RNA–Protein interactions for RNA: ENST00000473714.1

CALD1-216, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 230 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-216ENST00000473714 FANCGO15287 622 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 FBXO24O75426 580 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 CBX7O95931 251 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 FSHBP01225 129 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 XRCC5P13010 732 aaKnown RBP3.26□□□□□ -1.89
CALD1-216ENST00000473714 ECE1P42892 770 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 HMGA2P52926 109 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 TGFB2P61812 414 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 NFE2L2Q16236 605 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 VMACQ2NL98 169 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 SNAP47Q5SQN1 464 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 FBXW10Q5XX13 1052 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 MAP1SQ66K74 1059 aaPredicted RBP3.26□□□□□ -1.89
CALD1-216ENST00000473714 GIMAP6Q6P9H5 292 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 TPTE2Q6XPS3 522 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 ARMCX6Q7L4S7 300 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 CREG2Q8IUH2 290 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 SULF2Q8IWU5 870 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 ANKRD13AQ8IZ07 590 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 SYT8Q8NBV8 401 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 SLC16A11Q8NCK7 471 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 GPBAR1Q8TDU6 330 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 GPR101Q96P66 508 aaPredicted RBP3.26□□□□□ -1.89
CALD1-216ENST00000473714 SORCS2Q96PQ0 1159 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 CRBNQ96SW2 442 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 CEP44Q9C0F1 390 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 OSBPL2Q9H1P3 480 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 COPRSQ9NQ92 184 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 TMEM39AQ9NV64 488 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 EFR3BQ9Y2G0 817 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 YBX2Q9Y2T7 364 aaKnown RBP3.26□□□□□ -1.89
CALD1-216ENST00000473714 CASKIN1Q8WXD9 1431 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 IQGAP3Q86VI3 1631 aa3.26□□□□□ -1.89
CALD1-216ENST00000473714 ANKRD30BQ9BXX2 1392 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 MKI67P46013 3256 aaKnown RBP3.25□□□□□ -1.89
CALD1-216ENST00000473714 COL18A1P39060 1754 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 NRXN1Q9ULB1 1477 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 TLDC2A0PJX2 215 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 FITM1A5D6W6 292 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 K7ESM1 405 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 LRIG2O94898 1065 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 SLITRK5O94991 958 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 ESR1P03372 595 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 ATF4P18848 351 aaPredicted RBP3.25□□□□□ -1.89
CALD1-216ENST00000473714 IBSPP21815 317 aaPredicted RBP3.25□□□□□ -1.89
CALD1-216ENST00000473714 ARNTP27540 789 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 MCM4P33991 863 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 EIF4A3P38919 411 aaKnown RBP3.25□□□□□ -1.89
CALD1-216ENST00000473714 NASPP49321 788 aaPredicted RBP3.25□□□□□ -1.89
CALD1-216ENST00000473714 CHMP4BP1P59074 171 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 FAM160A1Q05DH4 1040 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 SNX17Q15036 470 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 ANAPC16Q96DE5 110 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 SEC16BQ96JE7 1060 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 TMEM74Q96NL1 305 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 GMLQ99445 158 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 NOC4LQ9BVI4 516 aaKnown RBP3.25□□□□□ -1.89
CALD1-216ENST00000473714 EMILIN2Q9BXX0 1053 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 LUC7LQ9NQ29 371 aaKnown RBP3.25□□□□□ -1.89
CALD1-216ENST00000473714 SIRT5Q9NXA8 310 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 CNOT11Q9UKZ1 510 aaKnown RBP3.25□□□□□ -1.89
CALD1-216ENST00000473714 STXBP5LQ9Y2K9 1186 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 SAMM50Q9Y512 469 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 MRVI1Q9Y6F6 885 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 KIF13BQ9NQT8 1826 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 USP6P35125 1406 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 NAIPQ13075 1403 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 SPTBN5Q9NRC6 3674 aaKnown RBP3.25□□□□□ -1.89
CALD1-216ENST00000473714 UNC80Q8N2C7 3258 aa3.25□□□□□ -1.89
CALD1-216ENST00000473714 IFT172Q9UG01 1749 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 LMO7Q8WWI1 1683 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 TRPM1Q7Z4N2 1603 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 DCDC2CA8MYV0 355 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 TNFRSF1AP19438 455 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 CYP7A1P22680 504 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 RBL2Q08999 1139 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 ZNF252P-AS1Q0IIN9 211 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 APOBRQ0VD83 1088 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 MAP3K12Q12852 859 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 ZBTB37Q5TC79 503 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 ZNF746Q6NUN9 644 aaPredicted RBP3.24□□□□□ -1.89
CALD1-216ENST00000473714 SV2BQ7L1I2 683 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 ERMP1Q7Z2K6 904 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 C12orf40Q86WS4 652 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 MCF2L2Q86YR7 1114 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 SPPL2CQ8IUH8 684 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 ZNF507Q8TCN5 953 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 PPP1R13LQ8WUF5 828 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 ZNF296Q8WUU4 475 aaPredicted RBP3.24□□□□□ -1.89
CALD1-216ENST00000473714 JARID2Q92833 1246 aaPredicted RBP3.24□□□□□ -1.89
CALD1-216ENST00000473714 SYTL4Q96C24 671 aaPredicted RBP3.24□□□□□ -1.89
CALD1-216ENST00000473714 CAPNS2Q96L46 248 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 SRPK1Q96SB4 655 aaKnown RBP3.24□□□□□ -1.89
CALD1-216ENST00000473714 P2RX7Q99572 595 aaKnown RBP3.24□□□□□ -1.89
CALD1-216ENST00000473714 MIPEPQ99797 713 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 MENTQ9BUN1 341 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 RSRP1Q9BUV0 290 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 SP110Q9HB58 689 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 PPM1HQ9ULR3 514 aa3.24□□□□□ -1.89
CALD1-216ENST00000473714 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms