RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 TFE3P19532 575 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-209ENST00000474157 EIF4A3P38919 411 aaKnown RBP8.24□□□□□ -1.09
GPNMB-209ENST00000474157 RPS26P62854 115 aaKnown RBP8.24□□□□□ -1.09
GPNMB-209ENST00000474157 FAM160A1Q05DH4 1040 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 PAK2Q13177 524 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 C16orf87Q6PH81 154 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 SEPT14Q6ZU15 432 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.24□□□□□ -1.09
GPNMB-209ENST00000474157 KIAA0825Q8IV33 1275 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 TCP11L2Q8N4U5 519 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 NEK11Q8NG66 645 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 ZFAND2BQ8WV99 257 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 SMARCE1Q969G3 411 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 PPP1R14BQ96C90 147 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 MPHOSPH6Q99547 160 aaKnown RBP8.24□□□□□ -1.09
GPNMB-209ENST00000474157 SPON2Q9BUD6 331 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 ODF2LQ9ULJ1 636 aa8.24□□□□□ -1.09
GPNMB-209ENST00000474157 ATP10DQ9P241 1426 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 K7ELQ4 463 aaPredicted RBP8.23□□□□□ -1.09
GPNMB-209ENST00000474157 TPPPO94811 219 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 FESP07332 822 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 ARNTP27540 789 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 TPP2P29144 1249 aaPredicted RBP8.23□□□□□ -1.09
GPNMB-209ENST00000474157 PSMD7P51665 324 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 LMNB2Q03252 620 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 AP3B2Q13367 1082 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 CAMK2GQ13555 558 aaPredicted RBP8.23□□□□□ -1.09
GPNMB-209ENST00000474157 GNL2Q13823 731 aaKnown RBP8.23□□□□□ -1.09
GPNMB-209ENST00000474157 CHRNA2Q15822 529 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 SLC4A8Q2Y0W8 1093 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 SNAP47Q5SQN1 464 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 C20orf194Q5TEA3 1177 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 MFSD4BQ5TF39 518 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 ANKRD45Q5TZF3 282 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 FBXO38Q6PIJ6 1188 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 JARID2Q92833 1246 aaPredicted RBP8.23□□□□□ -1.09
GPNMB-209ENST00000474157 OSGEPQ9NPF4 335 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 ENAMQ9NRM1 1142 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 WDR37Q9Y2I8 494 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 PCDHB5Q9Y5E4 795 aa8.23□□□□□ -1.09
GPNMB-209ENST00000474157 MYOM1P52179 1685 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 CEP104O60308 925 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 ECEL1O95672 775 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 TUBBP07437 444 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 LMNB1P20700 586 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 RAB27AP51159 221 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 CCDC15Q0P6D6 951 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 FOXD4Q12950 439 aaPredicted RBP8.22□□□□□ -1.09
GPNMB-209ENST00000474157 KRT72Q14CN4 511 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 TXNRD1Q16881 649 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 KBTBD12Q3ZCT8 623 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 LLGL2Q6P1M3 1020 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 FBXL19Q6PCT2 694 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 AMOTL1Q8IY63 956 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 FAM81AQ8TBF8 368 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 GRIN3AQ8TCU5 1115 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 ZNF296Q8WUU4 475 aaPredicted RBP8.22□□□□□ -1.09
GPNMB-209ENST00000474157 EZH1Q92800 747 aaPredicted RBP8.22□□□□□ -1.09
GPNMB-209ENST00000474157 N4BP2L2Q92802 583 aaPredicted RBP8.22□□□□□ -1.09
GPNMB-209ENST00000474157 THOC1Q96FV9 657 aaKnown RBP8.22□□□□□ -1.09
GPNMB-209ENST00000474157 KLHDC7BQ96G42 594 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 EMILIN2Q9BXX0 1053 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 RETREG1Q9H6L5 497 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 TUBA8Q9NY65 449 aaPredicted RBP8.22□□□□□ -1.09
GPNMB-209ENST00000474157 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.22□□□□□ -1.09
GPNMB-209ENST00000474157 ADAM21Q9UKJ8 722 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 CYP8B1Q9UNU6 501 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 IFT172Q9UG01 1749 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 MYBBP1AQ9BQG0 1328 aaKnown RBP8.22□□□□□ -1.09
GPNMB-209ENST00000474157 GPRASP1Q5JY77 1395 aa8.22□□□□□ -1.09
GPNMB-209ENST00000474157 RPAP1Q9BWH6 1393 aaPredicted RBP8.22□□□□□ -1.09
GPNMB-209ENST00000474157 TECPR2O15040 1411 aa8.21□□□□□ -1.09
GPNMB-209ENST00000474157 CHD4Q14839 1912 aa8.21□□□□□ -1.09
GPNMB-209ENST00000474157 LIN7AO14910 233 aaPredicted RBP8.21□□□□□ -1.1
GPNMB-209ENST00000474157 ADCY5O95622 1261 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 GSTP1P09211 210 aaKnown RBP8.21□□□□□ -1.1
GPNMB-209ENST00000474157 GARTP22102 1010 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 STIP1P31948 543 aaKnown RBP8.21□□□□□ -1.1
GPNMB-209ENST00000474157 GCKP35557 465 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 GCLCP48506 637 aaPredicted RBP8.21□□□□□ -1.1
GPNMB-209ENST00000474157 SCRN1Q12765 414 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 PRPF4BQ13523 1007 aaKnown RBP8.21□□□□□ -1.1
GPNMB-209ENST00000474157 SMC1AQ14683 1233 aaKnown RBP8.21□□□□□ -1.1
GPNMB-209ENST00000474157 LRRC14Q15048 493 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 KIAA0753Q2KHM9 967 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 CCDC57Q2TAC2 916 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 TRAPPC3LQ5T215 181 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 ISM2Q6H9L7 571 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 LRRC31Q6UY01 552 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 PDZD3Q86UT5 571 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 REXO1L1PQ8IX06 675 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 MIGA1Q8NAN2 632 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 PRPF38AQ8NAV1 312 aaKnown RBP8.21□□□□□ -1.1
GPNMB-209ENST00000474157 GOLM1Q8NBJ4 401 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 GALNT11Q8NCW6 608 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 SREK1Q8WXA9 508 aaKnown RBP8.21□□□□□ -1.1
GPNMB-209ENST00000474157 GPRASP2Q96D09 838 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 FMNL2Q96PY5 1086 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 MPHOSPH9Q99550 1183 aa8.21□□□□□ -1.1
GPNMB-209ENST00000474157 MAK16Q9BXY0 300 aaKnown RBP8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms