RNA–Protein interactions for RNA: ENST00000473598.6

LMNA-213, Transcript of lamin A/C, humanhuman

TSL 2 BASIC

Gene LMNA, Length 2,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-213ENST00000473598 CCL15Q16663 113 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 RESP18Q5W5W9 173 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 RBM43Q6ZSC3 357 aaKnown RBP16.7■□□□□ 0.26
LMNA-213ENST00000473598 ENGASEQ8NFI3 743 aa16.7■□□□□ 0.26
LMNA-213ENST00000473598 ZNF214Q9UL59 606 aaPredicted RBP16.7■□□□□ 0.26
LMNA-213ENST00000473598 IGF2BP3O00425 579 aaKnown RBP eCLIP16.69■□□□□ 0.26
LMNA-213ENST00000473598 CLGNO14967 610 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 USP11P51784 963 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 GTF2A2P52657 109 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 GHRHRQ02643 423 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 TMEM132BQ14DG7 1078 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 PPP4R3AQ6IN85 833 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 MCF2L2Q86YR7 1114 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 CRYGNQ8WXF5 182 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 CLSTN2Q9H4D0 955 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 FAM237AA0A1B0GTK4 181 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 MANSC4A6NHS7 340 aaPredicted RBP16.69■□□□□ 0.26
LMNA-213ENST00000473598 NFIBO00712 420 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 NEMFO60524 1076 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 CCDC192P0DO97 292 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 HSD17B4P51659 736 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 NDUFA8P51970 172 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 CAMK4Q16566 473 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 MUM1L1Q5H9M0 696 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 FMR1NBQ8N0W7 255 aaPredicted RBP16.69■□□□□ 0.26
LMNA-213ENST00000473598 SAMD3Q8N6K7 520 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 NAP1L4Q99733 375 aaKnown RBP16.69■□□□□ 0.26
LMNA-213ENST00000473598 CSRNP2Q9H175 543 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 TMEM60Q9H2L4 133 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 TNMDQ9H2S6 317 aa16.69■□□□□ 0.26
LMNA-213ENST00000473598 RIOK3O14730 519 aaKnown RBP16.68■□□□□ 0.26
LMNA-213ENST00000473598 TDP2O95551 362 aa16.68■□□□□ 0.26
LMNA-213ENST00000473598 PFKFB1P16118 471 aa16.68■□□□□ 0.26
LMNA-213ENST00000473598 SREBF1P36956 1147 aa16.68■□□□□ 0.26
LMNA-213ENST00000473598 PRPHP41219 470 aa16.68■□□□□ 0.26
LMNA-213ENST00000473598 SNRNP48Q6IEG0 339 aaKnown RBP16.68■□□□□ 0.26
LMNA-213ENST00000473598 TRERF1Q96PN7 1200 aa16.68■□□□□ 0.26
LMNA-213ENST00000473598 HOMER2Q9NSB8 354 aa16.68■□□□□ 0.26
LMNA-213ENST00000473598 MAP3K20Q9NYL2 800 aaKnown RBP16.68■□□□□ 0.26
LMNA-213ENST00000473598 HPSEQ9Y251 543 aa16.68■□□□□ 0.26
LMNA-213ENST00000473598 VWA3AA6NCI4 1184 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 GCFC2P16383 781 aaKnown RBP16.67■□□□□ 0.26
LMNA-213ENST00000473598 TM4SF4P48230 202 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 ARHGAP4P98171 946 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 PABPC4Q13310 644 aaKnown RBP eCLIP16.67■□□□□ 0.261e-9■■□□□ 12.7
LMNA-213ENST00000473598 IL17AQ16552 155 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 SPECC1Q5M775 1068 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 GPAT2Q6NUI2 795 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 LBX2Q6XYB7 198 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 FCHSD1Q86WN1 690 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 MB21D1Q8N884 522 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 TEX13BQ9BXU2 312 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 ASCC2Q9H1I8 757 aaPredicted RBP16.67■□□□□ 0.26
LMNA-213ENST00000473598 BCCIPQ9P287 314 aaKnown RBP eCLIP16.67■□□□□ 0.26
LMNA-213ENST00000473598 RIPK3Q9Y572 518 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 BTBD19C9JJ37 291 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 CETPP11597 493 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 SREBF2Q12772 1141 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 POTEEQ6S8J3 1075 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 MOXD1Q6UVY6 613 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 POTEDQ86YR6 584 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 IFNL1Q8IU54 200 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 RNF146Q9NTX7 359 aa16.67■□□□□ 0.26
LMNA-213ENST00000473598 CYP3A7-CYP3A51PA0A087WV96 503 aa16.66■□□□□ 0.26
LMNA-213ENST00000473598 TESPA1A2RU30 521 aaPredicted RBP16.66■□□□□ 0.26
LMNA-213ENST00000473598 SLC37A4O43826 429 aa16.66■□□□□ 0.26
LMNA-213ENST00000473598 TPM3P06753 285 aa16.66■□□□□ 0.26
LMNA-213ENST00000473598 OR52Z1P0C646 297 aa16.66■□□□□ 0.26
LMNA-213ENST00000473598 CYP3A7P24462 503 aa16.66■□□□□ 0.26
LMNA-213ENST00000473598 STAT3P40763 770 aa16.66■□□□□ 0.26
LMNA-213ENST00000473598 TKFCQ3LXA3 575 aa16.66■□□□□ 0.26
LMNA-213ENST00000473598 DTHD1Q6ZMT9 781 aa16.66■□□□□ 0.26
LMNA-213ENST00000473598 KRT222Q8N1A0 295 aa16.66■□□□□ 0.26
LMNA-213ENST00000473598 EHMT1Q9H9B1 1298 aa16.66■□□□□ 0.26
LMNA-213ENST00000473598 DDX25Q9UHL0 483 aaKnown RBP16.66■□□□□ 0.26
LMNA-213ENST00000473598 KINO60870 393 aaKnown RBP16.65■□□□□ 0.26
LMNA-213ENST00000473598 CYP3A4P08684 503 aa16.65■□□□□ 0.26
LMNA-213ENST00000473598 OSBPP22059 807 aa16.65■□□□□ 0.26
LMNA-213ENST00000473598 LONP1P36776 959 aaKnown RBP16.65■□□□□ 0.26
LMNA-213ENST00000473598 HERVK_113P62684 666 aa16.65■□□□□ 0.26
LMNA-213ENST00000473598 MBOAT7Q96N66 472 aa16.65■□□□□ 0.26
LMNA-213ENST00000473598 MTMR9Q96QG7 549 aa16.65■□□□□ 0.26
LMNA-213ENST00000473598 TSKSQ9UJT2 592 aa16.65■□□□□ 0.26
LMNA-213ENST00000473598 ZNF202O95125 648 aa16.65■□□□□ 0.26
LMNA-213ENST00000473598 SYKP43405 635 aa16.65■□□□□ 0.26
LMNA-213ENST00000473598 TYRO3Q06418 890 aa16.65■□□□□ 0.26
LMNA-213ENST00000473598 NCBP1Q09161 790 aaKnown RBP16.65■□□□□ 0.26
LMNA-213ENST00000473598 PLS1Q14651 629 aa16.65■□□□□ 0.26
LMNA-213ENST00000473598 CALCRLQ16602 461 aa16.65■□□□□ 0.26
LMNA-213ENST00000473598 CKAP2LQ8IYA6 745 aa16.65■□□□□ 0.26
LMNA-213ENST00000473598 WBP1LQ9NX94 342 aa16.65■□□□□ 0.26
LMNA-213ENST00000473598 BTBD7Q9P203 1132 aa16.65■□□□□ 0.26
LMNA-213ENST00000473598 KCNH3Q9ULD8 1083 aa16.65■□□□□ 0.26
LMNA-213ENST00000473598 TRPA1O75762 1119 aa16.64■□□□□ 0.25
LMNA-213ENST00000473598 CIITAP33076 1130 aa16.64■□□□□ 0.25
LMNA-213ENST00000473598 PSEN1P49768 467 aa16.64■□□□□ 0.25
LMNA-213ENST00000473598 RPS6P62753 249 aaKnown RBP16.64■□□□□ 0.25
LMNA-213ENST00000473598 RNF207Q6ZRF8 634 aa16.64■□□□□ 0.25
LMNA-213ENST00000473598 USP49Q70CQ1 688 aa16.64■□□□□ 0.25
LMNA-213ENST00000473598 RNF186Q9NXI6 227 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms