RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 LY6KQ17RY6 165 aa13.72□□□□□ -0.21
CLIP2-204ENST00000474962 NBPF20Q3BBV1 942 aa13.72□□□□□ -0.21
CLIP2-204ENST00000474962 CCDC62Q6P9F0 684 aa13.72□□□□□ -0.21
CLIP2-204ENST00000474962 SYNE3Q6ZMZ3 975 aa13.72□□□□□ -0.21
CLIP2-204ENST00000474962 MCF2L2Q86YR7 1114 aa13.72□□□□□ -0.21
CLIP2-204ENST00000474962 MTMR8Q96EF0 704 aa13.72□□□□□ -0.21
CLIP2-204ENST00000474962 MTG1Q9BT17 334 aaPredicted RBP13.72□□□□□ -0.21
CLIP2-204ENST00000474962 NOC4LQ9BVI4 516 aaKnown RBP13.72□□□□□ -0.21
CLIP2-204ENST00000474962 AMNQ9BXJ7 453 aa13.72□□□□□ -0.21
CLIP2-204ENST00000474962 GPHNQ9NQX3 736 aaPredicted RBP13.72□□□□□ -0.21
CLIP2-204ENST00000474962 POLR3EQ9NVU0 708 aa13.72□□□□□ -0.21
CLIP2-204ENST00000474962 PCDHA1Q9Y5I3 950 aa13.72□□□□□ -0.21
CLIP2-204ENST00000474962 ZBTB5O15062 677 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 NKRFO15226 690 aaKnown RBP eCLIP13.71□□□□□ -0.21
CLIP2-204ENST00000474962 FGBP02675 491 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 EIF2AK2P19525 551 aaKnown RBP13.71□□□□□ -0.21
CLIP2-204ENST00000474962 PBX2P40425 430 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 CHMP4BP1P59074 171 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 TTLL4Q14679 1199 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 STXBP2Q15833 593 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 RASIP1Q5U651 963 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 ARHGEF16Q5VV41 709 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 RUFY3Q7L099 469 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 CATIPQ7Z7H3 387 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 IGDCC4Q8TDY8 1250 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 AFG1LQ8WV93 481 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 MYLIPQ8WY64 445 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 VWCEQ96DN2 955 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 PIGSQ96S52 555 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 IWS1Q96ST2 819 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 SEZ6LQ9BYH1 1024 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 TM6SF1Q9BZW5 370 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 MAF1Q9H063 256 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 WNT8AQ9H1J5 351 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 IL23AQ9NPF7 189 aa13.71□□□□□ -0.21
CLIP2-204ENST00000474962 CXXC1Q9P0U4 656 aaPredicted RBP13.71□□□□□ -0.21
CLIP2-204ENST00000474962 NAP1L2Q9ULW6 460 aaPredicted RBP13.71□□□□□ -0.21
CLIP2-204ENST00000474962 CYTH3O43739 400 aa13.7□□□□□ -0.22
CLIP2-204ENST00000474962 EIF3JO75822 258 aaKnown RBP13.7□□□□□ -0.22
CLIP2-204ENST00000474962 NR3C2P08235 984 aa13.7□□□□□ -0.22
CLIP2-204ENST00000474962 RPS6KB1P23443 525 aa13.7□□□□□ -0.22
CLIP2-204ENST00000474962 DNAJB2P25686 324 aa13.7□□□□□ -0.22
CLIP2-204ENST00000474962 HOXA13P31271 388 aaPredicted RBP13.7□□□□□ -0.22
CLIP2-204ENST00000474962 ANTXR2P58335 489 aa13.7□□□□□ -0.22
CLIP2-204ENST00000474962 TROAPQ12815 778 aa13.7□□□□□ -0.22
CLIP2-204ENST00000474962 GRM4Q14833 912 aa13.7□□□□□ -0.22
CLIP2-204ENST00000474962 GRIN2CQ14957 1233 aa13.7□□□□□ -0.22
CLIP2-204ENST00000474962 BRDTQ58F21 947 aaPredicted RBP13.7□□□□□ -0.22
CLIP2-204ENST00000474962 OTOP2Q7RTS6 562 aa13.7□□□□□ -0.22
CLIP2-204ENST00000474962 SCLYQ96I15 445 aa13.7□□□□□ -0.22
CLIP2-204ENST00000474962 LRRC2Q9BYS8 371 aa13.7□□□□□ -0.22
CLIP2-204ENST00000474962 RIOX1Q9H6W3 641 aa13.7□□□□□ -0.22
CLIP2-204ENST00000474962 ZSWIM6Q9HCJ5 1215 aa13.7□□□□□ -0.22
CLIP2-204ENST00000474962 BAZ2BQ9UIF8 2168 aaKnown RBP13.7□□□□□ -0.22
CLIP2-204ENST00000474962 LRRC37A2A6NM11 1700 aa13.7□□□□□ -0.22
CLIP2-204ENST00000474962 SH2B2O14492 632 aaPredicted RBP13.69□□□□□ -0.22
CLIP2-204ENST00000474962 KPNA6O60684 536 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 CPA1P15085 419 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 LIFRP42702 1097 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 HSD17B4P51659 736 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 EXOSC10Q01780 885 aaKnown RBP13.69□□□□□ -0.22
CLIP2-204ENST00000474962 CACNB1Q02641 598 aaPredicted RBP13.69□□□□□ -0.22
CLIP2-204ENST00000474962 ARHGAP1Q07960 439 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 COL9A3Q14050 684 aaPredicted RBP13.69□□□□□ -0.22
CLIP2-204ENST00000474962 FAM47CQ5HY64 1035 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 Q6ZUG5 572 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 HOMER1Q86YM7 354 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 PIBF1Q8WXW3 757 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 HERVK_113Q902F9 699 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 ZFP91Q96JP5 570 aaPredicted RBP13.69□□□□□ -0.22
CLIP2-204ENST00000474962 TCEANC2Q96MN5 208 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 PBX4Q9BYU1 374 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 UPF3BQ9BZI7 483 aaKnown RBP13.69□□□□□ -0.22
CLIP2-204ENST00000474962 PXMP2Q9NR77 195 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 PDRG1Q9NUG6 133 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 DDX41Q9UJV9 622 aaKnown RBP13.69□□□□□ -0.22
CLIP2-204ENST00000474962 SLC12A7Q9Y666 1083 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 CUL9Q8IWT3 2517 aa13.69□□□□□ -0.22
CLIP2-204ENST00000474962 REV3LO60673 3130 aa13.68□□□□□ -0.22
CLIP2-204ENST00000474962 RGS20O76081 388 aa13.68□□□□□ -0.22
CLIP2-204ENST00000474962 SUPT20HL2P0C7V6 817 aa13.68□□□□□ -0.22
CLIP2-204ENST00000474962 MYCLP12524 364 aaPredicted RBP13.68□□□□□ -0.22
CLIP2-204ENST00000474962 NFRKBQ6P4R8 1299 aa13.68□□□□□ -0.22
CLIP2-204ENST00000474962 PSRC1Q6PGN9 363 aaPredicted RBP13.68□□□□□ -0.22
CLIP2-204ENST00000474962 CTCFLQ8NI51 663 aaPredicted RBP13.68□□□□□ -0.22
CLIP2-204ENST00000474962 TIFAQ96CG3 184 aa13.68□□□□□ -0.22
CLIP2-204ENST00000474962 ZNF576Q9H609 170 aa13.68□□□□□ -0.22
CLIP2-204ENST00000474962 LY9Q9HBG7 655 aa13.68□□□□□ -0.22
CLIP2-204ENST00000474962 PNMA6FA0A0J9YX94 578 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 RBAK-RBAKDNI3L0D1 243 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 SORBS3O60504 671 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 GH1P01241 217 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 CALM1P0DP23 149 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 CALM2P0DP24 149 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 CALM3P0DP25 149 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 RBM25P49756 843 aaKnown RBP13.67□□□□□ -0.22
CLIP2-204ENST00000474962 NEK4P51957 841 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 GHRHRQ02643 423 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 ANKRD1Q15327 319 aa13.67□□□□□ -0.22
CLIP2-204ENST00000474962 DEFB128Q7Z7B8 93 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms