RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ABCB11O95342 1321 aa14.76□□□□□ -0.05
SKA3-206ENST00000475251 LCHNA4D1U4 455 aa14.76□□□□□ -0.05
SKA3-206ENST00000475251 PI4K2BG5E9Z4 385 aa14.76□□□□□ -0.05
SKA3-206ENST00000475251 ARIH2O95376 493 aa14.76□□□□□ -0.05
SKA3-206ENST00000475251 SNHG28P0DPA3 235 aa14.76□□□□□ -0.05
SKA3-206ENST00000475251 CKBP12277 381 aa14.76□□□□□ -0.05
SKA3-206ENST00000475251 ERVK-21P61565 698 aa14.76□□□□□ -0.05
SKA3-206ENST00000475251 STXBP2Q15833 593 aa14.76□□□□□ -0.05
SKA3-206ENST00000475251 USH1GQ495M9 461 aa14.76□□□□□ -0.05
SKA3-206ENST00000475251 VPS53Q5VIR6 699 aa14.76□□□□□ -0.05
SKA3-206ENST00000475251 CCDC62Q6P9F0 684 aa14.76□□□□□ -0.05
SKA3-206ENST00000475251 SEPT14Q6ZU15 432 aa14.76□□□□□ -0.05
SKA3-206ENST00000475251 RNF41Q9H4P4 317 aaPredicted RBP14.76□□□□□ -0.05
SKA3-206ENST00000475251 UBE2ZQ9H832 354 aaPredicted RBP14.76□□□□□ -0.05
SKA3-206ENST00000475251 SUGCTQ9HAC7 445 aa14.76□□□□□ -0.05
SKA3-206ENST00000475251 GTF2IRD1Q9UHL9 959 aa14.76□□□□□ -0.05
SKA3-206ENST00000475251 CTNNA3Q9UI47 895 aa14.76□□□□□ -0.05
SKA3-206ENST00000475251 EMSYQ7Z589 1322 aa14.75□□□□□ -0.05
SKA3-206ENST00000475251 TRIP12Q14669 1992 aaPredicted RBP14.75□□□□□ -0.05
SKA3-206ENST00000475251 PTPRSQ13332 1948 aa14.75□□□□□ -0.05
SKA3-206ENST00000475251 FGAP02671 866 aa14.75□□□□□ -0.05
SKA3-206ENST00000475251 DEFB103AP81534 67 aa14.75□□□□□ -0.05
SKA3-206ENST00000475251 ARHGAP1Q07960 439 aa14.75□□□□□ -0.05
SKA3-206ENST00000475251 PTK7Q13308 1070 aa14.75□□□□□ -0.05
SKA3-206ENST00000475251 PUS10Q3MIT2 529 aaKnown RBP14.75□□□□□ -0.05
SKA3-206ENST00000475251 LEXMQ3ZCV2 418 aa14.75□□□□□ -0.05
SKA3-206ENST00000475251 MCMDC2Q4G0Z9 681 aa14.75□□□□□ -0.05
SKA3-206ENST00000475251 MFSD6Q6ZSS7 791 aa14.75□□□□□ -0.05
SKA3-206ENST00000475251 EMID1Q96A84 441 aaPredicted RBP14.75□□□□□ -0.05
SKA3-206ENST00000475251 MTUS1Q9ULD2 1270 aa14.75□□□□□ -0.05
SKA3-206ENST00000475251 INSL6Q9Y581 213 aa14.75□□□□□ -0.05
SKA3-206ENST00000475251 TET1Q8NFU7 2136 aa14.75□□□□□ -0.05
SKA3-206ENST00000475251 LINC01553A4QN01 128 aa14.74□□□□□ -0.05
SKA3-206ENST00000475251 PRR33A8MZF0 331 aa14.74□□□□□ -0.05
SKA3-206ENST00000475251 NBNO60934 754 aa14.74□□□□□ -0.05
SKA3-206ENST00000475251 ALADP13716 330 aa14.74□□□□□ -0.05
SKA3-206ENST00000475251 FXR2P51116 673 aaKnown RBP eCLIP14.74□□□□□ -0.05
SKA3-206ENST00000475251 LAMC2Q13753 1193 aa14.74□□□□□ -0.05
SKA3-206ENST00000475251 LY6KQ17RY6 165 aa14.74□□□□□ -0.05
SKA3-206ENST00000475251 CCDC178Q5BJE1 867 aa14.74□□□□□ -0.05
SKA3-206ENST00000475251 CHST3Q7LGC8 479 aa14.74□□□□□ -0.05
SKA3-206ENST00000475251 GJD3Q8N144 294 aa14.74□□□□□ -0.05
SKA3-206ENST00000475251 OTUD7AQ8TE49 926 aaPredicted RBP14.74□□□□□ -0.05
SKA3-206ENST00000475251 ESR2Q92731 530 aa14.74□□□□□ -0.05
SKA3-206ENST00000475251 KAT2BQ92831 832 aa14.74□□□□□ -0.05
SKA3-206ENST00000475251 CTAGE1Q96RT6 745 aa14.74□□□□□ -0.05
SKA3-206ENST00000475251 C11orf16Q9NQ32 467 aa14.74□□□□□ -0.05
SKA3-206ENST00000475251 SIP14410 1827 aa14.73□□□□□ -0.05
SKA3-206ENST00000475251 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.73□□□□□ -0.05
SKA3-206ENST00000475251 AMHP03971 560 aa14.73□□□□□ -0.05
SKA3-206ENST00000475251 PSEN2P49810 448 aa14.73□□□□□ -0.05
SKA3-206ENST00000475251 MFSD10Q14728 455 aa14.73□□□□□ -0.05
SKA3-206ENST00000475251 GPNMBQ14956 572 aa14.73□□□□□ -0.05
SKA3-206ENST00000475251 CDC37Q16543 378 aaPredicted RBP14.73□□□□□ -0.05
SKA3-206ENST00000475251 PTPROQ16827 1216 aa14.73□□□□□ -0.05
SKA3-206ENST00000475251 SPRED2Q7Z698 418 aa14.73□□□□□ -0.05
SKA3-206ENST00000475251 TMCO2Q7Z6W1 182 aaPredicted RBP14.73□□□□□ -0.05
SKA3-206ENST00000475251 DGKHQ86XP1 1220 aa14.73□□□□□ -0.05
SKA3-206ENST00000475251 PPTC7Q8NI37 304 aa14.73□□□□□ -0.05
SKA3-206ENST00000475251 SYTL5Q8TDW5 730 aaPredicted RBP14.73□□□□□ -0.05
SKA3-206ENST00000475251 DHX38Q92620 1227 aaKnown RBP14.73□□□□□ -0.05
SKA3-206ENST00000475251 SAMD11Q96NU1 681 aa14.73□□□□□ -0.05
SKA3-206ENST00000475251 RMDN3Q96TC7 470 aa14.73□□□□□ -0.05
SKA3-206ENST00000475251 HDAC6Q9UBN7 1215 aa14.73□□□□□ -0.05
SKA3-206ENST00000475251 MRPL11Q9Y3B7 192 aaKnown RBP14.73□□□□□ -0.05
SKA3-206ENST00000475251 MRVI1Q9Y6F6 885 aa14.73□□□□□ -0.05
SKA3-206ENST00000475251 FAM86C2PA6NEL3 165 aa14.72□□□□□ -0.05
SKA3-206ENST00000475251 LGR5O75473 907 aa14.72□□□□□ -0.05
SKA3-206ENST00000475251 EIF3JO75822 258 aaKnown RBP14.72□□□□□ -0.05
SKA3-206ENST00000475251 F2P00734 622 aa14.72□□□□□ -0.05
SKA3-206ENST00000475251 HSPD1P10809 573 aaKnown RBP14.72□□□□□ -0.05
SKA3-206ENST00000475251 KCNA5P22460 613 aa14.72□□□□□ -0.05
SKA3-206ENST00000475251 SSTR3P32745 418 aaPredicted RBP14.72□□□□□ -0.05
SKA3-206ENST00000475251 MFAP1P55081 439 aaKnown RBP14.72□□□□□ -0.05
SKA3-206ENST00000475251 KIAA0753Q2KHM9 967 aa14.72□□□□□ -0.05
SKA3-206ENST00000475251 ARHGEF16Q5VV41 709 aa14.72□□□□□ -0.05
SKA3-206ENST00000475251 KCNV1Q6PIU1 500 aa14.72□□□□□ -0.05
SKA3-206ENST00000475251 IQCA1Q86XH1 822 aa14.72□□□□□ -0.05
SKA3-206ENST00000475251 FAM178BQ8IXR5 827 aa14.72□□□□□ -0.05
SKA3-206ENST00000475251 DHX37Q8IY37 1157 aaKnown RBP14.72□□□□□ -0.05
SKA3-206ENST00000475251 FBXO22Q8NEZ5 403 aa14.72□□□□□ -0.05
SKA3-206ENST00000475251 TAAR1Q96RJ0 339 aa14.72□□□□□ -0.05
SKA3-206ENST00000475251 ALG1Q9BT22 464 aa14.72□□□□□ -0.05
SKA3-206ENST00000475251 DDX41Q9UJV9 622 aaKnown RBP14.72□□□□□ -0.05
SKA3-206ENST00000475251 FAM50BQ9Y247 325 aa14.72□□□□□ -0.05
SKA3-206ENST00000475251 KIAA1217Q5T5P2 1943 aa14.72□□□□□ -0.05
SKA3-206ENST00000475251 SALL3Q9BXA9 1300 aa14.71□□□□□ -0.05
SKA3-206ENST00000475251 GOLGA8HP0CJ92 632 aa14.71□□□□□ -0.05
SKA3-206ENST00000475251 HAND2P61296 217 aa14.71□□□□□ -0.05
SKA3-206ENST00000475251 CSPP1Q1MSJ5 1256 aa14.71□□□□□ -0.05
SKA3-206ENST00000475251 TIGD5Q53EQ6 642 aa14.71□□□□□ -0.05
SKA3-206ENST00000475251 ASPRV1Q53RT3 343 aa14.71□□□□□ -0.05
SKA3-206ENST00000475251 ZNF618Q5T7W0 954 aa14.71□□□□□ -0.05
SKA3-206ENST00000475251 DIEXFQ68CQ4 756 aaKnown RBP14.71□□□□□ -0.05
SKA3-206ENST00000475251 PTCRAQ6ISU1 281 aaPredicted RBP14.71□□□□□ -0.05
SKA3-206ENST00000475251 KHSRPQ92945 711 aaKnown RBP eCLIP14.71□□□□□ -0.05
SKA3-206ENST00000475251 MRPL38Q96DV4 380 aaKnown RBP14.71□□□□□ -0.05
SKA3-206ENST00000475251 UBA5Q9GZZ9 404 aa14.71□□□□□ -0.05
SKA3-206ENST00000475251 HAS3O00219 553 aa14.7□□□□□ -0.06
SKA3-206ENST00000475251 DHX16O60231 1041 aaKnown RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms