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 MEX3CQ5U5Q3 659 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 GKAP1Q5VSY0 366 aaPredicted RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 GRAMD4Q6IC98 578 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 WDR93Q6P2C0 686 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 RBM43Q6ZSC3 357 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 DAAM2Q86T65 1068 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 FERMT3Q86UX7 667 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 RAB11FIP4Q86YS3 637 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 THEMISQ8N1K5 641 aaPredicted RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 PGBD3Q8N328 593 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 RNF10Q8N5U6 811 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 CNBD1Q8NA66 436 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 ZNF473Q8WTR7 871 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.55□□□□□ -1.68
CD55-208ENST00000476590 ASB16Q96NS5 453 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 PNKPQ96T60 521 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 NAP1L4Q99733 375 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 FAM126AQ9BYI3 521 aaPredicted RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 SRCIN1Q9C0H9 1055 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 DRC3Q9H069 523 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 SIL1Q9H173 461 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 VCXQ9H320 206 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 SUGCTQ9HAC7 445 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 CLK4Q9HAZ1 481 aaKnown RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 CASS4Q9NQ75 786 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 ZNF180Q9UJW8 692 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 MAFFQ9ULX9 164 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 ZNF652Q9Y2D9 606 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 PCDHGB7Q9Y5F8 929 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 NDUFB9Q9Y6M9 179 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 IFRD1O00458 451 aaPredicted RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 CUTAO60888 179 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 B3GALNT1O75752 331 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 BPNT1O95861 308 aa4.55□□□□□ -1.68
CD55-208ENST00000476590 FOSP01100 380 aaPredicted RBP4.55□□□□□ -1.68
CD55-208ENST00000476590 GSTA2P09210 222 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms