RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 POTEMA6NI47 508 aa15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 NR1D1P20393 614 aa15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 FAM114A1Q8IWE2 563 aa15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 ZSCAN29Q8IWY8 852 aaPredicted RBP15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 BAP1Q92560 729 aa15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 NOX5Q96PH1 765 aa15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 BTG4Q9NY30 223 aa15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 MAD2L2Q9UI95 211 aa15.16■□□□□ 0.02
SEMA4D-217ENST00000475255 ERVV-1B6SEH8 477 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 IL6STP40189 918 aaPredicted RBP15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 GBP6Q6ZN66 633 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 NOC3LQ8WTT2 800 aaKnown RBP15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 CRNKL1Q9BZJ0 848 aaKnown RBP15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 MKNK2Q9HBH9 465 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 M0R2N6 131 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 STXBP3O00186 592 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 POLR2FP61218 127 aaKnown RBP15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 ERFEQ4G0M1 354 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 TXNRD3Q86VQ6 643 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 NELFCDQ8IXH7 590 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 IQCKQ8N0W5 287 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 ZNF473Q8WTR7 871 aaKnown RBP15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 TBC1D5Q92609 795 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 UBA5Q9GZZ9 404 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 RAD51CO43502 376 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 TLR2O60603 784 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 TMOD1P28289 359 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 ACTN3Q08043 901 aaPredicted RBP15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 SPRED3Q2MJR0 410 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 CFAP221Q4G0U5 840 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 ALS2CLQ60I27 953 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 CHADLQ6NUI6 762 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 USP17L2Q6R6M4 530 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 KCNK18Q7Z418 384 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 IFT20Q8IY31 132 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 AP1M1Q9BXS5 423 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 PLAAQ9Y263 795 aa15.15■□□□□ 0.02
SEMA4D-217ENST00000475255 ZNF142P52746 1687 aaPredicted RBP15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 ORC4O43929 436 aa15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 FGRP09769 529 aa15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 KCNMA1Q12791 1236 aa15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 CCT8L2Q96SF2 557 aa15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 FGFBP2Q9BYJ0 223 aa15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 ADAMTS1Q9UHI8 967 aa15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 MEFVO15553 781 aaPredicted RBP15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 ECM2O94769 699 aaPredicted RBP15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 NTSR2O95665 410 aa15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 CRKLP46109 303 aaKnown RBP15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 FNTAP49354 379 aa15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 SKOR1P84550 965 aa15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 RAPGEF1Q13905 1077 aa15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 TMED8Q6PL24 325 aaPredicted RBP15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 TBCKQ8TEA7 893 aa15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 MINPP1Q9UNW1 487 aa15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 ZNF804BA4D1E1 1349 aa15.14■□□□□ 0.01
SEMA4D-217ENST00000475255 PAPPAQ13219 1627 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 SMCO2A6NFE2 343 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 MAP2K2P36507 400 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 ATP6V1AP38606 617 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 DIXDC1Q155Q3 683 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 HGSNATQ68CP4 663 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 PDXDC1Q6P996 788 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 INTS5Q6P9B9 1019 aaKnown RBP15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 CAVIN3Q969G5 261 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 LRRC4CQ9HCJ2 640 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 A0A1W2PQJ5 194 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 TSPY3P0CV98 308 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 TSPY8P0CW00 308 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 SF3B2Q13435 895 aaKnown RBP15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 PTGISQ16647 500 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 MAN2A1Q16706 1144 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 CNNM4Q6P4Q7 775 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 C7orf25Q9BPX7 421 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 LSM14BQ9BX40 385 aaKnown RBP15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 BLOC1S4Q9NUP1 217 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 A0A087X0T9 212 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 KLRF2D3W0D1 207 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 PPP1R37O75864 691 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 FAM228BP0C875 321 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 CDK17Q00537 523 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 GRB10Q13322 594 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 KIAA0753Q2KHM9 967 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 CENPPQ6IPU0 288 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 EP400NLQ6ZTU2 488 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 CCDC91Q7Z6B0 441 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 NLRP14Q86W24 1093 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 FAM133AQ8N9E0 248 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 MYCBPAPQ8TBZ2 947 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 YY1AP1Q9H869 796 aa15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 GEMIN8Q9NWZ8 242 aaKnown RBP15.13■□□□□ 0.01
SEMA4D-217ENST00000475255 TRAF5O00463 557 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 CAMTA2O94983 1202 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 ADAMTS2O95450 1211 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 EPB41P11171 864 aaKnown RBP15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 SETQ01105 290 aaPredicted RBP15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 PAK2Q13177 524 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 CCDC40Q4G0X9 1142 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 SV2BQ7L1I2 683 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 BARHL2Q9NY43 387 aa15.12■□□□□ 0.01
SEMA4D-217ENST00000475255 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms