RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 CTAGE1Q96RT6 745 aa23.95■■□□□ 1.42
VPS36-203ENST00000475375 ALG1Q9BT22 464 aa23.95■■□□□ 1.42
VPS36-203ENST00000475375 ABCB11O95342 1321 aa23.94■■□□□ 1.42
VPS36-203ENST00000475375 PCP11498 1178 aaKnown RBP23.94■■□□□ 1.42
VPS36-203ENST00000475375 CKBP12277 381 aa23.94■■□□□ 1.42
VPS36-203ENST00000475375 GPNMBQ14956 572 aa23.94■■□□□ 1.42
VPS36-203ENST00000475375 FAM117BQ6P1L5 589 aa23.94■■□□□ 1.42
VPS36-203ENST00000475375 ZNF589Q86UQ0 364 aaPredicted RBP23.94■■□□□ 1.42
VPS36-203ENST00000475375 TBC1D10CQ8IV04 446 aa23.94■■□□□ 1.42
VPS36-203ENST00000475375 SYTL5Q8TDW5 730 aaPredicted RBP23.94■■□□□ 1.42
VPS36-203ENST00000475375 ESR2Q92731 530 aa23.94■■□□□ 1.42
VPS36-203ENST00000475375 TGS1Q96RS0 853 aaKnown RBP23.94■■□□□ 1.42
VPS36-203ENST00000475375 RMDN3Q96TC7 470 aa23.94■■□□□ 1.42
VPS36-203ENST00000475375 RAD9AQ99638 391 aa23.94■■□□□ 1.42
VPS36-203ENST00000475375 RNF41Q9H4P4 317 aaPredicted RBP23.94■■□□□ 1.42
VPS36-203ENST00000475375 LMCD1Q9NZU5 365 aa23.94■■□□□ 1.42
VPS36-203ENST00000475375 HDAC6Q9UBN7 1215 aa23.94■■□□□ 1.42
VPS36-203ENST00000475375 GTF2IRD1Q9UHL9 959 aa23.94■■□□□ 1.42
VPS36-203ENST00000475375 COL4A4P53420 1690 aaPredicted RBP23.94■■□□□ 1.42
VPS36-203ENST00000475375 ZMYM6O95789 1325 aa23.93■■□□□ 1.42
VPS36-203ENST00000475375 DHX16O60231 1041 aaKnown RBP23.93■■□□□ 1.42
VPS36-203ENST00000475375 NBNO60934 754 aa23.93■■□□□ 1.42
VPS36-203ENST00000475375 NMIQ13287 307 aaPredicted RBP23.93■■□□□ 1.42
VPS36-203ENST00000475375 ARHGEF16Q5VV41 709 aa23.93■■□□□ 1.42
VPS36-203ENST00000475375 MCF2L2Q86YR7 1114 aa23.93■■□□□ 1.42
VPS36-203ENST00000475375 ABHD14A-ACY1A0A1B0GW23 586 aa23.92■■□□□ 1.42
VPS36-203ENST00000475375 FAM86C2PA6NEL3 165 aa23.92■■□□□ 1.42
VPS36-203ENST00000475375 GJB5O95377 273 aa23.92■■□□□ 1.42
VPS36-203ENST00000475375 PSEN2P49810 448 aa23.92■■□□□ 1.42
VPS36-203ENST00000475375 PDE1AP54750 535 aa23.92■■□□□ 1.42
VPS36-203ENST00000475375 IKBKEQ14164 716 aa23.92■■□□□ 1.42
VPS36-203ENST00000475375 IWS1Q96ST2 819 aa23.92■■□□□ 1.42
VPS36-203ENST00000475375 KATNAL1Q9BW62 490 aa23.92■■□□□ 1.42
VPS36-203ENST00000475375 COL20A1Q9P218 1284 aa23.92■■□□□ 1.42
VPS36-203ENST00000475375 NEDD4P46934 1319 aa23.91■■□□□ 1.42
VPS36-203ENST00000475375 CCDC171Q6TFL3 1326 aa23.91■■□□□ 1.42
VPS36-203ENST00000475375 PTPRSQ13332 1948 aa23.91■■□□□ 1.42
VPS36-203ENST00000475375 TRIM6-TRIM34B2RNG4 842 aa23.91■■□□□ 1.42
VPS36-203ENST00000475375 EFCAB14O75071 495 aa23.91■■□□□ 1.42
VPS36-203ENST00000475375 CXCL10P02778 98 aa23.91■■□□□ 1.42
VPS36-203ENST00000475375 ZNF286BP0CG31 522 aa23.91■■□□□ 1.42
VPS36-203ENST00000475375 EIF2AK2P19525 551 aaKnown RBP23.91■■□□□ 1.42
VPS36-203ENST00000475375 RBL2Q08999 1139 aa23.91■■□□□ 1.42
VPS36-203ENST00000475375 MFSD10Q14728 455 aa23.91■■□□□ 1.42
VPS36-203ENST00000475375 TCTN1Q2MV58 587 aa23.91■■□□□ 1.42
VPS36-203ENST00000475375 ADGRF4Q8IZF3 695 aa23.91■■□□□ 1.42
VPS36-203ENST00000475375 PNMA1Q8ND90 353 aa23.91■■□□□ 1.42
VPS36-203ENST00000475375 KAT14Q9H8E8 782 aa23.91■■□□□ 1.42
VPS36-203ENST00000475375 SUGCTQ9HAC7 445 aa23.91■■□□□ 1.42
VPS36-203ENST00000475375 MRVI1Q9Y6F6 885 aa23.91■■□□□ 1.42
VPS36-203ENST00000475375 LINC01553A4QN01 128 aa23.9■■□□□ 1.42
VPS36-203ENST00000475375 ERVK-21P61565 698 aa23.9■■□□□ 1.42
VPS36-203ENST00000475375 PTK7Q13308 1070 aa23.9■■□□□ 1.42
VPS36-203ENST00000475375 KIAA0753Q2KHM9 967 aa23.9■■□□□ 1.42
VPS36-203ENST00000475375 DGKHQ86XP1 1220 aa23.9■■□□□ 1.42
VPS36-203ENST00000475375 KHSRPQ92945 711 aaKnown RBP eCLIP23.9■■□□□ 1.42
VPS36-203ENST00000475375 MAF1Q9H063 256 aa23.9■■□□□ 1.42
VPS36-203ENST00000475375 UBE2ZQ9H832 354 aaPredicted RBP23.9■■□□□ 1.42
VPS36-203ENST00000475375 DDX41Q9UJV9 622 aaKnown RBP23.9■■□□□ 1.42
VPS36-203ENST00000475375 MRPL11Q9Y3B7 192 aaKnown RBP23.9■■□□□ 1.42
VPS36-203ENST00000475375 HOXD11P31277 338 aaPredicted RBP23.89■■□□□ 1.41
VPS36-203ENST00000475375 LAMC2Q13753 1193 aa23.89■■□□□ 1.41
VPS36-203ENST00000475375 ZNF618Q5T7W0 954 aa23.89■■□□□ 1.41
VPS36-203ENST00000475375 IQCA1Q86XH1 822 aa23.89■■□□□ 1.41
VPS36-203ENST00000475375 FBXO11Q86XK2 927 aa23.89■■□□□ 1.41
VPS36-203ENST00000475375 DHX37Q8IY37 1157 aaKnown RBP23.89■■□□□ 1.41
VPS36-203ENST00000475375 RILPL2Q969X0 211 aa23.89■■□□□ 1.41
VPS36-203ENST00000475375 VAT1LQ9HCJ6 419 aa23.89■■□□□ 1.41
VPS36-203ENST00000475375 ARIH1Q9Y4X5 557 aaPredicted RBP23.89■■□□□ 1.41
VPS36-203ENST00000475375 BRWD1Q9NSI6 2320 aa23.89■■□□□ 1.41
VPS36-203ENST00000475375 ZNF213O14771 459 aa23.88■■□□□ 1.41
VPS36-203ENST00000475375 EIF3JO75822 258 aaKnown RBP23.88■■□□□ 1.41
VPS36-203ENST00000475375 MFAP1P55081 439 aaKnown RBP23.88■■□□□ 1.41
VPS36-203ENST00000475375 QRICH1Q2TAL8 776 aa23.88■■□□□ 1.41
VPS36-203ENST00000475375 CCDC178Q5BJE1 867 aa23.88■■□□□ 1.41
VPS36-203ENST00000475375 PPTC7Q8NI37 304 aa23.88■■□□□ 1.41
VPS36-203ENST00000475375 RBAK-RBAKDNI3L0D1 243 aa23.87■■□□□ 1.41
VPS36-203ENST00000475375 SORBS3O60504 671 aa23.87■■□□□ 1.41
VPS36-203ENST00000475375 GPR37L1O60883 481 aa23.87■■□□□ 1.41
VPS36-203ENST00000475375 KDM4AO75164 1064 aa23.87■■□□□ 1.41
VPS36-203ENST00000475375 F2P00734 622 aa23.87■■□□□ 1.41
VPS36-203ENST00000475375 CFBP00751 764 aa23.87■■□□□ 1.41
VPS36-203ENST00000475375 NR3C2P08235 984 aa23.87■■□□□ 1.41
VPS36-203ENST00000475375 KCNA5P22460 613 aa23.87■■□□□ 1.41
VPS36-203ENST00000475375 ZNF200P98182 395 aaPredicted RBP23.87■■□□□ 1.41
VPS36-203ENST00000475375 ASPRV1Q53RT3 343 aa23.87■■□□□ 1.41
VPS36-203ENST00000475375 FBXO22Q8NEZ5 403 aa23.87■■□□□ 1.41
VPS36-203ENST00000475375 EMID1Q96A84 441 aaPredicted RBP23.87■■□□□ 1.41
VPS36-203ENST00000475375 PXMP2Q9NR77 195 aa23.87■■□□□ 1.41
VPS36-203ENST00000475375 TICAM2Q86XR7 235 aa23.86■■□□□ 1.41
VPS36-203ENST00000475375 WNT8BQ93098 351 aa23.86■■□□□ 1.41
VPS36-203ENST00000475375 CD320Q9NPF0 282 aa23.86■■□□□ 1.41
VPS36-203ENST00000475375 INSL6Q9Y581 213 aa23.86■■□□□ 1.41
VPS36-203ENST00000475375 LGR5O75473 907 aa23.85■■□□□ 1.41
VPS36-203ENST00000475375 AMHP03971 560 aa23.85■■□□□ 1.41
VPS36-203ENST00000475375 PARP1P09874 1014 aaKnown RBP23.85■■□□□ 1.41
VPS36-203ENST00000475375 MYCLP12524 364 aaPredicted RBP23.85■■□□□ 1.41
VPS36-203ENST00000475375 SSTR3P32745 418 aaPredicted RBP23.85■■□□□ 1.41
VPS36-203ENST00000475375 TRIM71Q2Q1W2 868 aaKnown RBP23.85■■□□□ 1.41
VPS36-203ENST00000475375 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms