RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 PNMA1Q8ND90 353 aa16.37■□□□□ 0.21
CCDC78-209ENST00000474647 TBC1D5Q92609 795 aa16.37■□□□□ 0.21
CCDC78-209ENST00000474647 TAAR1Q96RJ0 339 aa16.37■□□□□ 0.21
CCDC78-209ENST00000474647 CRBNQ96SW2 442 aa16.37■□□□□ 0.21
CCDC78-209ENST00000474647 LCHNA4D1U4 455 aa16.36■□□□□ 0.21
CCDC78-209ENST00000474647 ZNF213O14771 459 aa16.36■□□□□ 0.21
CCDC78-209ENST00000474647 CASTP20810 708 aaKnown RBP16.36■□□□□ 0.21
CCDC78-209ENST00000474647 MFAP1P55081 439 aaKnown RBP16.36■□□□□ 0.21
CCDC78-209ENST00000474647 GRB10Q13322 594 aa16.36■□□□□ 0.21
CCDC78-209ENST00000474647 CCDC62Q6P9F0 684 aa16.36■□□□□ 0.21
CCDC78-209ENST00000474647 IQCA1Q86XH1 822 aa16.36■□□□□ 0.21
CCDC78-209ENST00000474647 ADGRF4Q8IZF3 695 aa16.36■□□□□ 0.21
CCDC78-209ENST00000474647 RGS22Q8NE09 1264 aa16.36■□□□□ 0.21
CCDC78-209ENST00000474647 SYTL5Q8TDW5 730 aaPredicted RBP16.36■□□□□ 0.21
CCDC78-209ENST00000474647 NSUN6Q8TEA1 469 aaKnown RBP16.36■□□□□ 0.21
CCDC78-209ENST00000474647 GDPD5Q8WTR4 605 aa16.36■□□□□ 0.21
CCDC78-209ENST00000474647 RMDN3Q96TC7 470 aa16.36■□□□□ 0.21
CCDC78-209ENST00000474647 ALG1Q9BT22 464 aa16.36■□□□□ 0.21
CCDC78-209ENST00000474647 LNPKQ9C0E8 428 aa16.36■□□□□ 0.21
CCDC78-209ENST00000474647 KAT14Q9H8E8 782 aa16.36■□□□□ 0.21
CCDC78-209ENST00000474647 COL20A1Q9P218 1284 aa16.36■□□□□ 0.21
CCDC78-209ENST00000474647 MTUS1Q9ULD2 1270 aa16.36■□□□□ 0.21
CCDC78-209ENST00000474647 COG5Q9UP83 839 aa16.36■□□□□ 0.21
CCDC78-209ENST00000474647 LOXHD1Q8IVV2 1947 aa16.35■□□□□ 0.21
CCDC78-209ENST00000474647 KDM4AO75164 1064 aa16.35■□□□□ 0.21
CCDC78-209ENST00000474647 ZNF286BP0CG31 522 aa16.35■□□□□ 0.21
CCDC78-209ENST00000474647 SELPP16109 830 aa16.35■□□□□ 0.21
CCDC78-209ENST00000474647 EIF2AK2P19525 551 aaKnown RBP16.35■□□□□ 0.21
CCDC78-209ENST00000474647 DEFB103AP81534 67 aa16.35■□□□□ 0.21
CCDC78-209ENST00000474647 STXBP2Q15833 593 aa16.35■□□□□ 0.21
CCDC78-209ENST00000474647 DGKDQ16760 1214 aa16.35■□□□□ 0.21
CCDC78-209ENST00000474647 ARHGEF16Q5VV41 709 aa16.35■□□□□ 0.21
CCDC78-209ENST00000474647 CNKSR3Q6P9H4 555 aa16.35■□□□□ 0.21
CCDC78-209ENST00000474647 MCF2L2Q86YR7 1114 aa16.35■□□□□ 0.21
CCDC78-209ENST00000474647 C7orf31Q8N865 590 aa16.35■□□□□ 0.21
CCDC78-209ENST00000474647 DHX38Q92620 1227 aaKnown RBP16.35■□□□□ 0.21
CCDC78-209ENST00000474647 KAT2BQ92831 832 aa16.35■□□□□ 0.21
CCDC78-209ENST00000474647 HLA-CQ95604 372 aa16.35■□□□□ 0.21
CCDC78-209ENST00000474647 C1QTNF1Q9BXJ1 281 aa16.35■□□□□ 0.21
CCDC78-209ENST00000474647 B4E1Z4 1266 aa16.34■□□□□ 0.21
CCDC78-209ENST00000474647 CKBP12277 381 aa16.34■□□□□ 0.21
CCDC78-209ENST00000474647 QRICH1Q2TAL8 776 aa16.34■□□□□ 0.21
CCDC78-209ENST00000474647 ASPRV1Q53RT3 343 aa16.34■□□□□ 0.21
CCDC78-209ENST00000474647 SESTD1Q86VW0 696 aa16.34■□□□□ 0.21
CCDC78-209ENST00000474647 FBXO11Q86XK2 927 aa16.34■□□□□ 0.21
CCDC78-209ENST00000474647 DGKHQ86XP1 1220 aa16.34■□□□□ 0.21
CCDC78-209ENST00000474647 FAM122AQ96E09 287 aa16.34■□□□□ 0.21
CCDC78-209ENST00000474647 CTAGE1Q96RT6 745 aa16.34■□□□□ 0.21
CCDC78-209ENST00000474647 VAT1LQ9HCJ6 419 aa16.34■□□□□ 0.21
CCDC78-209ENST00000474647 HDAC6Q9UBN7 1215 aa16.34■□□□□ 0.21
CCDC78-209ENST00000474647 GTF2IRD1Q9UHL9 959 aa16.34■□□□□ 0.21
CCDC78-209ENST00000474647 MRVI1Q9Y6F6 885 aa16.34■□□□□ 0.21
CCDC78-209ENST00000474647 RBAK-RBAKDNI3L0D1 243 aa16.33■□□□□ 0.2
CCDC78-209ENST00000474647 SORBS3O60504 671 aa16.33■□□□□ 0.2
CCDC78-209ENST00000474647 CFBP00751 764 aa16.33■□□□□ 0.2
CCDC78-209ENST00000474647 PARP1P09874 1014 aaKnown RBP16.33■□□□□ 0.2
CCDC78-209ENST00000474647 PLA2G5P39877 138 aa16.33■□□□□ 0.2
CCDC78-209ENST00000474647 PSEN2P49810 448 aa16.33■□□□□ 0.2
CCDC78-209ENST00000474647 MFSD10Q14728 455 aa16.33■□□□□ 0.2
CCDC78-209ENST00000474647 CCDC178Q5BJE1 867 aa16.33■□□□□ 0.2
CCDC78-209ENST00000474647 B4GALNT3Q6L9W6 998 aa16.33■□□□□ 0.2
CCDC78-209ENST00000474647 FAM117BQ6P1L5 589 aa16.33■□□□□ 0.2
CCDC78-209ENST00000474647 IWS1Q96ST2 819 aa16.33■□□□□ 0.2
CCDC78-209ENST00000474647 KATNAL1Q9BW62 490 aa16.33■□□□□ 0.2
CCDC78-209ENST00000474647 MRPL11Q9Y3B7 192 aaKnown RBP16.33■□□□□ 0.2
CCDC78-209ENST00000474647 LPXNO60711 386 aa16.32■□□□□ 0.2
CCDC78-209ENST00000474647 NBNO60934 754 aa16.32■□□□□ 0.2
CCDC78-209ENST00000474647 SDSP20132 328 aa16.32■□□□□ 0.2
CCDC78-209ENST00000474647 HDAC1Q13547 482 aaPredicted RBP16.32■□□□□ 0.2
CCDC78-209ENST00000474647 GPNMBQ14956 572 aa16.32■□□□□ 0.2
CCDC78-209ENST00000474647 KIAA0753Q2KHM9 967 aa16.32■□□□□ 0.2
CCDC78-209ENST00000474647 TCTN1Q2MV58 587 aa16.32■□□□□ 0.2
CCDC78-209ENST00000474647 CWC27Q6UX04 472 aaKnown RBP16.32■□□□□ 0.2
CCDC78-209ENST00000474647 TICAM2Q86XR7 235 aa16.32■□□□□ 0.2
CCDC78-209ENST00000474647 DHX37Q8IY37 1157 aaKnown RBP16.32■□□□□ 0.2
CCDC78-209ENST00000474647 ENAHQ8N8S7 591 aaPredicted RBP16.32■□□□□ 0.2
CCDC78-209ENST00000474647 ZSCAN10Q96SZ4 725 aaPredicted RBP16.32■□□□□ 0.2
CCDC78-209ENST00000474647 PXMP2Q9NR77 195 aa16.32■□□□□ 0.2
CCDC78-209ENST00000474647 DIAPH3Q9NSV4 1193 aa16.32■□□□□ 0.2
CCDC78-209ENST00000474647 DDX41Q9UJV9 622 aaKnown RBP16.32■□□□□ 0.2
CCDC78-209ENST00000474647 PARNO95453 639 aaKnown RBP16.31■□□□□ 0.2
CCDC78-209ENST00000474647 NR3C2P08235 984 aa16.31■□□□□ 0.2
CCDC78-209ENST00000474647 MYCLP12524 364 aaPredicted RBP16.31■□□□□ 0.2
CCDC78-209ENST00000474647 MAF1Q9H063 256 aa16.31■□□□□ 0.2
CCDC78-209ENST00000474647 EPHX3Q9H6B9 360 aa16.31■□□□□ 0.2
CCDC78-209ENST00000474647 JMJD4Q9H9V9 463 aa16.31■□□□□ 0.2
CCDC78-209ENST00000474647 C5orf42Q9H799 3197 aa16.31■□□□□ 0.2
CCDC78-209ENST00000474647 ABHD14A-ACY1A0A1B0GW23 586 aa16.3■□□□□ 0.2
CCDC78-209ENST00000474647 EIF3JO75822 258 aaKnown RBP16.3■□□□□ 0.2
CCDC78-209ENST00000474647 GJB5O95377 273 aa16.3■□□□□ 0.2
CCDC78-209ENST00000474647 F2P00734 622 aa16.3■□□□□ 0.2
CCDC78-209ENST00000474647 CXCL10P02778 98 aa16.3■□□□□ 0.2
CCDC78-209ENST00000474647 RBL2Q08999 1139 aa16.3■□□□□ 0.2
CCDC78-209ENST00000474647 PTK7Q13308 1070 aa16.3■□□□□ 0.2
CCDC78-209ENST00000474647 LAMC2Q13753 1193 aa16.3■□□□□ 0.2
CCDC78-209ENST00000474647 IKBKEQ14164 716 aa16.3■□□□□ 0.2
CCDC78-209ENST00000474647 ZNF618Q5T7W0 954 aa16.3■□□□□ 0.2
CCDC78-209ENST00000474647 PPTC7Q8NI37 304 aa16.3■□□□□ 0.2
CCDC78-209ENST00000474647 EMID1Q96A84 441 aaPredicted RBP16.3■□□□□ 0.2
CCDC78-209ENST00000474647 TGS1Q96RS0 853 aaKnown RBP16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms