RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 PYGMP11217 842 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 SRFP11831 508 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 IL2P60568 153 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 ITKQ08881 620 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 STAT4Q14765 748 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 TTF1Q15361 905 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-212ENST00000473961 PCBP1Q15365 356 aaKnown RBP eCLIP5.68□□□□□ -1.5
BRCA1-212ENST00000473961 LBX2Q6XYB7 198 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 TSPYL5Q86VY4 417 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-212ENST00000473961 KREMEN2Q8NCW0 462 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 FRS2Q8WU20 508 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 MTMR8Q96EF0 704 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 MMP19Q99542 508 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 SLC12A9Q9BXP2 914 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 FAM126AQ9BYI3 521 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-212ENST00000473961 TCFL5Q9UL49 500 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 FAN1Q9Y2M0 1017 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 EID1Q9Y6B2 187 aa5.68□□□□□ -1.5
BRCA1-212ENST00000473961 PHLDB1Q86UU1 1377 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 SHISA3A0PJX4 238 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 FAM47E-STBD1D6RA91 191 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 ULK1O75385 1050 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 SYPP08247 313 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 PLS3P13797 630 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 IFNGR1P15260 489 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 TPP2P29144 1249 aaPredicted RBP5.67□□□□□ -1.5
BRCA1-212ENST00000473961 LTKP29376 864 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 TMPRSS15P98073 1019 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 ARHGAP44Q17R89 818 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 KCNT2Q6UVM3 1135 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 FAM214BQ7L5A3 538 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 TMPRSS7Q7RTY8 843 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 HEXIM2Q96MH2 286 aaKnown RBP5.67□□□□□ -1.5
BRCA1-212ENST00000473961 CDADC1Q9BWV3 514 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 CELF4Q9BZC1 486 aaKnown RBP5.67□□□□□ -1.5
BRCA1-212ENST00000473961 GPRC5CQ9NQ84 441 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 CLEC1BQ9P126 229 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 PCDHA8Q9Y5H6 950 aa5.67□□□□□ -1.5
BRCA1-212ENST00000473961 LRRC10BA6NIK2 292 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 PRR33A8MZF0 331 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 F2P00734 622 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 RNASE1P07998 156 aaKnown RBP5.66□□□□□ -1.5
BRCA1-212ENST00000473961 INHBBP09529 407 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 BPIP17213 487 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 NEK2P51955 445 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 PPP2R5AQ15172 486 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 SEPT7Q16181 437 aaKnown RBP5.66□□□□□ -1.5
BRCA1-212ENST00000473961 CDKAL1Q5VV42 579 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 IQSEC1Q6DN90 963 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 ZNF765Q7L2R6 523 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 STRA8Q7Z7C7 330 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 FBXW5Q969U6 566 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 MTFR1LQ9H019 292 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 LRRC4CQ9HCJ2 640 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 DUSP13Q9UII6 198 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 ADAMTS6Q9UKP5 1117 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 MINPP1Q9UNW1 487 aa5.66□□□□□ -1.5
BRCA1-212ENST00000473961 ARID4BQ4LE39 1312 aaPredicted RBP5.66□□□□□ -1.5
BRCA1-212ENST00000473961 ASXL2Q76L83 1435 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 FAM83GA6ND36 823 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 CBX4O00257 560 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 KATNA1O75449 491 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 SOD2P04179 222 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 CEACAM5P06731 702 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 FUT4P22083 530 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 GRK2P25098 689 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 GRK3P35626 688 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 DENND5AQ6IQ26 1287 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 ZBTB46Q86UZ6 589 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 PASD1Q8IV76 773 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 IGSF22Q8N9C0 903 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 CHST14Q8NCH0 376 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 CHAMP1Q96JM3 812 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 C8orf48Q96LL4 319 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 PTCHD1Q96NR3 888 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 POLR3GLQ9BT43 218 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 MCMBPQ9BTE3 642 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 DUSP15Q9H1R2 295 aaPredicted RBP5.65□□□□□ -1.5
BRCA1-212ENST00000473961 MBNL3Q9NUK0 354 aaKnown RBP5.65□□□□□ -1.5
BRCA1-212ENST00000473961 SNX11Q9Y5W9 270 aa5.65□□□□□ -1.5
BRCA1-212ENST00000473961 CNTNAP4Q9C0A0 1308 aa5.65□□□□□ -1.51
BRCA1-212ENST00000473961 TMEM265A0A087WTH1 108 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 M0R2C6 588 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 NEMP1O14524 444 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 WNT9AO14904 365 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 KIF3BO15066 747 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 FGF10O15520 208 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-212ENST00000473961 PRC1O43663 620 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 NPHS1O60500 1241 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 GLRX3O76003 335 aaKnown RBP5.64□□□□□ -1.51
BRCA1-212ENST00000473961 LSSP48449 732 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 KPNA1P52294 538 aaPredicted RBP5.64□□□□□ -1.51
BRCA1-212ENST00000473961 OXCT1P55809 520 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 CTSWP56202 376 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 RPL11P62913 178 aaKnown RBP5.64□□□□□ -1.51
BRCA1-212ENST00000473961 KRTAP1-1Q07627 177 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 CYP4F3Q08477 520 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 LSAMPQ13449 338 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 MTMR1Q13613 665 aa5.64□□□□□ -1.51
BRCA1-212ENST00000473961 CRY1Q16526 586 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms