RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 DGKDQ16760 1214 aa20.83■□□□□ 0.93
PCGF3-209ENST00000475288 LRRC8DQ7L1W4 858 aa20.83■□□□□ 0.93
PCGF3-209ENST00000475288 TBC1D5Q92609 795 aa20.83■□□□□ 0.93
PCGF3-209ENST00000475288 KATNAL1Q9BW62 490 aa20.83■□□□□ 0.93
PCGF3-209ENST00000475288 CPVLQ9H3G5 476 aa20.83■□□□□ 0.93
PCGF3-209ENST00000475288 OSBPL3Q9H4L5 887 aa20.83■□□□□ 0.93
PCGF3-209ENST00000475288 KAT14Q9H8E8 782 aa20.83■□□□□ 0.93
PCGF3-209ENST00000475288 GTF2IRD1Q9UHL9 959 aa20.83■□□□□ 0.93
PCGF3-209ENST00000475288 DDX41Q9UJV9 622 aaKnown RBP20.83■□□□□ 0.93
PCGF3-209ENST00000475288 TRIP12Q14669 1992 aaPredicted RBP20.83■□□□□ 0.92
PCGF3-209ENST00000475288 RFXAPO00287 272 aa20.82■□□□□ 0.92
PCGF3-209ENST00000475288 KDM4AO75164 1064 aa20.82■□□□□ 0.92
PCGF3-209ENST00000475288 EIF3JO75822 258 aaKnown RBP20.82■□□□□ 0.92
PCGF3-209ENST00000475288 ARHGEF15O94989 841 aa20.82■□□□□ 0.92
PCGF3-209ENST00000475288 WDR5P61964 334 aaKnown RBP20.82■□□□□ 0.92
PCGF3-209ENST00000475288 GPNMBQ14956 572 aa20.82■□□□□ 0.92
PCGF3-209ENST00000475288 LY6KQ17RY6 165 aa20.82■□□□□ 0.92
PCGF3-209ENST00000475288 CNKSR3Q6P9H4 555 aa20.82■□□□□ 0.92
PCGF3-209ENST00000475288 SEPT14Q6ZU15 432 aa20.82■□□□□ 0.92
PCGF3-209ENST00000475288 SMC5Q8IY18 1101 aa20.82■□□□□ 0.92
PCGF3-209ENST00000475288 PPP1R13LQ8WUF5 828 aa20.82■□□□□ 0.92
PCGF3-209ENST00000475288 ARNTL2Q8WYA1 636 aa20.82■□□□□ 0.92
PCGF3-209ENST00000475288 RILPL2Q969X0 211 aa20.82■□□□□ 0.92
PCGF3-209ENST00000475288 ZSCAN10Q96SZ4 725 aaPredicted RBP20.82■□□□□ 0.92
PCGF3-209ENST00000475288 LNPKQ9C0E8 428 aa20.82■□□□□ 0.92
PCGF3-209ENST00000475288 MAP3K20Q9NYL2 800 aaKnown RBP20.82■□□□□ 0.92
PCGF3-209ENST00000475288 LMCD1Q9NZU5 365 aa20.82■□□□□ 0.92
PCGF3-209ENST00000475288 COL4A4P53420 1690 aaPredicted RBP20.82■□□□□ 0.92
PCGF3-209ENST00000475288 MYH6P13533 1939 aa20.81■□□□□ 0.92
PCGF3-209ENST00000475288 TLL1O43897 1013 aa20.81■□□□□ 0.92
PCGF3-209ENST00000475288 EFCAB14O75071 495 aa20.81■□□□□ 0.92
PCGF3-209ENST00000475288 F2P00734 622 aa20.81■□□□□ 0.92
PCGF3-209ENST00000475288 HOXD8P13378 290 aaPredicted RBP20.81■□□□□ 0.92
PCGF3-209ENST00000475288 LAMC2Q13753 1193 aa20.81■□□□□ 0.92
PCGF3-209ENST00000475288 SKIV2LQ15477 1246 aaKnown RBP20.81■□□□□ 0.92
PCGF3-209ENST00000475288 QRICH1Q2TAL8 776 aa20.81■□□□□ 0.92
PCGF3-209ENST00000475288 FBXO11Q86XK2 927 aa20.81■□□□□ 0.92
PCGF3-209ENST00000475288 ENAHQ8N8S7 591 aaPredicted RBP20.81■□□□□ 0.92
PCGF3-209ENST00000475288 PPTC7Q8NI37 304 aa20.81■□□□□ 0.92
PCGF3-209ENST00000475288 DHX38Q92620 1227 aaKnown RBP20.81■□□□□ 0.92
PCGF3-209ENST00000475288 DSCC1Q9BVC3 393 aa20.81■□□□□ 0.92
PCGF3-209ENST00000475288 C1QTNF1Q9BXJ1 281 aa20.81■□□□□ 0.92
PCGF3-209ENST00000475288 CERS4Q9HA82 394 aa20.81■□□□□ 0.92
PCGF3-209ENST00000475288 ABHD14A-ACY1A0A1B0GW23 586 aa20.8■□□□□ 0.92
PCGF3-209ENST00000475288 HAS3O00219 553 aa20.8■□□□□ 0.92
PCGF3-209ENST00000475288 HIP1O00291 1037 aa20.8■□□□□ 0.92
PCGF3-209ENST00000475288 LPXNO60711 386 aa20.8■□□□□ 0.92
PCGF3-209ENST00000475288 PARP1P09874 1014 aaKnown RBP20.8■□□□□ 0.92
PCGF3-209ENST00000475288 CKBP12277 381 aa20.8■□□□□ 0.92
PCGF3-209ENST00000475288 HSD17B4P51659 736 aa20.8■□□□□ 0.92
PCGF3-209ENST00000475288 ARHGEF16Q5VV41 709 aa20.8■□□□□ 0.92
PCGF3-209ENST00000475288 SAMD3Q8N6K7 520 aa20.8■□□□□ 0.92
PCGF3-209ENST00000475288 JMJD4Q9H9V9 463 aa20.8■□□□□ 0.92
PCGF3-209ENST00000475288 PXMP2Q9NR77 195 aa20.8■□□□□ 0.92
PCGF3-209ENST00000475288 TCF20Q9UGU0 1960 aaKnown RBP20.79■□□□□ 0.92
PCGF3-209ENST00000475288 NR3C2P08235 984 aa20.79■□□□□ 0.92
PCGF3-209ENST00000475288 KCNQ1P51787 676 aa20.79■□□□□ 0.92
PCGF3-209ENST00000475288 PTK7Q13308 1070 aa20.79■□□□□ 0.92
PCGF3-209ENST00000475288 GRB10Q13322 594 aa20.79■□□□□ 0.92
PCGF3-209ENST00000475288 KCNV1Q6PIU1 500 aa20.79■□□□□ 0.92
PCGF3-209ENST00000475288 C7orf31Q8N865 590 aa20.79■□□□□ 0.92
PCGF3-209ENST00000475288 HLA-CQ95604 372 aa20.79■□□□□ 0.92
PCGF3-209ENST00000475288 NECAB3Q96P71 396 aaPredicted RBP20.79■□□□□ 0.92
PCGF3-209ENST00000475288 KRT23Q9C075 422 aa20.79■□□□□ 0.92
PCGF3-209ENST00000475288 ZSWIM5Q9P217 1185 aa20.79■□□□□ 0.92
PCGF3-209ENST00000475288 HDAC6Q9UBN7 1215 aa20.79■□□□□ 0.92
PCGF3-209ENST00000475288 B4E1Z4 1266 aa20.78■□□□□ 0.92
PCGF3-209ENST00000475288 NBNO60934 754 aa20.78■□□□□ 0.92
PCGF3-209ENST00000475288 GJB5O95377 273 aa20.78■□□□□ 0.92
PCGF3-209ENST00000475288 PSEN2P49810 448 aa20.78■□□□□ 0.92
PCGF3-209ENST00000475288 IMMTQ16891 758 aaKnown RBP20.78■□□□□ 0.92
PCGF3-209ENST00000475288 PLEKHM2Q8IWE5 1019 aa20.78■□□□□ 0.92
PCGF3-209ENST00000475288 MTMR8Q96EF0 704 aa20.78■□□□□ 0.92
PCGF3-209ENST00000475288 AMNQ9BXJ7 453 aa20.78■□□□□ 0.92
PCGF3-209ENST00000475288 CNNM2Q9H8M5 875 aa20.78■□□□□ 0.92
PCGF3-209ENST00000475288 CTNNA3Q9UI47 895 aa20.78■□□□□ 0.92
PCGF3-209ENST00000475288 MRVI1Q9Y6F6 885 aa20.78■□□□□ 0.92
PCGF3-209ENST00000475288 OPLAHO14841 1288 aa20.77■□□□□ 0.92
PCGF3-209ENST00000475288 PPFIA4O75335 1185 aa20.77■□□□□ 0.92
PCGF3-209ENST00000475288 EIF2AK2P19525 551 aaKnown RBP20.77■□□□□ 0.92
PCGF3-209ENST00000475288 CHMP4BP1P59074 171 aa20.77■□□□□ 0.92
PCGF3-209ENST00000475288 MFSD10Q14728 455 aa20.77■□□□□ 0.92
PCGF3-209ENST00000475288 TRIM71Q2Q1W2 868 aaKnown RBP20.77■□□□□ 0.92
PCGF3-209ENST00000475288 KRT40Q6A162 431 aa20.77■□□□□ 0.92
PCGF3-209ENST00000475288 STOX1Q6ZVD7 989 aa20.77■□□□□ 0.92
PCGF3-209ENST00000475288 CHST3Q7LGC8 479 aa20.77■□□□□ 0.92
PCGF3-209ENST00000475288 CHD1LQ86WJ1 897 aa20.77■□□□□ 0.92
PCGF3-209ENST00000475288 RAD9AQ99638 391 aa20.77■□□□□ 0.92
PCGF3-209ENST00000475288 DIAPH3Q9NSV4 1193 aa20.77■□□□□ 0.92
PCGF3-209ENST00000475288 LCHNA4D1U4 455 aa20.76■□□□□ 0.91
PCGF3-209ENST00000475288 DHX16O60231 1041 aaKnown RBP20.76■□□□□ 0.91
PCGF3-209ENST00000475288 ERVK-21P61565 698 aa20.76■□□□□ 0.91
PCGF3-209ENST00000475288 DEFB103AP81534 67 aa20.76■□□□□ 0.91
PCGF3-209ENST00000475288 KIAA0753Q2KHM9 967 aa20.76■□□□□ 0.91
PCGF3-209ENST00000475288 TRAF7Q6Q0C0 670 aa20.76■□□□□ 0.91
PCGF3-209ENST00000475288 CWC27Q6UX04 472 aaKnown RBP20.76■□□□□ 0.91
PCGF3-209ENST00000475288 DHX37Q8IY37 1157 aaKnown RBP20.76■□□□□ 0.91
PCGF3-209ENST00000475288 PDCD2LQ9BRP1 358 aa20.76■□□□□ 0.91
PCGF3-209ENST00000475288 ZBED2Q9BTP6 218 aa20.76■□□□□ 0.91
PCGF3-209ENST00000475288 RWDD1Q9H446 243 aaPredicted RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms