RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 FNDC3BQ53EP0 1204 aaKnown RBP8.32□□□□□ -1.08
CLK1-209ENST00000472679 PAQR3Q6TCH7 311 aa8.32□□□□□ -1.08
CLK1-209ENST00000472679 KIAA0907Q7Z7F0 614 aaPredicted RBP8.32□□□□□ -1.08
CLK1-209ENST00000472679 ZNF605Q86T29 641 aa8.32□□□□□ -1.08
CLK1-209ENST00000472679 ZNF552Q9H707 407 aaPredicted RBP8.32□□□□□ -1.08
CLK1-209ENST00000472679 LRRC10BA6NIK2 292 aa8.31□□□□□ -1.08
CLK1-209ENST00000472679 F8W031 263 aaPredicted RBP8.31□□□□□ -1.08
CLK1-209ENST00000472679 ARVCFO00192 962 aa8.31□□□□□ -1.08
CLK1-209ENST00000472679 SDSP20132 328 aa8.31□□□□□ -1.08
CLK1-209ENST00000472679 GRK2P25098 689 aa8.31□□□□□ -1.08
CLK1-209ENST00000472679 GRK3P35626 688 aa8.31□□□□□ -1.08
CLK1-209ENST00000472679 YBX1P67809 324 aaKnown RBP8.31□□□□□ -1.08
CLK1-209ENST00000472679 PLEKHG4Q58EX7 1191 aa8.31□□□□□ -1.08
CLK1-209ENST00000472679 CABP7Q86V35 215 aa8.31□□□□□ -1.08
CLK1-209ENST00000472679 RIOX2Q8IUF8 465 aa8.31□□□□□ -1.08
CLK1-209ENST00000472679 SYNPOQ8N3V7 929 aa8.31□□□□□ -1.08
CLK1-209ENST00000472679 PCDH19Q8TAB3 1148 aa8.31□□□□□ -1.08
CLK1-209ENST00000472679 MAGEB10Q96LZ2 347 aaPredicted RBP8.31□□□□□ -1.08
CLK1-209ENST00000472679 KCNJ15Q99712 375 aa8.31□□□□□ -1.08
CLK1-209ENST00000472679 LOC105371045A0A1W2PR82 267 aa8.3□□□□□ -1.08
CLK1-209ENST00000472679 DNAJC8O75937 253 aaPredicted RBP8.3□□□□□ -1.08
CLK1-209ENST00000472679 VIPR1P32241 457 aa8.3□□□□□ -1.08
CLK1-209ENST00000472679 PAK1Q13153 545 aa8.3□□□□□ -1.08
CLK1-209ENST00000472679 PLEKHN1Q494U1 663 aaPredicted RBP8.3□□□□□ -1.08
CLK1-209ENST00000472679 MROH9Q5TGP6 573 aa8.3□□□□□ -1.08
CLK1-209ENST00000472679 NETO2Q8NC67 525 aa8.3□□□□□ -1.08
CLK1-209ENST00000472679 FEZ1Q99689 392 aa8.3□□□□□ -1.08
CLK1-209ENST00000472679 ALG1Q9BT22 464 aa8.3□□□□□ -1.08
CLK1-209ENST00000472679 FAM53CQ9NYF3 392 aa8.3□□□□□ -1.08
CLK1-209ENST00000472679 PLA2G2DQ9UNK4 145 aa8.3□□□□□ -1.08
CLK1-209ENST00000472679 MYOCOSA0A1B0GUC4 107 aa8.29□□□□□ -1.08
CLK1-209ENST00000472679 TCRBV16S1A1N1A0A5B0 115 aa8.29□□□□□ -1.08
CLK1-209ENST00000472679 RFPL3O75679 317 aa8.29□□□□□ -1.08
CLK1-209ENST00000472679 SRGAP2CP0DJJ0 459 aa8.29□□□□□ -1.08
CLK1-209ENST00000472679 COL6A2P12110 1019 aa8.29□□□□□ -1.08
CLK1-209ENST00000472679 HSD3B2P26439 372 aa8.29□□□□□ -1.08
CLK1-209ENST00000472679 PRR5P85299 388 aa8.29□□□□□ -1.08
CLK1-209ENST00000472679 NR1I3Q14994 352 aa8.29□□□□□ -1.08
CLK1-209ENST00000472679 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.29□□□□□ -1.08
CLK1-209ENST00000472679 EPB41L4BQ9H329 900 aa8.29□□□□□ -1.08
CLK1-209ENST00000472679 BCAS3Q9H6U6 928 aa8.29□□□□□ -1.08
CLK1-209ENST00000472679 DCP1AQ9NPI6 582 aaPredicted RBP8.29□□□□□ -1.08
CLK1-209ENST00000472679 COA3Q9Y2R0 106 aaPredicted RBP8.29□□□□□ -1.08
CLK1-209ENST00000472679 FAM47E-STBD1D6RA91 191 aa8.28□□□□□ -1.08
CLK1-209ENST00000472679 SGSM2O43147 1006 aa8.28□□□□□ -1.08
CLK1-209ENST00000472679 KCNA6P17658 529 aa8.28□□□□□ -1.08
CLK1-209ENST00000472679 MAPKAPK2P49137 400 aa8.28□□□□□ -1.08
CLK1-209ENST00000472679 DALRD3Q5D0E6 543 aaKnown RBP8.28□□□□□ -1.08
CLK1-209ENST00000472679 ABHD17CQ6PCB6 329 aa8.28□□□□□ -1.08
CLK1-209ENST00000472679 EPB41L1Q9H4G0 881 aa8.28□□□□□ -1.08
CLK1-209ENST00000472679 CADPSQ9ULU8 1353 aa8.27□□□□□ -1.09
CLK1-209ENST00000472679 DGKIO75912 1065 aa8.27□□□□□ -1.09
CLK1-209ENST00000472679 SRSF3P84103 164 aaKnown RBP8.27□□□□□ -1.09
CLK1-209ENST00000472679 ZNF460Q14592 562 aa8.27□□□□□ -1.09
CLK1-209ENST00000472679 TMC6Q7Z403 805 aa8.27□□□□□ -1.09
CLK1-209ENST00000472679 ZC3H7AQ8IWR0 971 aaKnown RBP8.27□□□□□ -1.09
CLK1-209ENST00000472679 DHX37Q8IY37 1157 aaKnown RBP8.27□□□□□ -1.09
CLK1-209ENST00000472679 PIP4K2CQ8TBX8 421 aa8.27□□□□□ -1.09
CLK1-209ENST00000472679 MCOLN1Q9GZU1 580 aa8.27□□□□□ -1.09
CLK1-209ENST00000472679 DBR1Q9UK59 544 aaKnown RBP8.27□□□□□ -1.09
CLK1-209ENST00000472679 TNPO3Q9Y5L0 923 aaKnown RBP8.27□□□□□ -1.09
CLK1-209ENST00000472679 IRS4O14654 1257 aaPredicted RBP8.26□□□□□ -1.09
CLK1-209ENST00000472679 WNT9AO14904 365 aa8.26□□□□□ -1.09
CLK1-209ENST00000472679 CKMP06732 381 aa8.26□□□□□ -1.09
CLK1-209ENST00000472679 PYGMP11217 842 aa8.26□□□□□ -1.09
CLK1-209ENST00000472679 SLC6A11P48066 632 aa8.26□□□□□ -1.09
CLK1-209ENST00000472679 GYS2P54840 703 aa8.26□□□□□ -1.09
CLK1-209ENST00000472679 RBM10P98175 930 aaKnown RBP8.26□□□□□ -1.09
CLK1-209ENST00000472679 EGFLAMQ63HQ2 1017 aa8.26□□□□□ -1.09
CLK1-209ENST00000472679 ZC3H14Q6PJT7 736 aaKnown RBP8.26□□□□□ -1.09
CLK1-209ENST00000472679 OTOP3Q7RTS5 596 aa8.26□□□□□ -1.09
CLK1-209ENST00000472679 DCP2Q8IU60 420 aaKnown RBP8.26□□□□□ -1.09
CLK1-209ENST00000472679 NINJ1Q92982 152 aa8.26□□□□□ -1.09
CLK1-209ENST00000472679 PEX11GQ96HA9 241 aa8.26□□□□□ -1.09
CLK1-209ENST00000472679 PALD1Q9ULE6 856 aa8.26□□□□□ -1.09
CLK1-209ENST00000472679 CBLCQ9ULV8 474 aa8.26□□□□□ -1.09
CLK1-209ENST00000472679 COQ6Q9Y2Z9 468 aa8.26□□□□□ -1.09
CLK1-209ENST00000472679 HRKO00198 91 aa8.25□□□□□ -1.09
CLK1-209ENST00000472679 ABLIM1O14639 778 aa8.25□□□□□ -1.09
CLK1-209ENST00000472679 NKRFO15226 690 aaKnown RBP eCLIP8.25□□□□□ -1.09
CLK1-209ENST00000472679 NAT1P18440 290 aa8.25□□□□□ -1.09
CLK1-209ENST00000472679 MESP2Q0VG99 397 aa8.25□□□□□ -1.09
CLK1-209ENST00000472679 HABP4Q5JVS0 413 aaKnown RBP8.25□□□□□ -1.09
CLK1-209ENST00000472679 STEAP3Q658P3 488 aa8.25□□□□□ -1.09
CLK1-209ENST00000472679 NIM1KQ8IY84 436 aa8.25□□□□□ -1.09
CLK1-209ENST00000472679 SEC14L1Q92503 715 aa8.25□□□□□ -1.09
CLK1-209ENST00000472679 FBXW5Q969U6 566 aa8.25□□□□□ -1.09
CLK1-209ENST00000472679 SGPP1Q9BX95 441 aa8.25□□□□□ -1.09
CLK1-209ENST00000472679 NUDT5Q9UKK9 219 aa8.25□□□□□ -1.09
CLK1-209ENST00000472679 RNF114Q9Y508 228 aa8.25□□□□□ -1.09
CLK1-209ENST00000472679 TCRBV5S4A2TA0A5A2 114 aa8.24□□□□□ -1.09
CLK1-209ENST00000472679 CCDC66A2RUB6 948 aa8.24□□□□□ -1.09
CLK1-209ENST00000472679 PEX10O60683 326 aa8.24□□□□□ -1.09
CLK1-209ENST00000472679 TADA3O75528 432 aa8.24□□□□□ -1.09
CLK1-209ENST00000472679 GNAT1P11488 350 aa8.24□□□□□ -1.09
CLK1-209ENST00000472679 DNM2P50570 870 aa8.24□□□□□ -1.09
CLK1-209ENST00000472679 ZNF200P98182 395 aaPredicted RBP8.24□□□□□ -1.09
CLK1-209ENST00000472679 TMEM62Q0P6H9 643 aa8.24□□□□□ -1.09
CLK1-209ENST00000472679 EMC4Q5J8M3 183 aa8.24□□□□□ -1.09
CLK1-209ENST00000472679 RBM12BQ8IXT5 1001 aaKnown RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms