RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 LBHD1Q9BQE6 289 aaPredicted RBP18.44■□□□□ 0.54
ITGB1-210ENST00000474568 UBE2OQ9C0C9 1292 aaKnown RBP18.44■□□□□ 0.54
ITGB1-210ENST00000474568 ZSWIM6Q9HCJ5 1215 aa18.44■□□□□ 0.54
ITGB1-210ENST00000474568 MRVI1Q9Y6F6 885 aa18.44■□□□□ 0.54
ITGB1-210ENST00000474568 DNAH12Q6ZR08 3092 aa18.43■□□□□ 0.54
ITGB1-210ENST00000474568 DCDC2CA8MYV0 355 aa18.43■□□□□ 0.54
ITGB1-210ENST00000474568 ARVCFO00192 962 aa18.43■□□□□ 0.54
ITGB1-210ENST00000474568 MEIS2O14770 477 aa18.43■□□□□ 0.54
ITGB1-210ENST00000474568 RGS20O76081 388 aa18.43■□□□□ 0.54
ITGB1-210ENST00000474568 CPT1AP50416 773 aa18.43■□□□□ 0.54
ITGB1-210ENST00000474568 CHMP4BP1P59074 171 aa18.43■□□□□ 0.54
ITGB1-210ENST00000474568 VSIG10LQ86VR7 867 aa18.43■□□□□ 0.54
ITGB1-210ENST00000474568 PSTPIP2Q9H939 334 aa18.43■□□□□ 0.54
ITGB1-210ENST00000474568 TMEM39AQ9NV64 488 aa18.43■□□□□ 0.54
ITGB1-210ENST00000474568 RTEL1Q9NZ71 1219 aa18.43■□□□□ 0.54
ITGB1-210ENST00000474568 CYP46A1Q9Y6A2 500 aa18.43■□□□□ 0.54
ITGB1-210ENST00000474568 CABYRO75952 493 aa18.42■□□□□ 0.54
ITGB1-210ENST00000474568 GH1P01241 217 aa18.42■□□□□ 0.54
ITGB1-210ENST00000474568 NAPAP54920 295 aa18.42■□□□□ 0.54
ITGB1-210ENST00000474568 CCT2P78371 535 aaKnown RBP18.42■□□□□ 0.54
ITGB1-210ENST00000474568 FAAP100Q0VG06 881 aa18.42■□□□□ 0.54
ITGB1-210ENST00000474568 ITGA7Q13683 1181 aa18.42■□□□□ 0.54
ITGB1-210ENST00000474568 TOB2Q14106 344 aaPredicted RBP18.42■□□□□ 0.54
ITGB1-210ENST00000474568 TYW1BQ6NUM6 668 aa18.42■□□□□ 0.54
ITGB1-210ENST00000474568 AFG1LQ8WV93 481 aa18.42■□□□□ 0.54
ITGB1-210ENST00000474568 BADQ92934 168 aa18.42■□□□□ 0.54
ITGB1-210ENST00000474568 POLR3EQ9NVU0 708 aa18.42■□□□□ 0.54
ITGB1-210ENST00000474568 DDX41Q9UJV9 622 aaKnown RBP18.42■□□□□ 0.54
ITGB1-210ENST00000474568 ITGB8P26012 769 aa18.41■□□□□ 0.54
ITGB1-210ENST00000474568 CDK7P50613 346 aa18.41■□□□□ 0.54
ITGB1-210ENST00000474568 RCAN1P53805 252 aa18.41■□□□□ 0.54
ITGB1-210ENST00000474568 ARHGAP1Q07960 439 aa18.41■□□□□ 0.54
ITGB1-210ENST00000474568 BRDTQ58F21 947 aaPredicted RBP18.41■□□□□ 0.54
ITGB1-210ENST00000474568 ANKRD33Q7Z3H0 272 aa18.41■□□□□ 0.54
ITGB1-210ENST00000474568 AGXT2Q9BYV1 514 aa18.41■□□□□ 0.54
ITGB1-210ENST00000474568 NCOA5Q9HCD5 579 aaKnown RBP18.41■□□□□ 0.54
ITGB1-210ENST00000474568 PDRG1Q9NUG6 133 aa18.41■□□□□ 0.54
ITGB1-210ENST00000474568 GRIN2DO15399 1336 aa18.41■□□□□ 0.54
ITGB1-210ENST00000474568 CCDC196A0A1B0GTZ2 297 aa18.4■□□□□ 0.54
ITGB1-210ENST00000474568 PIK3CDO00329 1044 aa18.4■□□□□ 0.54
ITGB1-210ENST00000474568 PDIA3P30101 505 aaKnown RBP18.4■□□□□ 0.54
ITGB1-210ENST00000474568 MRPS9P82933 396 aaKnown RBP18.4■□□□□ 0.54
ITGB1-210ENST00000474568 PURAQ00577 322 aaKnown RBP18.4■□□□□ 0.54
ITGB1-210ENST00000474568 PHKBQ93100 1093 aa18.4■□□□□ 0.54
ITGB1-210ENST00000474568 PGBD1Q96JS3 809 aa18.4■□□□□ 0.54
ITGB1-210ENST00000474568 TOX2Q96NM4 488 aa18.4■□□□□ 0.54
ITGB1-210ENST00000474568 MTG1Q9BT17 334 aaPredicted RBP18.4■□□□□ 0.54
ITGB1-210ENST00000474568 TM6SF1Q9BZW5 370 aa18.4■□□□□ 0.54
ITGB1-210ENST00000474568 A6NJR5 290 aa18.39■□□□□ 0.53
ITGB1-210ENST00000474568 STXBP3O00186 592 aa18.39■□□□□ 0.53
ITGB1-210ENST00000474568 TLR3O15455 904 aaKnown RBP18.39■□□□□ 0.53
ITGB1-210ENST00000474568 SEC24BO95487 1268 aa18.39■□□□□ 0.53
ITGB1-210ENST00000474568 MMP3P08254 477 aa18.39■□□□□ 0.53
ITGB1-210ENST00000474568 RAG1P15918 1043 aa18.39■□□□□ 0.53
ITGB1-210ENST00000474568 BMP8BP34820 402 aa18.39■□□□□ 0.53
ITGB1-210ENST00000474568 STK3Q13188 491 aa18.39■□□□□ 0.53
ITGB1-210ENST00000474568 FAM47CQ5HY64 1035 aa18.39■□□□□ 0.53
ITGB1-210ENST00000474568 FAM126BQ8IXS8 530 aa18.39■□□□□ 0.53
ITGB1-210ENST00000474568 DHX37Q8IY37 1157 aaKnown RBP18.39■□□□□ 0.53
ITGB1-210ENST00000474568 FBXL16Q8N461 479 aa18.39■□□□□ 0.53
ITGB1-210ENST00000474568 PPP1R12CQ9BZL4 782 aa18.39■□□□□ 0.53
ITGB1-210ENST00000474568 TRPV6Q9H1D0 765 aa18.39■□□□□ 0.53
ITGB1-210ENST00000474568 FRMPD4Q14CM0 1322 aa18.39■□□□□ 0.53
ITGB1-210ENST00000474568 MROH7Q68CQ1 1323 aa18.39■□□□□ 0.53
ITGB1-210ENST00000474568 TRIOBPQ9H2D6 2365 aa18.39■□□□□ 0.53
ITGB1-210ENST00000474568 SPDYE3A6NKU9 549 aa18.38■□□□□ 0.53
ITGB1-210ENST00000474568 KIAA0355O15063 1070 aa18.38■□□□□ 0.53
ITGB1-210ENST00000474568 GGPS1O95749 300 aa18.38■□□□□ 0.53
ITGB1-210ENST00000474568 UBA1P22314 1058 aaKnown RBP18.38■□□□□ 0.53
ITGB1-210ENST00000474568 FXR1P51114 621 aaKnown RBP eCLIP18.38■□□□□ 0.53
ITGB1-210ENST00000474568 ADCY7P51828 1080 aa18.38■□□□□ 0.53
ITGB1-210ENST00000474568 SP2Q02086 613 aa18.38■□□□□ 0.53
ITGB1-210ENST00000474568 SLC43A3Q8NBI5 491 aa18.38■□□□□ 0.53
ITGB1-210ENST00000474568 SLC26A6Q9BXS9 759 aa18.38■□□□□ 0.53
ITGB1-210ENST00000474568 BCAS3Q9H6U6 928 aa18.38■□□□□ 0.53
ITGB1-210ENST00000474568 PCDHA6Q9UN73 950 aa18.38■□□□□ 0.53
ITGB1-210ENST00000474568 PCDHA8Q9Y5H6 950 aa18.38■□□□□ 0.53
ITGB1-210ENST00000474568 SMCO2A6NFE2 343 aa18.37■□□□□ 0.53
ITGB1-210ENST00000474568 B4GALT4O60513 344 aa18.37■□□□□ 0.53
ITGB1-210ENST00000474568 AKAP17AQ02040 695 aaKnown RBP18.37■□□□□ 0.53
ITGB1-210ENST00000474568 NBPF20Q3BBV1 942 aa18.37■□□□□ 0.53
ITGB1-210ENST00000474568 GNPTABQ3T906 1256 aa18.37■□□□□ 0.53
ITGB1-210ENST00000474568 TMEM260Q9NX78 707 aa18.37■□□□□ 0.53
ITGB1-210ENST00000474568 BARHL2Q9NY43 387 aa18.37■□□□□ 0.53
ITGB1-210ENST00000474568 TBX21Q9UL17 535 aa18.37■□□□□ 0.53
ITGB1-210ENST00000474568 RANBP2P49792 3224 aaKnown RBP18.36■□□□□ 0.53
ITGB1-210ENST00000474568 ZNF286BP0CG31 522 aa18.36■□□□□ 0.53
ITGB1-210ENST00000474568 SCG2P13521 617 aa18.36■□□□□ 0.53
ITGB1-210ENST00000474568 SEMA3FQ13275 785 aa18.36■□□□□ 0.53
ITGB1-210ENST00000474568 LAMC2Q13753 1193 aa18.36■□□□□ 0.53
ITGB1-210ENST00000474568 NID2Q14112 1375 aa18.36■□□□□ 0.53
ITGB1-210ENST00000474568 PFKFB3Q16875 520 aaPredicted RBP18.36■□□□□ 0.53
ITGB1-210ENST00000474568 CELF3Q5SZQ8 465 aaKnown RBP18.36■□□□□ 0.53
ITGB1-210ENST00000474568 PCNX4Q63HM2 1172 aa18.36■□□□□ 0.53
ITGB1-210ENST00000474568 PPP1R18Q6NYC8 613 aa18.36■□□□□ 0.53
ITGB1-210ENST00000474568 KCNV1Q6PIU1 500 aa18.36■□□□□ 0.53
ITGB1-210ENST00000474568 TDHQ8IZJ6 230 aa18.36■□□□□ 0.53
ITGB1-210ENST00000474568 SPATA33Q96N06 139 aa18.36■□□□□ 0.53
ITGB1-210ENST00000474568 INPP4AQ96PE3 977 aaPredicted RBP18.36■□□□□ 0.53
ITGB1-210ENST00000474568 MLXIPQ9HAP2 919 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 299.3 ms