RNA–Protein interactions for RNA: ENST00000473480.5

A1CF-209, Transcript of APOBEC1 complementation factor, humanhuman

TSL 3

Gene A1CF, Length 813 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-209ENST00000473480 FXR1P51114 621 aaKnown RBP eCLIP9.7□□□□□ -0.86
A1CF-209ENST00000473480 CLEC16AQ2KHT3 1053 aa9.7□□□□□ -0.86
A1CF-209ENST00000473480 DALRD3Q5D0E6 543 aaKnown RBP9.7□□□□□ -0.86
A1CF-209ENST00000473480 TAB3Q8N5C8 712 aaPredicted RBP9.7□□□□□ -0.86
A1CF-209ENST00000473480 ZNF428Q96B54 188 aa9.7□□□□□ -0.86
A1CF-209ENST00000473480 ASIC4Q96FT7 647 aa9.7□□□□□ -0.86
A1CF-209ENST00000473480 CCSER2Q9H7U1 834 aa9.7□□□□□ -0.86
A1CF-209ENST00000473480 DUSP13Q9UII6 198 aa9.7□□□□□ -0.86
A1CF-209ENST00000473480 PASKQ96RG2 1323 aa9.7□□□□□ -0.86
A1CF-209ENST00000473480 USP47Q96K76 1375 aa9.7□□□□□ -0.86
A1CF-209ENST00000473480 QRICH2Q9H0J4 1663 aa9.7□□□□□ -0.86
A1CF-209ENST00000473480 A0A0C4DFX4 3053 aa9.69□□□□□ -0.86
A1CF-209ENST00000473480 PAPLNO95428 1278 aa9.69□□□□□ -0.86
A1CF-209ENST00000473480 C5P01031 1676 aa9.69□□□□□ -0.86
A1CF-209ENST00000473480 MMP10P09238 476 aa9.69□□□□□ -0.86
A1CF-209ENST00000473480 BRCA1P38398 1863 aaKnown RBP9.69□□□□□ -0.86
A1CF-209ENST00000473480 CUL9Q8IWT3 2517 aa9.69□□□□□ -0.86
A1CF-209ENST00000473480 ANKRD36BQ8N2N9 1353 aa9.69□□□□□ -0.86
A1CF-209ENST00000473480 ENOX1Q8TC92 643 aaKnown RBP9.69□□□□□ -0.86
A1CF-209ENST00000473480 DHRS1Q96LJ7 313 aa9.69□□□□□ -0.86
A1CF-209ENST00000473480 SLC6A18Q96N87 628 aa9.69□□□□□ -0.86
A1CF-209ENST00000473480 ALPK1Q96QP1 1244 aa9.69□□□□□ -0.86
A1CF-209ENST00000473480 CRBNQ96SW2 442 aa9.69□□□□□ -0.86
A1CF-209ENST00000473480 RGPD5Q99666 1765 aa9.69□□□□□ -0.86
A1CF-209ENST00000473480 NSD3Q9BZ95 1437 aa9.68□□□□□ -0.86
A1CF-209ENST00000473480 RBM25P49756 843 aaKnown RBP9.68□□□□□ -0.86
A1CF-209ENST00000473480 NMIQ13287 307 aaPredicted RBP9.68□□□□□ -0.86
A1CF-209ENST00000473480 NBPF9Q3BBW0 867 aa9.68□□□□□ -0.86
A1CF-209ENST00000473480 TMEM192Q8IY95 271 aa9.68□□□□□ -0.86
A1CF-209ENST00000473480 ACBD3Q9H3P7 528 aa9.68□□□□□ -0.86
A1CF-209ENST00000473480 CTNND2Q9UQB3 1225 aa9.68□□□□□ -0.86
A1CF-209ENST00000473480 CPSF1Q10570 1443 aaKnown RBP9.67□□□□□ -0.86
A1CF-209ENST00000473480 CASP8AP2Q9UKL3 1982 aa9.67□□□□□ -0.86
A1CF-209ENST00000473480 SHISA3A0PJX4 238 aa9.67□□□□□ -0.86
A1CF-209ENST00000473480 CA12O43570 354 aa9.67□□□□□ -0.86
A1CF-209ENST00000473480 ACRP10323 421 aa9.67□□□□□ -0.86
A1CF-209ENST00000473480 TCF3P15923 654 aa9.67□□□□□ -0.86
A1CF-209ENST00000473480 KCNA3P22001 575 aa9.67□□□□□ -0.86
A1CF-209ENST00000473480 ARHGEF25Q86VW2 580 aa9.67□□□□□ -0.86
A1CF-209ENST00000473480 SLAMF8Q9P0V8 285 aa9.67□□□□□ -0.86
A1CF-209ENST00000473480 INPP5FQ9Y2H2 1132 aa9.67□□□□□ -0.86
A1CF-209ENST00000473480 GUCY2CP25092 1073 aa9.66□□□□□ -0.86
A1CF-209ENST00000473480 ERCC5P28715 1186 aaPredicted RBP9.66□□□□□ -0.86
A1CF-209ENST00000473480 GDNFP39905 211 aa9.66□□□□□ -0.86
A1CF-209ENST00000473480 EGR3Q06889 387 aa9.66□□□□□ -0.86
A1CF-209ENST00000473480 CCDC81Q6ZN84 652 aa9.66□□□□□ -0.86
A1CF-209ENST00000473480 LSRQ86X29 649 aaPredicted RBP9.66□□□□□ -0.86
A1CF-209ENST00000473480 SYTL5Q8TDW5 730 aaPredicted RBP9.66□□□□□ -0.86
A1CF-209ENST00000473480 ZNF512BQ96KM6 892 aaPredicted RBP9.66□□□□□ -0.86
A1CF-209ENST00000473480 MKRN2Q9H000 416 aaKnown RBP9.66□□□□□ -0.86
A1CF-209ENST00000473480 SUCOQ9UBS9 1254 aaKnown RBP9.66□□□□□ -0.86
A1CF-209ENST00000473480 SLIT3O75094 1523 aa9.66□□□□□ -0.86
A1CF-209ENST00000473480 NSD2O96028 1365 aa9.65□□□□□ -0.86
A1CF-209ENST00000473480 ECE1P42892 770 aa9.65□□□□□ -0.86
A1CF-209ENST00000473480 EIF6P56537 245 aaKnown RBP9.65□□□□□ -0.86
A1CF-209ENST00000473480 SEC16BQ96JE7 1060 aa9.65□□□□□ -0.86
A1CF-209ENST00000473480 GPR101Q96P66 508 aaPredicted RBP9.65□□□□□ -0.86
A1CF-209ENST00000473480 ABT1Q9ULW3 272 aaKnown RBP9.65□□□□□ -0.86
A1CF-209ENST00000473480 RNF114Q9Y508 228 aa9.65□□□□□ -0.86
A1CF-209ENST00000473480 PCDHA11Q9Y5I1 949 aa9.65□□□□□ -0.86
A1CF-209ENST00000473480 KDM6AO15550 1401 aaPredicted RBP9.65□□□□□ -0.87
A1CF-209ENST00000473480 FAM86C2PA6NEL3 165 aa9.64□□□□□ -0.87
A1CF-209ENST00000473480 AFMP43652 599 aa9.64□□□□□ -0.87
A1CF-209ENST00000473480 NASPP49321 788 aaPredicted RBP9.64□□□□□ -0.87
A1CF-209ENST00000473480 AMIGO3Q86WK7 504 aa9.64□□□□□ -0.87
A1CF-209ENST00000473480 LDHDQ86WU2 507 aa9.64□□□□□ -0.87
A1CF-209ENST00000473480 DAGLBQ8NCG7 672 aa9.64□□□□□ -0.87
A1CF-209ENST00000473480 KCNH5Q8NCM2 988 aa9.64□□□□□ -0.87
A1CF-209ENST00000473480 SRRTQ9BXP5 876 aaKnown RBP9.64□□□□□ -0.87
A1CF-209ENST00000473480 HDAC8Q9BY41 377 aa9.64□□□□□ -0.87
A1CF-209ENST00000473480 TMEM59LQ9UK28 342 aa9.64□□□□□ -0.87
A1CF-209ENST00000473480 TAF1LQ8IZX4 1826 aa9.63□□□□□ -0.87
A1CF-209ENST00000473480 DNAJC25-GNG10A0A024R161 153 aa9.63□□□□□ -0.87
A1CF-209ENST00000473480 ZEB1P37275 1124 aaPredicted RBP9.63□□□□□ -0.87
A1CF-209ENST00000473480 PMS1P54277 932 aaKnown RBP9.63□□□□□ -0.87
A1CF-209ENST00000473480 RUFY4Q6ZNE9 571 aa9.63□□□□□ -0.87
A1CF-209ENST00000473480 TMC3Q7Z5M5 1100 aa9.63□□□□□ -0.87
A1CF-209ENST00000473480 ZNF655Q8N720 491 aaPredicted RBP9.63□□□□□ -0.87
A1CF-209ENST00000473480 OR6P1Q8NGX9 317 aa9.63□□□□□ -0.87
A1CF-209ENST00000473480 FAM168AQ92567 244 aa9.63□□□□□ -0.87
A1CF-209ENST00000473480 FMNL2Q96PY5 1086 aa9.63□□□□□ -0.87
A1CF-209ENST00000473480 PRDM14Q9GZV8 571 aa9.63□□□□□ -0.87
A1CF-209ENST00000473480 C19orf73Q9NVV2 129 aa9.63□□□□□ -0.87
A1CF-209ENST00000473480 PCDHB12Q9Y5F1 795 aa9.63□□□□□ -0.87
A1CF-209ENST00000473480 C4BP0C0L5 1744 aa9.62□□□□□ -0.87
A1CF-209ENST00000473480 UBR3Q6ZT12 1888 aa9.62□□□□□ -0.87
A1CF-209ENST00000473480 GIPRP48546 466 aa9.62□□□□□ -0.87
A1CF-209ENST00000473480 SNW1Q13573 536 aaKnown RBP9.62□□□□□ -0.87
A1CF-209ENST00000473480 RALGPS1Q5JS13 557 aa9.62□□□□□ -0.87
A1CF-209ENST00000473480 UNC5AQ6ZN44 842 aa9.62□□□□□ -0.87
A1CF-209ENST00000473480 TTC6Q86TZ1 520 aa9.62□□□□□ -0.87
A1CF-209ENST00000473480 NLGN1Q8N2Q7 840 aa9.62□□□□□ -0.87
A1CF-209ENST00000473480 SMARCC1Q92922 1105 aaPredicted RBP9.62□□□□□ -0.87
A1CF-209ENST00000473480 CAPNS2Q96L46 248 aa9.62□□□□□ -0.87
A1CF-209ENST00000473480 CDK19Q9BWU1 502 aa9.62□□□□□ -0.87
A1CF-209ENST00000473480 DOT1LQ8TEK3 1739 aa9.62□□□□□ -0.87
A1CF-209ENST00000473480 SIGLEC6O43699 453 aa9.61□□□□□ -0.87
A1CF-209ENST00000473480 MAP2K2P36507 400 aa9.61□□□□□ -0.87
A1CF-209ENST00000473480 GRM1Q13255 1194 aa9.61□□□□□ -0.87
A1CF-209ENST00000473480 AUHQ13825 339 aaKnown RBP9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms