RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 AFAP1L1Q8TED9 768 aa13□□□□□ -0.33
EXOSC1-208ENST00000476234 TMEM47Q9BQJ4 181 aa13□□□□□ -0.33
EXOSC1-208ENST00000476234 FTOQ9C0B1 505 aaKnown RBP eCLIP13□□□□□ -0.33
EXOSC1-208ENST00000476234 CD320Q9NPF0 282 aa13□□□□□ -0.33
EXOSC1-208ENST00000476234 PNMA2Q9UL42 364 aa13□□□□□ -0.33
EXOSC1-208ENST00000476234 TET1Q8NFU7 2136 aa13□□□□□ -0.33
EXOSC1-208ENST00000476234 LAMA4Q16363 1823 aa12.99□□□□□ -0.33
EXOSC1-208ENST00000476234 WDR19Q8NEZ3 1342 aa12.99□□□□□ -0.33
EXOSC1-208ENST00000476234 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.99□□□□□ -0.33
EXOSC1-208ENST00000476234 CXCL10P02778 98 aa12.99□□□□□ -0.33
EXOSC1-208ENST00000476234 SLC16A2P36021 539 aa12.99□□□□□ -0.33
EXOSC1-208ENST00000476234 WDR5P61964 334 aaKnown RBP12.99□□□□□ -0.33
EXOSC1-208ENST00000476234 PPP2R5BQ15173 497 aa12.99□□□□□ -0.33
EXOSC1-208ENST00000476234 CCDC62Q6P9F0 684 aa12.99□□□□□ -0.33
EXOSC1-208ENST00000476234 RNF207Q6ZRF8 634 aa12.99□□□□□ -0.33
EXOSC1-208ENST00000476234 DNERQ8NFT8 737 aa12.99□□□□□ -0.33
EXOSC1-208ENST00000476234 CAGE1Q8TC20 777 aa12.99□□□□□ -0.33
EXOSC1-208ENST00000476234 ZKSCAN3Q9BRR0 538 aa12.99□□□□□ -0.33
EXOSC1-208ENST00000476234 TOMM22Q9NS69 142 aa12.99□□□□□ -0.33
EXOSC1-208ENST00000476234 TCP11L1Q9NUJ3 509 aa12.99□□□□□ -0.33
EXOSC1-208ENST00000476234 FRMPD2Q68DX3 1309 aaPredicted RBP12.98□□□□□ -0.33
EXOSC1-208ENST00000476234 PTPDC1A2A3K4 754 aa12.98□□□□□ -0.33
EXOSC1-208ENST00000476234 LCHNA4D1U4 455 aa12.98□□□□□ -0.33
EXOSC1-208ENST00000476234 PARNO95453 639 aaKnown RBP12.98□□□□□ -0.33
EXOSC1-208ENST00000476234 ERVK-21P61565 698 aa12.98□□□□□ -0.33
EXOSC1-208ENST00000476234 RPS6P62753 249 aaKnown RBP12.98□□□□□ -0.33
EXOSC1-208ENST00000476234 PDE4DQ08499 809 aa12.98□□□□□ -0.33
EXOSC1-208ENST00000476234 CCDC96Q2M329 555 aa12.98□□□□□ -0.33
EXOSC1-208ENST00000476234 TTC22Q5TAA0 569 aa12.98□□□□□ -0.33
EXOSC1-208ENST00000476234 RGS22Q8NE09 1264 aa12.98□□□□□ -0.33
EXOSC1-208ENST00000476234 PPP1R13LQ8WUF5 828 aa12.98□□□□□ -0.33
EXOSC1-208ENST00000476234 COPS5Q92905 334 aa12.98□□□□□ -0.33
EXOSC1-208ENST00000476234 ARIH2O95376 493 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 TXNP10599 105 aaKnown RBP12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 PDHBP11177 359 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 TOP1P11387 765 aaKnown RBP12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 SELPP16109 830 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 CALML3P27482 149 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 KCNJ6P48051 423 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 PTGISQ16647 500 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 MFSD6Q6ZSS7 791 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 SKAP1Q86WV1 359 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 CCDC155Q8N6L0 562 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 DHX38Q92620 1227 aaKnown RBP12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 KAT2BQ92831 832 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 MPHOSPH6Q99547 160 aaKnown RBP12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 MAF1Q9H063 256 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 CPVLQ9H3G5 476 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 SUGCTQ9HAC7 445 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 GPCPD1Q9NPB8 672 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 DIAPH3Q9NSV4 1193 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 FARP1Q9Y4F1 1045 aaPredicted RBP12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 TAF6LQ9Y6J9 622 aa12.97□□□□□ -0.33
EXOSC1-208ENST00000476234 ABHD14A-ACY1A0A1B0GW23 586 aa12.96□□□□□ -0.33
EXOSC1-208ENST00000476234 NBNO60934 754 aa12.96□□□□□ -0.33
EXOSC1-208ENST00000476234 GJB5O95377 273 aa12.96□□□□□ -0.33
EXOSC1-208ENST00000476234 SNHG28P0DPA3 235 aa12.96□□□□□ -0.33
EXOSC1-208ENST00000476234 DEFB103AP81534 67 aa12.96□□□□□ -0.33
EXOSC1-208ENST00000476234 TCTN1Q2MV58 587 aa12.96□□□□□ -0.33
EXOSC1-208ENST00000476234 LEXMQ3ZCV2 418 aa12.96□□□□□ -0.33
EXOSC1-208ENST00000476234 GDF6Q6KF10 455 aaPredicted RBP12.96□□□□□ -0.33
EXOSC1-208ENST00000476234 CNKSR3Q6P9H4 555 aa12.96□□□□□ -0.33
EXOSC1-208ENST00000476234 TRAF7Q6Q0C0 670 aa12.96□□□□□ -0.33
EXOSC1-208ENST00000476234 LRRC8DQ7L1W4 858 aa12.96□□□□□ -0.33
EXOSC1-208ENST00000476234 RAD9AQ99638 391 aa12.96□□□□□ -0.33
EXOSC1-208ENST00000476234 NOD1Q9Y239 953 aa12.96□□□□□ -0.33
EXOSC1-208ENST00000476234 LINC01553A4QN01 128 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 B4DLN1 442 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 B4E1Z4 1266 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 ZNF213O14771 459 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 KDM4AO75164 1064 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 GOLGA8HP0CJ92 632 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 MRPL12P52815 198 aaKnown RBP12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 PTH1RQ03431 593 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 ARHGAP1Q07960 439 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 ZNF543Q08ER8 600 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 TMCO2Q7Z6W1 182 aaPredicted RBP12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 FAM178BQ8IXR5 827 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 GDPD5Q8WTR4 605 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 AFG1LQ8WV93 481 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 TGS1Q96RS0 853 aaKnown RBP12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 DSCC1Q9BVC3 393 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 UBE2ZQ9H832 354 aaPredicted RBP12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 ZSWIM5Q9P217 1185 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 BRWD1Q9NSI6 2320 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 PIEZO1Q92508 2521 aa12.95□□□□□ -0.34
EXOSC1-208ENST00000476234 TRIP12Q14669 1992 aaPredicted RBP12.94□□□□□ -0.34
EXOSC1-208ENST00000476234 FAM86C2PA6NEL3 165 aa12.94□□□□□ -0.34
EXOSC1-208ENST00000476234 PRR33A8MZF0 331 aa12.94□□□□□ -0.34
EXOSC1-208ENST00000476234 EFCAB14O75071 495 aa12.94□□□□□ -0.34
EXOSC1-208ENST00000476234 MMP3P08254 477 aa12.94□□□□□ -0.34
EXOSC1-208ENST00000476234 CKBP12277 381 aa12.94□□□□□ -0.34
EXOSC1-208ENST00000476234 CHMLP26374 656 aa12.94□□□□□ -0.34
EXOSC1-208ENST00000476234 TRIM71Q2Q1W2 868 aaKnown RBP12.94□□□□□ -0.34
EXOSC1-208ENST00000476234 CENPQQ7L2Z9 268 aaPredicted RBP12.94□□□□□ -0.34
EXOSC1-208ENST00000476234 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.94□□□□□ -0.34
EXOSC1-208ENST00000476234 TTC14Q96N46 770 aa12.94□□□□□ -0.34
EXOSC1-208ENST00000476234 GTF2IRD1Q9UHL9 959 aa12.94□□□□□ -0.34
EXOSC1-208ENST00000476234 SIP14410 1827 aa12.94□□□□□ -0.34
EXOSC1-208ENST00000476234 HAS3O00219 553 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms