RNA–Protein interactions for RNA: ENST00000474543.5

NELFCD-204, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 5

Gene NELFCD, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-204ENST00000474543 EYA3Q99504 573 aa16.05■□□□□ 0.16
NELFCD-204ENST00000474543 TSPYL1Q9H0U9 437 aa16.05■□□□□ 0.16
NELFCD-204ENST00000474543 LCMT1Q9UIC8 334 aa16.05■□□□□ 0.16
NELFCD-204ENST00000474543 HPCAL4Q9UM19 191 aa16.05■□□□□ 0.16
NELFCD-204ENST00000474543 ZC3H4Q9UPT8 1303 aaKnown RBP16.04■□□□□ 0.16
NELFCD-204ENST00000474543 ZNF263O14978 683 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 YY1P25490 414 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 PPP1R2P41236 205 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 VAV2P52735 878 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 KRT25Q7Z3Z0 450 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 ZNF444Q8N0Y2 327 aaPredicted RBP16.04■□□□□ 0.16
NELFCD-204ENST00000474543 LZTS2Q9BRK4 669 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 ZC3H12CQ9C0D7 883 aaKnown RBP16.04■□□□□ 0.16
NELFCD-204ENST00000474543 VPS33BQ9H267 617 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 CPVLQ9H3G5 476 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 FAM204AQ9H8W3 233 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 STX8Q9UNK0 236 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 MYH10P35580 1976 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 MACROD2A1Z1Q3 448 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 KLRF2D3W0D1 207 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 RNF40O75150 1001 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 ZMYND10O75800 440 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 IVLP07476 585 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 IDEP14735 1019 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 TNNT3P45378 269 aaPredicted RBP16.04■□□□□ 0.16
NELFCD-204ENST00000474543 SLC20A2Q08357 652 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 KIF5AQ12840 1032 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 NONOQ15233 471 aaKnown RBP eCLIP16.04■□□□□ 0.16
NELFCD-204ENST00000474543 COBLL1Q53SF7 1204 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 KIAA0895Q8NCT3 520 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 COG1Q8WTW3 980 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 HPS3Q969F9 1004 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 MMTAG2Q9BU76 263 aaKnown RBP16.04■□□□□ 0.16
NELFCD-204ENST00000474543 SEMA6BQ9H3T3 888 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 LEMD3Q9Y2U8 911 aa16.04■□□□□ 0.16
NELFCD-204ENST00000474543 DICER1Q9UPY3 1922 aaKnown RBP16.03■□□□□ 0.16
NELFCD-204ENST00000474543 PRPF6O94906 941 aaKnown RBP16.03■□□□□ 0.16
NELFCD-204ENST00000474543 LDHBP07195 334 aaKnown RBP16.03■□□□□ 0.16
NELFCD-204ENST00000474543 PLEKP08567 350 aaPredicted RBP16.03■□□□□ 0.16
NELFCD-204ENST00000474543 TECP42680 631 aa16.03■□□□□ 0.16
NELFCD-204ENST00000474543 NAPAP54920 295 aa16.03■□□□□ 0.16
NELFCD-204ENST00000474543 FKBP15Q5T1M5 1219 aa16.03■□□□□ 0.16
NELFCD-204ENST00000474543 KRT26Q7Z3Y9 468 aa16.03■□□□□ 0.16
NELFCD-204ENST00000474543 CAGE1Q8TC20 777 aa16.03■□□□□ 0.16
NELFCD-204ENST00000474543 SECISBP2LQ93073 1101 aaKnown RBP16.03■□□□□ 0.16
NELFCD-204ENST00000474543 SPZ1Q9BXG8 430 aa16.03■□□□□ 0.16
NELFCD-204ENST00000474543 JADE2Q9NQC1 790 aa16.03■□□□□ 0.16
NELFCD-204ENST00000474543 LRWD1Q9UFC0 647 aa16.03■□□□□ 0.16
NELFCD-204ENST00000474543 NAV1Q8NEY1 1877 aa16.03■□□□□ 0.16
NELFCD-204ENST00000474543 LTBP1Q14766 1721 aa16.03■□□□□ 0.16
NELFCD-204ENST00000474543 SMCO2A6NFE2 343 aa16.02■□□□□ 0.16
NELFCD-204ENST00000474543 MYO1CO00159 1063 aa16.02■□□□□ 0.16
NELFCD-204ENST00000474543 MYBL2P10244 700 aa16.02■□□□□ 0.16
NELFCD-204ENST00000474543 RASA1P20936 1047 aa16.02■□□□□ 0.16
NELFCD-204ENST00000474543 HNRNPH3P31942 346 aaKnown RBP16.02■□□□□ 0.16
NELFCD-204ENST00000474543 AMPD3Q01432 767 aa16.02■□□□□ 0.16
NELFCD-204ENST00000474543 CENPPQ6IPU0 288 aa16.02■□□□□ 0.16
NELFCD-204ENST00000474543 CNNM4Q6P4Q7 775 aa16.02■□□□□ 0.16
NELFCD-204ENST00000474543 CCNI2Q6ZMN8 369 aaPredicted RBP16.02■□□□□ 0.16
NELFCD-204ENST00000474543 SRLQ86TD4 932 aa16.02■□□□□ 0.16
NELFCD-204ENST00000474543 AMOTL1Q8IY63 956 aa16.02■□□□□ 0.16
NELFCD-204ENST00000474543 NIM1KQ8IY84 436 aa16.02■□□□□ 0.16
NELFCD-204ENST00000474543 CCDC42Q96M95 316 aa16.02■□□□□ 0.16
NELFCD-204ENST00000474543 TSGA10Q9BZW7 698 aa16.02■□□□□ 0.16
NELFCD-204ENST00000474543 PLAGL2Q9UPG8 496 aa16.02■□□□□ 0.16
NELFCD-204ENST00000474543 G3V3G9 751 aa16.02■□□□□ 0.15
NELFCD-204ENST00000474543 DIXDC1Q155Q3 683 aa16.02■□□□□ 0.15
NELFCD-204ENST00000474543 GRIK5Q16478 980 aa16.02■□□□□ 0.15
NELFCD-204ENST00000474543 DCAF8Q5TAQ9 597 aa16.02■□□□□ 0.15
NELFCD-204ENST00000474543 FOXR1Q6PIV2 292 aa16.02■□□□□ 0.15
NELFCD-204ENST00000474543 LRRC31Q6UY01 552 aa16.02■□□□□ 0.15
NELFCD-204ENST00000474543 NEK8Q86SG6 692 aa16.02■□□□□ 0.15
NELFCD-204ENST00000474543 TGFBRAP1Q8WUH2 860 aa16.02■□□□□ 0.15
NELFCD-204ENST00000474543 GDAP1L1Q96MZ0 367 aa16.02■□□□□ 0.15
NELFCD-204ENST00000474543 C6orf50Q9HD87 102 aa16.02■□□□□ 0.15
NELFCD-204ENST00000474543 PPP4CP60510 307 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 C2orf54Q08AI8 447 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 SPA17Q15506 151 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 CREG2Q8IUH2 290 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 WDR66Q8TBY9 1149 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 SMCR8Q8TEV9 937 aaPredicted RBP16.01■□□□□ 0.15
NELFCD-204ENST00000474543 IQCDQ96DY2 449 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 SLC39A2Q9NP94 309 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 ARHGAP20Q9P2F6 1191 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 SIK3Q9Y2K2 1263 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 RRP15Q9Y3B9 282 aaKnown RBP16.01■□□□□ 0.15
NELFCD-204ENST00000474543 JRKLQ9Y4A0 524 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 BAG3O95817 575 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 GNA11P29992 359 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 DOK7Q18PE1 504 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 CCDC96Q2M329 555 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 VWA3BQ502W6 1294 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 GSPT2Q8IYD1 628 aaKnown RBP16.01■□□□□ 0.15
NELFCD-204ENST00000474543 TRIM58Q8NG06 486 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 TBCKQ8TEA7 893 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 AFAP1L1Q8TED9 768 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 CALML4Q96GE6 196 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 SELENOOQ9BVL4 669 aa16.01■□□□□ 0.15
NELFCD-204ENST00000474543 SAP30BPQ9UHR5 308 aaKnown RBP16.01■□□□□ 0.15
NELFCD-204ENST00000474543 SNX12Q9UMY4 172 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms