RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 RPS12P25398 132 aaKnown RBP10.98□□□□□ -0.65
USP39-214ENST00000474572 PSMD2Q13200 908 aa10.98□□□□□ -0.65
USP39-214ENST00000474572 ECM1Q16610 540 aa10.98□□□□□ -0.65
USP39-214ENST00000474572 FAM160B2Q86V87 743 aa10.98□□□□□ -0.65
USP39-214ENST00000474572 CNGA4Q8IV77 575 aa10.98□□□□□ -0.65
USP39-214ENST00000474572 GUF1Q8N442 669 aaKnown RBP10.98□□□□□ -0.65
USP39-214ENST00000474572 KCTD17Q8N5Z5 321 aa10.98□□□□□ -0.65
USP39-214ENST00000474572 DNAJC19Q96DA6 116 aa10.98□□□□□ -0.65
USP39-214ENST00000474572 CDK5RAP3Q96JB5 506 aa10.98□□□□□ -0.65
USP39-214ENST00000474572 SH2D4AQ9H788 454 aa10.98□□□□□ -0.65
USP39-214ENST00000474572 TAB2Q9NYJ8 693 aa10.98□□□□□ -0.65
USP39-214ENST00000474572 MAPK8IP1Q9UQF2 711 aa10.98□□□□□ -0.65
USP39-214ENST00000474572 STK24Q9Y6E0 443 aa10.98□□□□□ -0.65
USP39-214ENST00000474572 PHLPP2Q6ZVD8 1323 aa10.98□□□□□ -0.65
USP39-214ENST00000474572 LOXHD1Q8IVV2 1947 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 FRMD3A2A2Y4 597 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 NFKBIEO00221 500 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 N4BP3O15049 544 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 ZSCAN12O43309 604 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 COBLO75128 1261 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 FCER1AP12319 257 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 CCT6AP40227 531 aaKnown RBP10.97□□□□□ -0.65
USP39-214ENST00000474572 ADKP55263 362 aaKnown RBP10.97□□□□□ -0.65
USP39-214ENST00000474572 ETF1P62495 437 aaKnown RBP10.97□□□□□ -0.65
USP39-214ENST00000474572 GHRHRQ02643 423 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 RBL2Q08999 1139 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 TRIM65Q6PJ69 517 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 PPFIBP1Q86W92 1011 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 CCDC125Q86Z20 511 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 FAM114A1Q8IWE2 563 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 CDAN1Q8IWY9 1227 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 KIF18AQ8NI77 898 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 FBXO41Q8TF61 875 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 CHURC1Q8WUH1 139 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 TRIM47Q96LD4 638 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 FAM20AQ96MK3 541 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 TMEM39BQ9GZU3 492 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 MTFR1LQ9H019 292 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 TAOK3Q9H2K8 898 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 L2HGDHQ9H9P8 463 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 MYOZ2Q9NPC6 264 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 PPP2R2CQ9Y2T4 447 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 SMCHD1A6NHR9 2005 aa10.97□□□□□ -0.65
USP39-214ENST00000474572 DICER1Q9UPY3 1922 aaKnown RBP10.96□□□□□ -0.65
USP39-214ENST00000474572 PITPNM2Q9BZ72 1349 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 IGLV3-22A0A075B6J6 115 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 SPDYE3A6NKU9 549 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 PHF20L1A8MW92 1017 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 ASNSP08243 561 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 DNM2P50570 870 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 FXR1P51114 621 aaKnown RBP eCLIP10.96□□□□□ -0.65
USP39-214ENST00000474572 SNAP25P60880 206 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 DALRD3Q5D0E6 543 aaKnown RBP10.96□□□□□ -0.65
USP39-214ENST00000474572 FAM83BQ5T0W9 1011 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 HAUS3Q68CZ6 603 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 ANKRD40Q6AI12 368 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 MB21D1Q8N884 522 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 DDX12PQ92771 950 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 TEPSINQ96N21 525 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 SGIP1Q9BQI5 828 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 SRRTQ9BXP5 876 aaKnown RBP10.96□□□□□ -0.65
USP39-214ENST00000474572 VPS16Q9H269 839 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 SEMA6BQ9H3T3 888 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 VEZTQ9HBM0 779 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 ABHD10Q9NUJ1 306 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 FEM1BQ9UK73 627 aa10.96□□□□□ -0.65
USP39-214ENST00000474572 PHIPQ8WWQ0 1821 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 LOC285556D6RIA3 1793 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 FAM86B1E9PN63 330 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 RAD21O60216 631 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 MED24O75448 989 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 FAM86B2P0C5J1 330 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 RPA1P27694 616 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 POLD1P28340 1107 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 CASP14P31944 242 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 LRRC63Q05C16 580 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 COASYQ13057 564 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 IKQ13123 557 aaPredicted RBP10.95□□□□□ -0.66
USP39-214ENST00000474572 TNIP1Q15025 636 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 NBPF9Q3BBW0 867 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 USH1GQ495M9 461 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 ZCWPW2Q504Y3 356 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 FIGNQ5HY92 759 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 RAD9BQ6WBX8 426 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 ZNF710Q8N1W2 664 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 CSGALNACT2Q8N6G5 542 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 ANKRD7Q92527 254 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 CNOT6LQ96LI5 555 aaKnown RBP10.95□□□□□ -0.66
USP39-214ENST00000474572 TTYH3Q9C0H2 523 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 MAGEC2Q9UBF1 373 aaPredicted RBP10.95□□□□□ -0.66
USP39-214ENST00000474572 VAV3Q9UKW4 847 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 PCDHA2Q9Y5H9 948 aa10.95□□□□□ -0.66
USP39-214ENST00000474572 POTEB3A0JP26 581 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 POTECB2RU33 542 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 E9PMD0 336 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 MSH4O15457 936 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 TPM1P09493 284 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 PLA2G4BP0C869 781 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 CYP11B2P19099 503 aa10.94□□□□□ -0.66
USP39-214ENST00000474572 PTGER2P43116 358 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms