RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 CYP39A1Q9NYL5 469 aa12.37□□□□□ -0.43
CALD1-217ENST00000475772 TCF20Q9UGU0 1960 aaKnown RBP12.36□□□□□ -0.43
CALD1-217ENST00000475772 TLR3O15455 904 aaKnown RBP12.36□□□□□ -0.43
CALD1-217ENST00000475772 B4GALT4O60513 344 aa12.36□□□□□ -0.43
CALD1-217ENST00000475772 FGRP09769 529 aa12.36□□□□□ -0.43
CALD1-217ENST00000475772 PSMC6P62333 389 aa12.36□□□□□ -0.43
CALD1-217ENST00000475772 FSCN1Q16658 493 aaKnown RBP12.36□□□□□ -0.43
CALD1-217ENST00000475772 VPS53Q5VIR6 699 aa12.36□□□□□ -0.43
CALD1-217ENST00000475772 IQSEC1Q6DN90 963 aa12.36□□□□□ -0.43
CALD1-217ENST00000475772 CCDC174Q6PII3 467 aa12.36□□□□□ -0.43
CALD1-217ENST00000475772 BRICD5Q6PL45 260 aa12.36□□□□□ -0.43
CALD1-217ENST00000475772 RNF19BQ6ZMZ0 732 aa12.36□□□□□ -0.43
CALD1-217ENST00000475772 TLK2Q86UE8 772 aa12.36□□□□□ -0.43
CALD1-217ENST00000475772 GPATCH3Q96I76 525 aa12.36□□□□□ -0.43
CALD1-217ENST00000475772 NACAP1Q9BZK3 213 aa12.36□□□□□ -0.43
CALD1-217ENST00000475772 TRPV6Q9H1D0 765 aa12.36□□□□□ -0.43
CALD1-217ENST00000475772 WNT8AQ9H1J5 351 aa12.36□□□□□ -0.43
CALD1-217ENST00000475772 PCDHGC3Q9UN70 934 aa12.36□□□□□ -0.43
CALD1-217ENST00000475772 YBX2Q9Y2T7 364 aaKnown RBP12.36□□□□□ -0.43
CALD1-217ENST00000475772 Q9Y3F1 56 aa12.36□□□□□ -0.43
CALD1-217ENST00000475772 PRRC2BQ5JSZ5 2229 aaKnown RBP12.35□□□□□ -0.43
CALD1-217ENST00000475772 CABYRO75952 493 aa12.35□□□□□ -0.43
CALD1-217ENST00000475772 ADH1BP00325 375 aa12.35□□□□□ -0.43
CALD1-217ENST00000475772 FGBP02675 491 aa12.35□□□□□ -0.43
CALD1-217ENST00000475772 CCL23P55773 120 aa12.35□□□□□ -0.43
CALD1-217ENST00000475772 MYSM1Q5VVJ2 828 aa12.35□□□□□ -0.43
CALD1-217ENST00000475772 PSRC1Q6PGN9 363 aaPredicted RBP12.35□□□□□ -0.43
CALD1-217ENST00000475772 NOL8Q76FK4 1167 aaKnown RBP12.35□□□□□ -0.43
CALD1-217ENST00000475772 FBXO16Q8IX29 292 aaPredicted RBP12.35□□□□□ -0.43
CALD1-217ENST00000475772 FSD1Q9BTV5 496 aa12.35□□□□□ -0.43
CALD1-217ENST00000475772 NOC4LQ9BVI4 516 aaKnown RBP12.35□□□□□ -0.43
CALD1-217ENST00000475772 ANAPC4Q9UJX5 808 aa12.35□□□□□ -0.43
CALD1-217ENST00000475772 STX8Q9UNK0 236 aa12.35□□□□□ -0.43
CALD1-217ENST00000475772 SCN10AQ9Y5Y9 1956 aa12.35□□□□□ -0.43
CALD1-217ENST00000475772 XIRP2A4UGR9 3374 aa12.34□□□□□ -0.43
CALD1-217ENST00000475772 TSPY2A6NKD2 308 aa12.34□□□□□ -0.43
CALD1-217ENST00000475772 ERC2O15083 957 aa12.34□□□□□ -0.43
CALD1-217ENST00000475772 SLC3A2P08195 630 aaKnown RBP12.34□□□□□ -0.43
CALD1-217ENST00000475772 SLC16A2P36021 539 aa12.34□□□□□ -0.43
CALD1-217ENST00000475772 BAATQ14032 418 aaPredicted RBP12.34□□□□□ -0.43
CALD1-217ENST00000475772 BTNL9Q6UXG8 535 aa12.34□□□□□ -0.43
CALD1-217ENST00000475772 KIAA1211Q6ZU35 1233 aa12.34□□□□□ -0.43
CALD1-217ENST00000475772 OTOP2Q7RTS6 562 aa12.34□□□□□ -0.43
CALD1-217ENST00000475772 PPM1EQ8WY54 764 aa12.34□□□□□ -0.43
CALD1-217ENST00000475772 SYMPKQ92797 1274 aaKnown RBP12.34□□□□□ -0.43
CALD1-217ENST00000475772 SPSB2Q99619 263 aa12.34□□□□□ -0.43
CALD1-217ENST00000475772 RANBP17Q9H2T7 1088 aaKnown RBP12.34□□□□□ -0.43
CALD1-217ENST00000475772 NKX2-4Q9H2Z4 354 aa12.34□□□□□ -0.43
CALD1-217ENST00000475772 HIPK3Q9H422 1215 aa12.34□□□□□ -0.43
CALD1-217ENST00000475772 RBM47A0AV96 593 aaKnown RBP12.33□□□□□ -0.44
CALD1-217ENST00000475772 NFIBO00712 420 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 SPTLC1O15269 473 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 ORC4O43929 436 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 ICAM1P05362 532 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 MYOGP15173 224 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 RABGGTBP53611 331 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 IKQ13123 557 aaPredicted RBP12.33□□□□□ -0.44
CALD1-217ENST00000475772 ALX1Q15699 326 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 LRRFIP1Q32MZ4 808 aaKnown RBP12.33□□□□□ -0.44
CALD1-217ENST00000475772 DUSP28Q4G0W2 176 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 AKNAD1Q5T1N1 836 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 NSMFQ6X4W1 530 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 CLEC4DQ8WXI8 215 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 SCLYQ96I15 445 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 AP5M1Q9H0R1 490 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 VTA1Q9NP79 307 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 CCPG1Q9ULG6 757 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 ISY1Q9ULR0 285 aaKnown RBP12.33□□□□□ -0.44
CALD1-217ENST00000475772 MTMR7Q9Y216 660 aa12.33□□□□□ -0.44
CALD1-217ENST00000475772 RANBP6O60518 1105 aaKnown RBP12.32□□□□□ -0.44
CALD1-217ENST00000475772 FGAP02671 866 aa12.32□□□□□ -0.44
CALD1-217ENST00000475772 MX1P20591 662 aa12.32□□□□□ -0.44
CALD1-217ENST00000475772 ALDH5A1P51649 535 aaPredicted RBP12.32□□□□□ -0.44
CALD1-217ENST00000475772 CCDC85BQ15834 202 aaPredicted RBP12.32□□□□□ -0.44
CALD1-217ENST00000475772 PPP1R13LQ8WUF5 828 aa12.32□□□□□ -0.44
CALD1-217ENST00000475772 DCAF4Q8WV16 495 aa12.32□□□□□ -0.44
CALD1-217ENST00000475772 GAS2L1Q99501 681 aaPredicted RBP12.32□□□□□ -0.44
CALD1-217ENST00000475772 TMEM47Q9BQJ4 181 aa12.32□□□□□ -0.44
CALD1-217ENST00000475772 SEZ6LQ9BYH1 1024 aa12.32□□□□□ -0.44
CALD1-217ENST00000475772 ALDH8A1Q9H2A2 487 aaPredicted RBP12.32□□□□□ -0.44
CALD1-217ENST00000475772 TRMT13Q9NUP7 481 aaKnown RBP12.32□□□□□ -0.44
CALD1-217ENST00000475772 MSRAQ9UJ68 235 aa12.32□□□□□ -0.44
CALD1-217ENST00000475772 TRANK1O15050 2925 aa12.31□□□□□ -0.44
CALD1-217ENST00000475772 ZEB2O60315 1214 aa12.31□□□□□ -0.44
CALD1-217ENST00000475772 CYP2C9P11712 490 aa12.31□□□□□ -0.44
CALD1-217ENST00000475772 PURAQ00577 322 aaKnown RBP12.31□□□□□ -0.44
CALD1-217ENST00000475772 RAB30Q15771 203 aa12.31□□□□□ -0.44
CALD1-217ENST00000475772 PPP1R18Q6NYC8 613 aa12.31□□□□□ -0.44
CALD1-217ENST00000475772 FAM160A2Q8N612 972 aaPredicted RBP12.31□□□□□ -0.44
CALD1-217ENST00000475772 ATXN2LQ8WWM7 1075 aaKnown RBP12.31□□□□□ -0.44
CALD1-217ENST00000475772 FAM227BQ96M60 508 aa12.31□□□□□ -0.44
CALD1-217ENST00000475772 WDR11Q9BZH6 1224 aa12.31□□□□□ -0.44
CALD1-217ENST00000475772 TCP11L1Q9NUJ3 509 aa12.31□□□□□ -0.44
CALD1-217ENST00000475772 FRMPD2Q68DX3 1309 aaPredicted RBP12.31□□□□□ -0.44
CALD1-217ENST00000475772 RBAK-RBAKDNI3L0D1 243 aa12.3□□□□□ -0.44
CALD1-217ENST00000475772 TNFRSF10AO00220 468 aa12.3□□□□□ -0.44
CALD1-217ENST00000475772 TTLL4Q14679 1199 aa12.3□□□□□ -0.44
CALD1-217ENST00000475772 SYDE2Q5VT97 1194 aa12.3□□□□□ -0.44
CALD1-217ENST00000475772 SLC30A10Q6XR72 485 aa12.3□□□□□ -0.44
CALD1-217ENST00000475772 COPS5Q92905 334 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms